RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 SETD1AO15047 1707 aaKnown RBP21.86■■□□□ 1.09
TMEM53-208ENST00000476724 SENP3-EIF4A1A0A087X0R7 540 aa21.86■■□□□ 1.09
TMEM53-208ENST00000476724 PTPRMP28827 1452 aa21.85■■□□□ 1.09
TMEM53-208ENST00000476724 PPP2R1AP30153 589 aa21.85■■□□□ 1.09
TMEM53-208ENST00000476724 RRP1P56182 461 aaKnown RBP21.85■■□□□ 1.09
TMEM53-208ENST00000476724 STK26Q9P289 416 aa21.85■■□□□ 1.09
TMEM53-208ENST00000476724 NRXN3Q9Y4C0 1643 aa21.84■■□□□ 1.09
TMEM53-208ENST00000476724 YTHDC2Q9H6S0 1430 aaKnown RBP21.82■■□□□ 1.08
TMEM53-208ENST00000476724 SALL2Q9Y467 1007 aaPredicted RBP21.81■■□□□ 1.08
TMEM53-208ENST00000476724 NLRP1Q9C000 1473 aa21.81■■□□□ 1.08
TMEM53-208ENST00000476724 RIMS1Q86UR5 1692 aaKnown RBP21.81■■□□□ 1.08
TMEM53-208ENST00000476724 SAFB2Q14151 953 aaKnown RBP eCLIP21.79■■□□□ 1.08
TMEM53-208ENST00000476724 WDR43Q15061 677 aaKnown RBP eCLIP21.79■■□□□ 1.08
TMEM53-208ENST00000476724 TMEM2Q9UHN6 1383 aa21.79■■□□□ 1.08
TMEM53-208ENST00000476724 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.79■■□□□ 1.08
TMEM53-208ENST00000476724 ADAMTS8Q9UP79 889 aa21.79■■□□□ 1.08
TMEM53-208ENST00000476724 TULP4Q9NRJ4 1543 aa21.78■■□□□ 1.08
TMEM53-208ENST00000476724 CDCA7LQ96GN5 454 aa21.76■■□□□ 1.07
TMEM53-208ENST00000476724 PRAM1Q96QH2 718 aa21.74■■□□□ 1.07
TMEM53-208ENST00000476724 ADAMTSL3P82987 1691 aa21.74■■□□□ 1.07
TMEM53-208ENST00000476724 METP08581 1390 aa21.73■■□□□ 1.07
TMEM53-208ENST00000476724 LTKP29376 864 aa21.73■■□□□ 1.07
TMEM53-208ENST00000476724 HDGFP51858 240 aaKnown RBP21.71■■□□□ 1.07
TMEM53-208ENST00000476724 EVC2Q86UK5 1308 aa21.71■■□□□ 1.07
TMEM53-208ENST00000476724 MINK1Q8N4C8 1332 aaPredicted RBP21.7■■□□□ 1.06
TMEM53-208ENST00000476724 CARD14Q9BXL6 1004 aa21.7■■□□□ 1.06
TMEM53-208ENST00000476724 POGKQ9P215 609 aa21.7■■□□□ 1.06
TMEM53-208ENST00000476724 EXOC6Q8TAG9 804 aa21.69■■□□□ 1.06
TMEM53-208ENST00000476724 CABP2Q9NPB3 220 aa21.69■■□□□ 1.06
TMEM53-208ENST00000476724 DLC1Q96QB1 1528 aa21.69■■□□□ 1.06
TMEM53-208ENST00000476724 SLC12A5Q9H2X9 1139 aa21.68■■□□□ 1.06
TMEM53-208ENST00000476724 PLEKHH1Q9ULM0 1364 aa21.68■■□□□ 1.06
TMEM53-208ENST00000476724 SLIT1O75093 1534 aa21.68■■□□□ 1.06
TMEM53-208ENST00000476724 ADAMTS13Q76LX8 1427 aa21.68■■□□□ 1.06
TMEM53-208ENST00000476724 ARHGAP23Q9P227 1491 aa21.68■■□□□ 1.06
TMEM53-208ENST00000476724 WAPLQ7Z5K2 1190 aa21.67■■□□□ 1.06
TMEM53-208ENST00000476724 TXNDC2Q86VQ3 553 aa21.67■■□□□ 1.06
TMEM53-208ENST00000476724 MSH5O43196 834 aa21.67■■□□□ 1.06
TMEM53-208ENST00000476724 NGEFQ8N5V2 710 aa21.67■■□□□ 1.06
TMEM53-208ENST00000476724 ZNF521Q96K83 1311 aa21.66■■□□□ 1.06
TMEM53-208ENST00000476724 ABCC11Q96J66 1382 aa21.66■■□□□ 1.06
TMEM53-208ENST00000476724 PUS7Q96PZ0 661 aaKnown RBP21.66■■□□□ 1.06
TMEM53-208ENST00000476724 PLEKHG1Q9ULL1 1385 aa21.66■■□□□ 1.06
TMEM53-208ENST00000476724 KNDC1Q76NI1 1749 aa21.65■■□□□ 1.06
TMEM53-208ENST00000476724 CEP170BQ9Y4F5 1589 aaPredicted RBP21.64■■□□□ 1.06
TMEM53-208ENST00000476724 GOLGA2Q08379 1002 aa21.64■■□□□ 1.05
TMEM53-208ENST00000476724 SRPK2P78362 688 aaKnown RBP21.62■■□□□ 1.05
TMEM53-208ENST00000476724 DUSP27Q5VZP5 1158 aa21.62■■□□□ 1.05
TMEM53-208ENST00000476724 THEMISQ8N1K5 641 aaPredicted RBP21.62■■□□□ 1.05
TMEM53-208ENST00000476724 EID1Q9Y6B2 187 aa21.62■■□□□ 1.05
TMEM53-208ENST00000476724 NSD3Q9BZ95 1437 aa21.61■■□□□ 1.05
TMEM53-208ENST00000476724 POLR3AO14802 1390 aaPredicted RBP21.61■■□□□ 1.05
TMEM53-208ENST00000476724 MED14O60244 1454 aa21.6■■□□□ 1.05
TMEM53-208ENST00000476724 SLC26A8Q96RN1 970 aa21.6■■□□□ 1.05
TMEM53-208ENST00000476724 CPS1P31327 1500 aa21.6■■□□□ 1.05
TMEM53-208ENST00000476724 TECPR2O15040 1411 aa21.59■■□□□ 1.05
TMEM53-208ENST00000476724 CDK19Q9BWU1 502 aa21.59■■□□□ 1.05
TMEM53-208ENST00000476724 USP32Q8NFA0 1604 aa21.58■■□□□ 1.05
TMEM53-208ENST00000476724 TCERG1O14776 1098 aaKnown RBP21.58■■□□□ 1.05
TMEM53-208ENST00000476724 SLFN5Q08AF3 891 aa21.57■■□□□ 1.04
TMEM53-208ENST00000476724 ERICH6Q7L0X2 663 aa21.57■■□□□ 1.04
TMEM53-208ENST00000476724 ZNF142P52746 1687 aaPredicted RBP21.57■■□□□ 1.04
TMEM53-208ENST00000476724 TRMT2AQ8IZ69 625 aaKnown RBP21.57■■□□□ 1.04
TMEM53-208ENST00000476724 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.56■■□□□ 1.04
TMEM53-208ENST00000476724 ANKRD36BQ8N2N9 1353 aa21.56■■□□□ 1.04
TMEM53-208ENST00000476724 PTPRUQ92729 1446 aa21.56■■□□□ 1.04
TMEM53-208ENST00000476724 FAM135BQ49AJ0 1406 aa21.55■■□□□ 1.04
TMEM53-208ENST00000476724 PLIN1O60240 522 aa21.55■■□□□ 1.04
TMEM53-208ENST00000476724 ROBO2Q9HCK4 1378 aa21.55■■□□□ 1.04
TMEM53-208ENST00000476724 ATAD2Q6PL18 1390 aa21.54■■□□□ 1.04
TMEM53-208ENST00000476724 MORC1Q86VD1 984 aa21.54■■□□□ 1.04
TMEM53-208ENST00000476724 SETD1BQ9UPS6 1966 aaKnown RBP21.54■■□□□ 1.04
TMEM53-208ENST00000476724 A0A1W2PP64 1363 aa21.53■■□□□ 1.04
TMEM53-208ENST00000476724 APAF1O14727 1248 aa21.53■■□□□ 1.04
TMEM53-208ENST00000476724 CRBNQ96SW2 442 aa21.53■■□□□ 1.04
TMEM53-208ENST00000476724 CD163L1Q9NR16 1453 aa21.53■■□□□ 1.04
TMEM53-208ENST00000476724 SIRT1Q96EB6 747 aa21.52■■□□□ 1.04
TMEM53-208ENST00000476724 MS4A1P11836 297 aa21.52■■□□□ 1.04
TMEM53-208ENST00000476724 CCDC146Q8IYE0 955 aa21.52■■□□□ 1.04
TMEM53-208ENST00000476724 NINLQ9Y2I6 1382 aa21.51■■□□□ 1.03
TMEM53-208ENST00000476724 E9PSI1 815 aa21.51■■□□□ 1.03
TMEM53-208ENST00000476724 CGNL1Q0VF96 1302 aa21.51■■□□□ 1.03
TMEM53-208ENST00000476724 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.51■■□□□ 1.03
TMEM53-208ENST00000476724 NSD2O96028 1365 aa21.5■■□□□ 1.03
TMEM53-208ENST00000476724 TBX22Q9Y458 520 aa21.5■■□□□ 1.03
TMEM53-208ENST00000476724 NKTRP30414 1462 aaKnown RBP21.5■■□□□ 1.03
TMEM53-208ENST00000476724 DIP2AQ14689 1571 aa21.49■■□□□ 1.03
TMEM53-208ENST00000476724 WASLO00401 505 aaPredicted RBP21.49■■□□□ 1.03
TMEM53-208ENST00000476724 ANP32AP39687 249 aaKnown RBP21.48■■□□□ 1.03
TMEM53-208ENST00000476724 CABP1Q9NZU7 370 aa21.48■■□□□ 1.03
TMEM53-208ENST00000476724 AMOTL2Q9Y2J4 779 aa21.47■■□□□ 1.03
TMEM53-208ENST00000476724 SHPRHQ149N8 1683 aa21.46■■□□□ 1.03
TMEM53-208ENST00000476724 CFAP53Q96M91 514 aa21.44■■□□□ 1.02
TMEM53-208ENST00000476724 NCKAP5LQ9HCH0 1330 aa21.44■■□□□ 1.02
TMEM53-208ENST00000476724 TERF2IPQ9NYB0 399 aa21.44■■□□□ 1.02
TMEM53-208ENST00000476724 XRN1Q8IZH2 1706 aaKnown RBP21.44■■□□□ 1.02
TMEM53-208ENST00000476724 ADGRB2O60241 1585 aa21.43■■□□□ 1.02
TMEM53-208ENST00000476724 TNNT2P45379 298 aaPredicted RBP21.43■■□□□ 1.02
TMEM53-208ENST00000476724 C20orf194Q5TEA3 1177 aa21.43■■□□□ 1.02
TMEM53-208ENST00000476724 NCBP3Q53F19 620 aaKnown RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms