RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 RGPD8O14715 1765 aaPredicted RBP10.08□□□□□ -0.8
RTFDC1-206ENST00000477485 SOS2Q07890 1332 aaPredicted RBP10.07□□□□□ -0.8
RTFDC1-206ENST00000477485 IFT172Q9UG01 1749 aa10.07□□□□□ -0.8
RTFDC1-206ENST00000477485 BRWD3Q6RI45 1802 aa10.07□□□□□ -0.8
RTFDC1-206ENST00000477485 HFM1A2PYH4 1435 aa10.07□□□□□ -0.8
RTFDC1-206ENST00000477485 NAIPQ13075 1403 aa10.07□□□□□ -0.8
RTFDC1-206ENST00000477485 PLEKHG5O94827 1062 aa10.06□□□□□ -0.8
RTFDC1-206ENST00000477485 SLC4A1APQ9BWU0 796 aaKnown RBP10.06□□□□□ -0.8
RTFDC1-206ENST00000477485 STK26Q9P289 416 aa10.06□□□□□ -0.8
RTFDC1-206ENST00000477485 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.06□□□□□ -0.8
RTFDC1-206ENST00000477485 ATRNO75882 1429 aa10.06□□□□□ -0.8
RTFDC1-206ENST00000477485 NPHP3Q7Z494 1330 aa10.06□□□□□ -0.8
RTFDC1-206ENST00000477485 KIF1AQ12756 1690 aa10.06□□□□□ -0.8
RTFDC1-206ENST00000477485 KNDC1Q76NI1 1749 aa10.05□□□□□ -0.8
RTFDC1-206ENST00000477485 FMN2Q9NZ56 1722 aa10.05□□□□□ -0.8
RTFDC1-206ENST00000477485 ADRA2BP18089 450 aa10.05□□□□□ -0.8
RTFDC1-206ENST00000477485 ZRANB1Q9UGI0 708 aa10.05□□□□□ -0.8
RTFDC1-206ENST00000477485 PXDNQ92626 1479 aa10.04□□□□□ -0.8
RTFDC1-206ENST00000477485 PLCH1Q4KWH8 1693 aa10.04□□□□□ -0.8
RTFDC1-206ENST00000477485 FOXO3O43524 673 aa10.04□□□□□ -0.8
RTFDC1-206ENST00000477485 HAP1P54257 671 aaPredicted RBP10.04□□□□□ -0.8
RTFDC1-206ENST00000477485 RPGRIP1LQ68CZ1 1315 aa10.04□□□□□ -0.8
RTFDC1-206ENST00000477485 MYOM2P54296 1465 aa10.04□□□□□ -0.8
RTFDC1-206ENST00000477485 RGL3Q3MIN7 710 aa10.03□□□□□ -0.8
RTFDC1-206ENST00000477485 FNBP4Q8N3X1 1017 aaPredicted RBP10.03□□□□□ -0.8
RTFDC1-206ENST00000477485 RRBP1Q9P2E9 1410 aaKnown RBP10.03□□□□□ -0.8
RTFDC1-206ENST00000477485 USP32Q8NFA0 1604 aa10.03□□□□□ -0.8
RTFDC1-206ENST00000477485 LRPPRCP42704 1394 aaKnown RBP10.02□□□□□ -0.8
RTFDC1-206ENST00000477485 CCDC144AA2RUR9 1427 aa10.02□□□□□ -0.81
RTFDC1-206ENST00000477485 WAPLQ7Z5K2 1190 aa10.02□□□□□ -0.81
RTFDC1-206ENST00000477485 ABCA3Q99758 1704 aa10.02□□□□□ -0.81
RTFDC1-206ENST00000477485 PRAG1Q86YV5 1406 aa10.01□□□□□ -0.81
RTFDC1-206ENST00000477485 CCDC9Q9Y3X0 531 aaKnown RBP10.01□□□□□ -0.81
RTFDC1-206ENST00000477485 BCL9LQ86UU0 1499 aa10.01□□□□□ -0.81
RTFDC1-206ENST00000477485 ADGRF5Q8IZF2 1346 aa10.01□□□□□ -0.81
RTFDC1-206ENST00000477485 GLI3P10071 1580 aa10.01□□□□□ -0.81
RTFDC1-206ENST00000477485 TMEM132EQ6IEE7 984 aa10□□□□□ -0.81
RTFDC1-206ENST00000477485 LMOD2Q6P5Q4 547 aa10□□□□□ -0.81
RTFDC1-206ENST00000477485 GJD4Q96KN9 370 aaPredicted RBP10□□□□□ -0.81
RTFDC1-206ENST00000477485 NWD2Q9ULI1 1742 aa9.99□□□□□ -0.81
RTFDC1-206ENST00000477485 RALGAPBQ86X10 1494 aa9.99□□□□□ -0.81
RTFDC1-206ENST00000477485 A0A0G2JS52 829 aa9.99□□□□□ -0.81
RTFDC1-206ENST00000477485 MYT1Q01538 1121 aa9.99□□□□□ -0.81
RTFDC1-206ENST00000477485 SF3B2Q13435 895 aaKnown RBP9.99□□□□□ -0.81
RTFDC1-206ENST00000477485 PLEKHH1Q9ULM0 1364 aa9.99□□□□□ -0.81
RTFDC1-206ENST00000477485 EP400Q96L91 3159 aa9.98□□□□□ -0.81
RTFDC1-206ENST00000477485 CCDC125Q86Z20 511 aa9.98□□□□□ -0.81
RTFDC1-206ENST00000477485 UNC5CLQ8IV45 518 aa9.98□□□□□ -0.81
RTFDC1-206ENST00000477485 SAFB2Q14151 953 aaKnown RBP eCLIP9.97□□□□□ -0.81
RTFDC1-206ENST00000477485 KRT28Q7Z3Y7 464 aa9.97□□□□□ -0.81
RTFDC1-206ENST00000477485 BLMP54132 1417 aaPredicted RBP9.97□□□□□ -0.81
RTFDC1-206ENST00000477485 YTHDC2Q9H6S0 1430 aaKnown RBP9.97□□□□□ -0.81
RTFDC1-206ENST00000477485 CABLES1Q8TDN4 633 aa9.96□□□□□ -0.82
RTFDC1-206ENST00000477485 SPATA31A3Q5VYP0 1347 aa9.96□□□□□ -0.82
RTFDC1-206ENST00000477485 ANKRD30BQ9BXX2 1392 aa9.96□□□□□ -0.82
RTFDC1-206ENST00000477485 TECPR2O15040 1411 aa9.96□□□□□ -0.82
RTFDC1-206ENST00000477485 TNS3Q68CZ2 1445 aa9.96□□□□□ -0.82
RTFDC1-206ENST00000477485 SLIT2O94813 1529 aa9.96□□□□□ -0.82
RTFDC1-206ENST00000477485 DEFB132Q7Z7B7 95 aa9.95□□□□□ -0.82
RTFDC1-206ENST00000477485 PIK3C2GO75747 1445 aa9.95□□□□□ -0.82
RTFDC1-206ENST00000477485 RGPD1P0DJD0 1748 aa9.94□□□□□ -0.82
RTFDC1-206ENST00000477485 NRAPQ86VF7 1730 aa9.94□□□□□ -0.82
RTFDC1-206ENST00000477485 SPATA31E1Q6ZUB1 1445 aa9.94□□□□□ -0.82
RTFDC1-206ENST00000477485 PSME1Q06323 249 aa9.94□□□□□ -0.82
RTFDC1-206ENST00000477485 SEPT12Q8IYM1 358 aa9.94□□□□□ -0.82
RTFDC1-206ENST00000477485 PHF8Q9UPP1 1060 aa9.94□□□□□ -0.82
RTFDC1-206ENST00000477485 ABCC11Q96J66 1382 aa9.93□□□□□ -0.82
RTFDC1-206ENST00000477485 DHX57Q6P158 1386 aaKnown RBP9.92□□□□□ -0.82
RTFDC1-206ENST00000477485 PMFBP1Q8TBY8 1022 aa9.92□□□□□ -0.82
RTFDC1-206ENST00000477485 MPHOSPH9Q99550 1183 aa9.92□□□□□ -0.82
RTFDC1-206ENST00000477485 POGKQ9P215 609 aa9.92□□□□□ -0.82
RTFDC1-206ENST00000477485 COL14A1Q05707 1796 aaKnown RBP9.92□□□□□ -0.82
RTFDC1-206ENST00000477485 TRPM3Q9HCF6 1732 aaPredicted RBP9.92□□□□□ -0.82
RTFDC1-206ENST00000477485 LRP5O75197 1615 aa9.92□□□□□ -0.82
RTFDC1-206ENST00000477485 NRXN1Q9ULB1 1477 aa9.91□□□□□ -0.82
RTFDC1-206ENST00000477485 ARHGEF10O15013 1369 aa9.91□□□□□ -0.82
RTFDC1-206ENST00000477485 PSDA5PKW4 1024 aaPredicted RBP9.91□□□□□ -0.82
RTFDC1-206ENST00000477485 VPS72Q15906 364 aa9.91□□□□□ -0.82
RTFDC1-206ENST00000477485 CFAP70Q5T0N1 1121 aa9.91□□□□□ -0.82
RTFDC1-206ENST00000477485 KRT27Q7Z3Y8 459 aa9.91□□□□□ -0.82
RTFDC1-206ENST00000477485 PRAM1Q96QH2 718 aa9.91□□□□□ -0.82
RTFDC1-206ENST00000477485 ITSN1Q15811 1721 aa9.9□□□□□ -0.82
RTFDC1-206ENST00000477485 SRCAPQ6ZRS2 3230 aa9.9□□□□□ -0.82
RTFDC1-206ENST00000477485 ALS2Q96Q42 1657 aa9.9□□□□□ -0.82
RTFDC1-206ENST00000477485 ADGRB2O60241 1585 aa9.9□□□□□ -0.82
RTFDC1-206ENST00000477485 BAG6P46379 1132 aa9.9□□□□□ -0.82
RTFDC1-206ENST00000477485 FAM98CQ17RN3 349 aaKnown RBP9.9□□□□□ -0.82
RTFDC1-206ENST00000477485 SBNO1A3KN83 1393 aa9.89□□□□□ -0.83
RTFDC1-206ENST00000477485 HIRIP3Q9BW71 556 aaPredicted RBP9.89□□□□□ -0.83
RTFDC1-206ENST00000477485 TNS1Q9HBL0 1735 aaKnown RBP9.89□□□□□ -0.83
RTFDC1-206ENST00000477485 CRYBG1Q9Y4K1 1723 aa9.88□□□□□ -0.83
RTFDC1-206ENST00000477485 PAK3O75914 559 aaPredicted RBP9.88□□□□□ -0.83
RTFDC1-206ENST00000477485 C14orf93Q9H972 538 aaKnown RBP9.88□□□□□ -0.83
RTFDC1-206ENST00000477485 BTG4Q9NY30 223 aa9.88□□□□□ -0.83
RTFDC1-206ENST00000477485 GPRASP1Q5JY77 1395 aa9.88□□□□□ -0.83
RTFDC1-206ENST00000477485 MINK1Q8N4C8 1332 aaPredicted RBP9.87□□□□□ -0.83
RTFDC1-206ENST00000477485 FAM83GA6ND36 823 aa9.87□□□□□ -0.83
RTFDC1-206ENST00000477485 FAM182BQ5T319 152 aa9.87□□□□□ -0.83
RTFDC1-206ENST00000477485 ANKARQ7Z5J8 1434 aa9.87□□□□□ -0.83
RTFDC1-206ENST00000477485 DLC1Q96QB1 1528 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms