RNA–Protein interactions for RNA: ENST00000477468.1

MKL1-209, Transcript of MKL/myocardin-like protein 1, humanhuman

TSL 2

Gene MKL1, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKL1-209ENST00000477468 DCCP43146 1447 aa13.04□□□□□ -0.32
MKL1-209ENST00000477468 NCOA3Q9Y6Q9 1424 aa13.04□□□□□ -0.32
MKL1-209ENST00000477468 USP32Q8NFA0 1604 aa13.03□□□□□ -0.32
MKL1-209ENST00000477468 SIRT1Q96EB6 747 aa13.03□□□□□ -0.32
MKL1-209ENST00000477468 PRAM1Q96QH2 718 aa13.03□□□□□ -0.32
MKL1-209ENST00000477468 LRRC7Q96NW7 1537 aa13.03□□□□□ -0.32
MKL1-209ENST00000477468 KIF1AQ12756 1690 aa13.02□□□□□ -0.32
MKL1-209ENST00000477468 ST20-MTHFSA0A0A6YYL1 179 aa13.02□□□□□ -0.33
MKL1-209ENST00000477468 SLC24A1O60721 1099 aa13.02□□□□□ -0.33
MKL1-209ENST00000477468 POGKQ9P215 609 aa13.02□□□□□ -0.33
MKL1-209ENST00000477468 DISP3Q9P2K9 1392 aa13.01□□□□□ -0.33
MKL1-209ENST00000477468 ATP7BP35670 1465 aa13.01□□□□□ -0.33
MKL1-209ENST00000477468 RGPD8O14715 1765 aaPredicted RBP13□□□□□ -0.33
MKL1-209ENST00000477468 AKAP12Q02952 1782 aa13□□□□□ -0.33
MKL1-209ENST00000477468 ZNF335Q9H4Z2 1342 aaPredicted RBP13□□□□□ -0.33
MKL1-209ENST00000477468 TESK2Q96S53 571 aa13□□□□□ -0.33
MKL1-209ENST00000477468 MON2Q7Z3U7 1717 aa12.99□□□□□ -0.33
MKL1-209ENST00000477468 TMF1P82094 1093 aa12.99□□□□□ -0.33
MKL1-209ENST00000477468 ANKARQ7Z5J8 1434 aa12.98□□□□□ -0.33
MKL1-209ENST00000477468 TMEM94Q12767 1356 aa12.98□□□□□ -0.33
MKL1-209ENST00000477468 NRKQ7Z2Y5 1582 aa12.98□□□□□ -0.33
MKL1-209ENST00000477468 IQSEC2Q5JU85 1478 aa12.97□□□□□ -0.33
MKL1-209ENST00000477468 ATAD2Q6PL18 1390 aa12.97□□□□□ -0.33
MKL1-209ENST00000477468 CCDC7Q96M83 1385 aa12.97□□□□□ -0.33
MKL1-209ENST00000477468 NINLQ9Y2I6 1382 aa12.97□□□□□ -0.33
MKL1-209ENST00000477468 EVC2Q86UK5 1308 aa12.97□□□□□ -0.33
MKL1-209ENST00000477468 MINK1Q8N4C8 1332 aaPredicted RBP12.97□□□□□ -0.33
MKL1-209ENST00000477468 SAFB2Q14151 953 aaKnown RBP eCLIP12.97□□□□□ -0.33
MKL1-209ENST00000477468 CDCA8Q53HL2 280 aa12.97□□□□□ -0.33
MKL1-209ENST00000477468 MSH6P52701 1360 aa12.96□□□□□ -0.33
MKL1-209ENST00000477468 WAPLQ7Z5K2 1190 aa12.96□□□□□ -0.33
MKL1-209ENST00000477468 HIRIP3Q9BW71 556 aaPredicted RBP12.96□□□□□ -0.33
MKL1-209ENST00000477468 KIF20BQ96Q89 1820 aa12.95□□□□□ -0.34
MKL1-209ENST00000477468 ZNF316A6NFI3 1004 aaPredicted RBP12.95□□□□□ -0.34
MKL1-209ENST00000477468 KIF7Q2M1P5 1343 aa12.94□□□□□ -0.34
MKL1-209ENST00000477468 PROSER2Q86WR7 435 aaPredicted RBP12.94□□□□□ -0.34
MKL1-209ENST00000477468 ANKRD26Q9UPS8 1709 aa12.93□□□□□ -0.34
MKL1-209ENST00000477468 C14orf37Q86TY3 774 aa12.93□□□□□ -0.34
MKL1-209ENST00000477468 WASHC2AQ641Q2 1341 aa12.92□□□□□ -0.34
MKL1-209ENST00000477468 MST1RQ04912 1400 aa12.92□□□□□ -0.34
MKL1-209ENST00000477468 PUS7Q96PZ0 661 aaKnown RBP12.92□□□□□ -0.34
MKL1-209ENST00000477468 NHSL1Q5SYE7 1610 aa12.91□□□□□ -0.34
MKL1-209ENST00000477468 PPIP5K1Q6PFW1 1433 aa12.91□□□□□ -0.34
MKL1-209ENST00000477468 WASLO00401 505 aaPredicted RBP12.91□□□□□ -0.34
MKL1-209ENST00000477468 SRPK2P78362 688 aaKnown RBP12.91□□□□□ -0.34
MKL1-209ENST00000477468 USP54Q70EL1 1684 aa12.89□□□□□ -0.35
MKL1-209ENST00000477468 ROBO1Q9Y6N7 1651 aa12.89□□□□□ -0.35
MKL1-209ENST00000477468 C19orf44Q9H6X5 657 aa12.88□□□□□ -0.35
MKL1-209ENST00000477468 ANKRD36BQ8N2N9 1353 aa12.88□□□□□ -0.35
MKL1-209ENST00000477468 C1orf167Q5SNV9 1468 aa12.88□□□□□ -0.35
MKL1-209ENST00000477468 TRPM3Q9HCF6 1732 aaPredicted RBP12.88□□□□□ -0.35
MKL1-209ENST00000477468 CD163L1Q9NR16 1453 aa12.87□□□□□ -0.35
MKL1-209ENST00000477468 C11orf95C9JLR9 678 aaPredicted RBP12.87□□□□□ -0.35
MKL1-209ENST00000477468 CADPS2Q86UW7 1296 aa12.87□□□□□ -0.35
MKL1-209ENST00000477468 RBM33Q96EV2 1170 aaKnown RBP12.87□□□□□ -0.35
MKL1-209ENST00000477468 POLR3GLQ9BT43 218 aa12.87□□□□□ -0.35
MKL1-209ENST00000477468 CDK19Q9BWU1 502 aa12.87□□□□□ -0.35
MKL1-209ENST00000477468 PRR36Q9H6K5 1346 aa12.87□□□□□ -0.35
MKL1-209ENST00000477468 CABP2Q9NPB3 220 aa12.86□□□□□ -0.35
MKL1-209ENST00000477468 A0A1W2PP64 1363 aa12.85□□□□□ -0.35
MKL1-209ENST00000477468 ATF3P18847 181 aa12.85□□□□□ -0.35
MKL1-209ENST00000477468 AHDC1Q5TGY3 1603 aaPredicted RBP12.84□□□□□ -0.35
MKL1-209ENST00000477468 PIK3C2AO00443 1686 aa12.84□□□□□ -0.35
MKL1-209ENST00000477468 ALS2Q96Q42 1657 aa12.83□□□□□ -0.35
MKL1-209ENST00000477468 POLR3AO14802 1390 aaPredicted RBP12.83□□□□□ -0.36
MKL1-209ENST00000477468 CPSF1Q10570 1443 aaKnown RBP12.83□□□□□ -0.36
MKL1-209ENST00000477468 NUDT16Q96DE0 195 aaKnown RBP12.83□□□□□ -0.36
MKL1-209ENST00000477468 CCDC61Q9Y6R9 512 aa12.83□□□□□ -0.36
MKL1-209ENST00000477468 MARF1Q9Y4F3 1742 aaKnown RBP12.82□□□□□ -0.36
MKL1-209ENST00000477468 USP6P35125 1406 aa12.82□□□□□ -0.36
MKL1-209ENST00000477468 EDC4Q6P2E9 1401 aaKnown RBP12.82□□□□□ -0.36
MKL1-209ENST00000477468 NSD3Q9BZ95 1437 aa12.82□□□□□ -0.36
MKL1-209ENST00000477468 PHLPP1O60346 1717 aa12.82□□□□□ -0.36
MKL1-209ENST00000477468 ABCA3Q99758 1704 aa12.82□□□□□ -0.36
MKL1-209ENST00000477468 TMC1Q8TDI8 760 aa12.81□□□□□ -0.36
MKL1-209ENST00000477468 CRYBG1Q9Y4K1 1723 aa12.81□□□□□ -0.36
MKL1-209ENST00000477468 NUTM2FA1L443 756 aa12.8□□□□□ -0.36
MKL1-209ENST00000477468 TERF2IPQ9NYB0 399 aa12.8□□□□□ -0.36
MKL1-209ENST00000477468 MED1Q15648 1581 aaPredicted RBP12.8□□□□□ -0.36
MKL1-209ENST00000477468 PHRF1Q9P1Y6 1649 aaKnown RBP12.8□□□□□ -0.36
MKL1-209ENST00000477468 BRD4O60885 1362 aaPredicted RBP12.8□□□□□ -0.36
MKL1-209ENST00000477468 KTN1Q86UP2 1357 aaKnown RBP12.8□□□□□ -0.36
MKL1-209ENST00000477468 PXDNQ92626 1479 aa12.79□□□□□ -0.36
MKL1-209ENST00000477468 HDGFL2Q7Z4V5 671 aaPredicted RBP12.79□□□□□ -0.36
MKL1-209ENST00000477468 COL16A1Q07092 1604 aaPredicted RBP12.79□□□□□ -0.36
MKL1-209ENST00000477468 NSD2O96028 1365 aa12.79□□□□□ -0.36
MKL1-209ENST00000477468 PHF8Q9UPP1 1060 aa12.78□□□□□ -0.36
MKL1-209ENST00000477468 PLEKHG3A1L390 1219 aa12.77□□□□□ -0.37
MKL1-209ENST00000477468 DDX10Q13206 875 aaKnown RBP12.77□□□□□ -0.37
MKL1-209ENST00000477468 SLC12A5Q9H2X9 1139 aa12.77□□□□□ -0.37
MKL1-209ENST00000477468 CABP1Q9NZU7 370 aa12.77□□□□□ -0.37
MKL1-209ENST00000477468 ESCO1Q5FWF5 840 aa12.76□□□□□ -0.37
MKL1-209ENST00000477468 ACEP12821 1306 aa12.76□□□□□ -0.37
MKL1-209ENST00000477468 NPHP3Q7Z494 1330 aa12.76□□□□□ -0.37
MKL1-209ENST00000477468 NPC1L1Q9UHC9 1359 aa12.76□□□□□ -0.37
MKL1-209ENST00000477468 SSH2Q76I76 1423 aa12.76□□□□□ -0.37
MKL1-209ENST00000477468 COL22A1Q8NFW1 1626 aaPredicted RBP12.76□□□□□ -0.37
MKL1-209ENST00000477468 SHPRHQ149N8 1683 aa12.75□□□□□ -0.37
MKL1-209ENST00000477468 TNS3Q68CZ2 1445 aa12.75□□□□□ -0.37
MKL1-209ENST00000477468 NGDNQ8NEJ9 315 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms