RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 WAPLQ7Z5K2 1190 aa25.17■■□□□ 1.62
SMARCD3-210ENST00000477169 NRXN1Q9ULB1 1477 aa25.16■■□□□ 1.62
SMARCD3-210ENST00000477169 MYOM2P54296 1465 aa25.15■■□□□ 1.62
SMARCD3-210ENST00000477169 SIRT1Q96EB6 747 aa25.15■■□□□ 1.62
SMARCD3-210ENST00000477169 YTHDC2Q9H6S0 1430 aaKnown RBP25.14■■□□□ 1.62
SMARCD3-210ENST00000477169 NUTM2BA6NNL0 878 aaPredicted RBP25.14■■□□□ 1.62
SMARCD3-210ENST00000477169 NUTM2EB1AL46 878 aaPredicted RBP25.14■■□□□ 1.62
SMARCD3-210ENST00000477169 NUTM2AQ8IVF1 878 aaPredicted RBP25.14■■□□□ 1.62
SMARCD3-210ENST00000477169 LAMC1P11047 1609 aa25.14■■□□□ 1.61
SMARCD3-210ENST00000477169 KNDC1Q76NI1 1749 aa25.14■■□□□ 1.61
SMARCD3-210ENST00000477169 CDC42BPGQ6DT37 1551 aa25.14■■□□□ 1.61
SMARCD3-210ENST00000477169 CFAP70Q5T0N1 1121 aa25.13■■□□□ 1.61
SMARCD3-210ENST00000477169 ZNF772Q68DY9 489 aaPredicted RBP25.13■■□□□ 1.61
SMARCD3-210ENST00000477169 SOS2Q07890 1332 aaPredicted RBP25.12■■□□□ 1.61
SMARCD3-210ENST00000477169 DHX57Q6P158 1386 aaKnown RBP25.12■■□□□ 1.61
SMARCD3-210ENST00000477169 PNPLA6Q8IY17 1366 aa25.11■■□□□ 1.61
SMARCD3-210ENST00000477169 ESCO1Q5FWF5 840 aa25.1■■□□□ 1.61
SMARCD3-210ENST00000477169 PLEKHH1Q9ULM0 1364 aa25.09■■□□□ 1.61
SMARCD3-210ENST00000477169 STAC3Q96MF2 364 aa25.07■■□□□ 1.6
SMARCD3-210ENST00000477169 NPHP3Q7Z494 1330 aa25.06■■□□□ 1.6
SMARCD3-210ENST00000477169 DCAF11Q8TEB1 546 aa25.04■■□□□ 1.6
SMARCD3-210ENST00000477169 NUTM2FA1L443 756 aa25.03■■□□□ 1.6
SMARCD3-210ENST00000477169 KDM2AQ9Y2K7 1162 aa25.03■■□□□ 1.6
SMARCD3-210ENST00000477169 AFF2P51816 1311 aa25.02■■□□□ 1.6
SMARCD3-210ENST00000477169 FOXO3O43524 673 aa25.01■■□□□ 1.59
SMARCD3-210ENST00000477169 C8orf37Q96NL8 207 aa25■■□□□ 1.59
SMARCD3-210ENST00000477169 PRAM1Q96QH2 718 aa25■■□□□ 1.59
SMARCD3-210ENST00000477169 FMN2Q9NZ56 1722 aa24.99■■□□□ 1.59
SMARCD3-210ENST00000477169 DLC1Q96QB1 1528 aa24.98■■□□□ 1.59
SMARCD3-210ENST00000477169 RXRBP28702 533 aa24.98■■□□□ 1.59
SMARCD3-210ENST00000477169 PXDNQ92626 1479 aa24.97■■□□□ 1.59
SMARCD3-210ENST00000477169 POGKQ9P215 609 aa24.97■■□□□ 1.59
SMARCD3-210ENST00000477169 ADGRB1O14514 1584 aa24.97■■□□□ 1.59
SMARCD3-210ENST00000477169 ADAMTS2O95450 1211 aa24.96■■□□□ 1.59
SMARCD3-210ENST00000477169 SAFB2Q14151 953 aaKnown RBP eCLIP24.95■■□□□ 1.58
SMARCD3-210ENST00000477169 NGLY1Q96IV0 654 aa24.95■■□□□ 1.58
SMARCD3-210ENST00000477169 COL22A1Q8NFW1 1626 aaPredicted RBP24.94■■□□□ 1.58
SMARCD3-210ENST00000477169 XPCQ01831 940 aaPredicted RBP24.94■■□□□ 1.58
SMARCD3-210ENST00000477169 TRAK1Q9UPV9 953 aa24.94■■□□□ 1.58
SMARCD3-210ENST00000477169 QTRT2Q9H974 415 aaKnown RBP24.92■■□□□ 1.58
SMARCD3-210ENST00000477169 KIF1AQ12756 1690 aa24.91■■□□□ 1.58
SMARCD3-210ENST00000477169 SIN3AQ96ST3 1273 aa24.91■■□□□ 1.58
SMARCD3-210ENST00000477169 PHF8Q9UPP1 1060 aa24.91■■□□□ 1.58
SMARCD3-210ENST00000477169 KRT28Q7Z3Y7 464 aa24.9■■□□□ 1.58
SMARCD3-210ENST00000477169 CDK12Q9NYV4 1490 aaPredicted RBP24.89■■□□□ 1.58
SMARCD3-210ENST00000477169 RGPD8O14715 1765 aaPredicted RBP24.88■■□□□ 1.57
SMARCD3-210ENST00000477169 RBM6P78332 1123 aaKnown RBP24.88■■□□□ 1.57
SMARCD3-210ENST00000477169 SPATA31A3Q5VYP0 1347 aa24.87■■□□□ 1.57
SMARCD3-210ENST00000477169 PSME1Q06323 249 aa24.87■■□□□ 1.57
SMARCD3-210ENST00000477169 FNBP4Q8N3X1 1017 aaPredicted RBP24.87■■□□□ 1.57
SMARCD3-210ENST00000477169 USP21Q9UK80 565 aa24.86■■□□□ 1.57
SMARCD3-210ENST00000477169 ANKARQ7Z5J8 1434 aa24.86■■□□□ 1.57
SMARCD3-210ENST00000477169 ADGRB2O60241 1585 aa24.85■■□□□ 1.57
SMARCD3-210ENST00000477169 NEUROD1Q13562 356 aa24.85■■□□□ 1.57
SMARCD3-210ENST00000477169 HIRIP3Q9BW71 556 aaPredicted RBP24.84■■□□□ 1.57
SMARCD3-210ENST00000477169 MINK1Q8N4C8 1332 aaPredicted RBP24.84■■□□□ 1.57
SMARCD3-210ENST00000477169 TRPC5Q9UL62 973 aaPredicted RBP24.82■■□□□ 1.56
SMARCD3-210ENST00000477169 EIF3AQ14152 1382 aaKnown RBP24.81■■□□□ 1.56
SMARCD3-210ENST00000477169 WASLO00401 505 aaPredicted RBP24.81■■□□□ 1.56
SMARCD3-210ENST00000477169 USP32Q8NFA0 1604 aa24.8■■□□□ 1.56
SMARCD3-210ENST00000477169 PMFBP1Q8TBY8 1022 aa24.8■■□□□ 1.56
SMARCD3-210ENST00000477169 SBNO1A3KN83 1393 aa24.8■■□□□ 1.56
SMARCD3-210ENST00000477169 MARF1Q9Y4F3 1742 aaKnown RBP24.79■■□□□ 1.56
SMARCD3-210ENST00000477169 TNS3Q68CZ2 1445 aa24.78■■□□□ 1.56
SMARCD3-210ENST00000477169 CCER1Q8TC90 406 aaPredicted RBP24.78■■□□□ 1.56
SMARCD3-210ENST00000477169 UPF1Q92900 1129 aaKnown RBP eCLIP24.78■■□□□ 1.56
SMARCD3-210ENST00000477169 CLSPNQ9HAW4 1339 aa24.78■■□□□ 1.56
SMARCD3-210ENST00000477169 KIAA1210Q9ULL0 1709 aa24.77■■□□□ 1.56
SMARCD3-210ENST00000477169 ARHGEF28Q8N1W1 1705 aaKnown RBP24.76■■□□□ 1.55
SMARCD3-210ENST00000477169 PRR36Q9H6K5 1346 aa24.76■■□□□ 1.55
SMARCD3-210ENST00000477169 RGS12O14924 1447 aa24.76■■□□□ 1.55
SMARCD3-210ENST00000477169 TULP4Q9NRJ4 1543 aa24.76■■□□□ 1.55
SMARCD3-210ENST00000477169 ATRNO75882 1429 aa24.75■■□□□ 1.55
SMARCD3-210ENST00000477169 BCL9LQ86UU0 1499 aa24.75■■□□□ 1.55
SMARCD3-210ENST00000477169 L3MBTL2Q969R5 705 aa24.74■■□□□ 1.55
SMARCD3-210ENST00000477169 ARHGEF10O15013 1369 aa24.74■■□□□ 1.55
SMARCD3-210ENST00000477169 LMOD2Q6P5Q4 547 aa24.73■■□□□ 1.55
SMARCD3-210ENST00000477169 HAP1P54257 671 aaPredicted RBP24.72■■□□□ 1.55
SMARCD3-210ENST00000477169 NBPF1Q3BBV0 1214 aa24.72■■□□□ 1.55
SMARCD3-210ENST00000477169 GPRASP1Q5JY77 1395 aa24.71■■□□□ 1.55
SMARCD3-210ENST00000477169 CABLES1Q8TDN4 633 aa24.7■■□□□ 1.54
SMARCD3-210ENST00000477169 UNC5CLQ8IV45 518 aa24.69■■□□□ 1.54
SMARCD3-210ENST00000477169 NGDNQ8NEJ9 315 aaKnown RBP24.69■■□□□ 1.54
SMARCD3-210ENST00000477169 NUDT16Q96DE0 195 aaKnown RBP24.69■■□□□ 1.54
SMARCD3-210ENST00000477169 SLIT2O94813 1529 aa24.69■■□□□ 1.54
SMARCD3-210ENST00000477169 GJD4Q96KN9 370 aaPredicted RBP24.68■■□□□ 1.54
SMARCD3-210ENST00000477169 CDK19Q9BWU1 502 aa24.68■■□□□ 1.54
SMARCD3-210ENST00000477169 TONSLQ96HA7 1378 aa24.67■■□□□ 1.54
SMARCD3-210ENST00000477169 TRPM3Q9HCF6 1732 aaPredicted RBP24.66■■□□□ 1.54
SMARCD3-210ENST00000477169 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.66■■□□□ 1.54
SMARCD3-210ENST00000477169 PLEKHG5O94827 1062 aa24.65■■□□□ 1.54
SMARCD3-210ENST00000477169 ATP7BP35670 1465 aa24.64■■□□□ 1.54
SMARCD3-210ENST00000477169 ITSN1Q15811 1721 aa24.64■■□□□ 1.53
SMARCD3-210ENST00000477169 CCDC61Q9Y6R9 512 aa24.62■■□□□ 1.53
SMARCD3-210ENST00000477169 ALS2Q96Q42 1657 aa24.62■■□□□ 1.53
SMARCD3-210ENST00000477169 ABCA3Q99758 1704 aa24.61■■□□□ 1.53
SMARCD3-210ENST00000477169 PAK3O75914 559 aaPredicted RBP24.61■■□□□ 1.53
SMARCD3-210ENST00000477169 ATAD2Q6PL18 1390 aa24.61■■□□□ 1.53
SMARCD3-210ENST00000477169 CENPJQ9HC77 1338 aaPredicted RBP24.61■■□□□ 1.53
SMARCD3-210ENST00000477169 FAM83GA6ND36 823 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms