RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 PPP4R2Q9NY27 417 aa5.46□□□□□ -1.54
CD55-208ENST00000476590 AVPP01185 164 aa5.45□□□□□ -1.54
CD55-208ENST00000476590 TPM2P07951 284 aa5.45□□□□□ -1.54
CD55-208ENST00000476590 FRAT1Q92837 279 aaPredicted RBP5.45□□□□□ -1.54
CD55-208ENST00000476590 TMEM51Q9NW97 253 aa5.45□□□□□ -1.54
CD55-208ENST00000476590 CLCN1P35523 988 aa5.45□□□□□ -1.54
CD55-208ENST00000476590 SPRYD7Q5W111 196 aa5.45□□□□□ -1.54
CD55-208ENST00000476590 RABGEF1Q9UJ41 708 aa5.45□□□□□ -1.54
CD55-208ENST00000476590 SOX12O15370 315 aa5.44□□□□□ -1.54
CD55-208ENST00000476590 SMCPP49901 116 aaPredicted RBP5.44□□□□□ -1.54
CD55-208ENST00000476590 UTP14CQ5TAP6 766 aaKnown RBP5.44□□□□□ -1.54
CD55-208ENST00000476590 COBLO75128 1261 aa5.43□□□□□ -1.54
CD55-208ENST00000476590 SNRPBP14678 240 aaKnown RBP5.43□□□□□ -1.54
CD55-208ENST00000476590 WWC1Q8IX03 1113 aa5.43□□□□□ -1.54
CD55-208ENST00000476590 FAM177A1Q8N128 213 aaPredicted RBP5.43□□□□□ -1.54
CD55-208ENST00000476590 GDF9O60383 454 aa5.43□□□□□ -1.54
CD55-208ENST00000476590 CCDC82Q8N4S0 544 aa5.43□□□□□ -1.54
CD55-208ENST00000476590 PTCD2Q8WV60 388 aaKnown RBP5.43□□□□□ -1.54
CD55-208ENST00000476590 ANP32BQ92688 251 aaKnown RBP5.43□□□□□ -1.54
CD55-208ENST00000476590 MAP7D2Q96T17 732 aa5.43□□□□□ -1.54
CD55-208ENST00000476590 NXF1Q9UBU9 619 aaKnown RBP5.43□□□□□ -1.54
CD55-208ENST00000476590 HPS5Q9UPZ3 1129 aa5.43□□□□□ -1.54
CD55-208ENST00000476590 IRX3P78415 501 aaPredicted RBP5.42□□□□□ -1.54
CD55-208ENST00000476590 TICAM2Q86XR7 235 aa5.42□□□□□ -1.54
CD55-208ENST00000476590 KIFC2Q96AC6 838 aa5.42□□□□□ -1.54
CD55-208ENST00000476590 DDRGK1Q96HY6 314 aa5.42□□□□□ -1.54
CD55-208ENST00000476590 ZFRQ96KR1 1074 aaKnown RBP5.42□□□□□ -1.54
CD55-208ENST00000476590 TRIM47Q96LD4 638 aa5.42□□□□□ -1.54
CD55-208ENST00000476590 KCNG1Q9UIX4 513 aa5.42□□□□□ -1.54
CD55-208ENST00000476590 LAS1LQ9Y4W2 734 aaKnown RBP5.42□□□□□ -1.54
CD55-208ENST00000476590 CLGNO14967 610 aa5.42□□□□□ -1.54
CD55-208ENST00000476590 MFAP1P55081 439 aaKnown RBP5.42□□□□□ -1.54
CD55-208ENST00000476590 DCAF11Q8TEB1 546 aa5.42□□□□□ -1.54
CD55-208ENST00000476590 ZC3H15Q8WU90 426 aaKnown RBP5.42□□□□□ -1.54
CD55-208ENST00000476590 TBC1D12O60347 775 aa5.41□□□□□ -1.54
CD55-208ENST00000476590 PTMAP06454 111 aaKnown RBP5.41□□□□□ -1.54
CD55-208ENST00000476590 CWC22Q9HCG8 908 aaKnown RBP5.4□□□□□ -1.54
CD55-208ENST00000476590 TNFRSF10AO00220 468 aa5.4□□□□□ -1.55
CD55-208ENST00000476590 TNNT2P45379 298 aaPredicted RBP5.4□□□□□ -1.55
CD55-208ENST00000476590 MMP14P50281 582 aa5.4□□□□□ -1.55
CD55-208ENST00000476590 GRIPAP1Q4V328 841 aa5.4□□□□□ -1.55
CD55-208ENST00000476590 ZNF697Q5TEC3 545 aa5.4□□□□□ -1.55
CD55-208ENST00000476590 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.4□□□□□ -1.55
CD55-208ENST00000476590 EEA1Q15075 1411 aa5.4□□□□□ -1.55
CD55-208ENST00000476590 GZF1Q9H116 711 aaPredicted RBP5.39□□□□□ -1.55
CD55-208ENST00000476590 GPBP1L1Q9HC44 474 aaPredicted RBP5.39□□□□□ -1.55
CD55-208ENST00000476590 PRDM10Q9NQV6 1147 aa5.39□□□□□ -1.55
CD55-208ENST00000476590 ZHX1Q9UKY1 873 aaPredicted RBP5.39□□□□□ -1.55
CD55-208ENST00000476590 VGLL3A8MV65 326 aa5.39□□□□□ -1.55
CD55-208ENST00000476590 FAM193AP78312 1265 aa5.39□□□□□ -1.55
CD55-208ENST00000476590 DMTNQ08495 405 aa5.39□□□□□ -1.55
CD55-208ENST00000476590 NKX1-1Q15270 411 aaPredicted RBP5.39□□□□□ -1.55
CD55-208ENST00000476590 L1TD1Q5T7N2 865 aaKnown RBP5.39□□□□□ -1.55
CD55-208ENST00000476590 TMCO4Q5TGY1 634 aa5.39□□□□□ -1.55
CD55-208ENST00000476590 TAF3Q5VWG9 929 aa5.39□□□□□ -1.55
CD55-208ENST00000476590 MTRQ99707 1265 aa5.39□□□□□ -1.55
CD55-208ENST00000476590 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.39□□□□□ -1.55
CD55-208ENST00000476590 MSTNO14793 375 aa5.38□□□□□ -1.55
CD55-208ENST00000476590 NFKBIBQ15653 356 aa5.38□□□□□ -1.55
CD55-208ENST00000476590 AXDND1Q5T1B0 1012 aaPredicted RBP5.38□□□□□ -1.55
CD55-208ENST00000476590 TMED8Q6PL24 325 aaPredicted RBP5.38□□□□□ -1.55
CD55-208ENST00000476590 ZNF622Q969S3 477 aaKnown RBP eCLIP5.38□□□□□ -1.55
CD55-208ENST00000476590 K7ELQ4 463 aaPredicted RBP5.38□□□□□ -1.55
CD55-208ENST00000476590 KIF20AO95235 890 aa5.38□□□□□ -1.55
CD55-208ENST00000476590 PTMSP20962 102 aa5.38□□□□□ -1.55
CD55-208ENST00000476590 LAMC2Q13753 1193 aa5.38□□□□□ -1.55
CD55-208ENST00000476590 CLSTN1O94985 981 aa5.37□□□□□ -1.55
CD55-208ENST00000476590 ZNF592Q92610 1267 aa5.37□□□□□ -1.55
CD55-208ENST00000476590 HDAC5Q9UQL6 1122 aa5.37□□□□□ -1.55
CD55-208ENST00000476590 CCER2I3L3R5 266 aa5.36□□□□□ -1.55
CD55-208ENST00000476590 MCCP23508 829 aa5.36□□□□□ -1.55
CD55-208ENST00000476590 MTERF4Q7Z6M4 381 aaKnown RBP5.36□□□□□ -1.55
CD55-208ENST00000476590 LRCH3Q96II8 777 aa5.36□□□□□ -1.55
CD55-208ENST00000476590 MS4A4AQ96JQ5 239 aa5.36□□□□□ -1.55
CD55-208ENST00000476590 KANK3Q6NY19 840 aa5.36□□□□□ -1.55
CD55-208ENST00000476590 CERS3Q8IU89 383 aa5.36□□□□□ -1.55
CD55-208ENST00000476590 ZNF454Q8N9F8 522 aa5.36□□□□□ -1.55
CD55-208ENST00000476590 PATL2C9JE40 543 aaKnown RBP5.35□□□□□ -1.55
CD55-208ENST00000476590 E9PSI1 815 aa5.35□□□□□ -1.55
CD55-208ENST00000476590 SPOCK2Q92563 424 aa5.35□□□□□ -1.55
CD55-208ENST00000476590 PLCD4Q9BRC7 762 aa5.35□□□□□ -1.55
CD55-208ENST00000476590 TRAIPQ9BWF2 469 aa5.35□□□□□ -1.55
CD55-208ENST00000476590 KRTAP4-5Q9BYR2 181 aa5.35□□□□□ -1.55
CD55-208ENST00000476590 LETM1O95202 739 aaPredicted RBP5.35□□□□□ -1.55
CD55-208ENST00000476590 APPP05067 770 aa5.35□□□□□ -1.55
CD55-208ENST00000476590 DNTTIP2Q5QJE6 756 aaKnown RBP5.35□□□□□ -1.55
CD55-208ENST00000476590 KCNV2Q8TDN2 545 aa5.35□□□□□ -1.55
CD55-208ENST00000476590 PHF14O94880 888 aa5.34□□□□□ -1.55
CD55-208ENST00000476590 TMC2Q8TDI7 906 aa5.34□□□□□ -1.55
CD55-208ENST00000476590 TRIM52Q96A61 297 aa5.34□□□□□ -1.55
CD55-208ENST00000476590 GTPBP4Q9BZE4 634 aaKnown RBP5.34□□□□□ -1.55
CD55-208ENST00000476590 GTPBP6O43824 516 aaPredicted RBP5.33□□□□□ -1.56
CD55-208ENST00000476590 TERF1P54274 439 aa5.33□□□□□ -1.56
CD55-208ENST00000476590 SLC20A2Q08357 652 aa5.33□□□□□ -1.56
CD55-208ENST00000476590 B4GALNT3Q6L9W6 998 aa5.33□□□□□ -1.56
CD55-208ENST00000476590 ATP13A2Q9NQ11 1180 aa5.33□□□□□ -1.56
CD55-208ENST00000476590 PPP4CP60510 307 aa5.33□□□□□ -1.56
CD55-208ENST00000476590 SLC52A1Q9NWF4 448 aa5.33□□□□□ -1.56
CD55-208ENST00000476590 H3BM21 787 aa5.32□□□□□ -1.56
CD55-208ENST00000476590 TRIM44Q96DX7 344 aaPredicted RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms