RNA–Protein interactions for RNA: ENST00000476581.6

XPC-205, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 1 (best)

Gene XPC, Length 2,944 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-205ENST00000476581 NCKAP5LQ9HCH0 1330 aa16.41■□□□□ 0.22
XPC-205ENST00000476581 HDGFP51858 240 aaKnown RBP16.41■□□□□ 0.22
XPC-205ENST00000476581 PANK3Q9H999 370 aa16.41■□□□□ 0.22
XPC-205ENST00000476581 CABP2Q9NPB3 220 aa16.41■□□□□ 0.22
XPC-205ENST00000476581 ROBO2Q9HCK4 1378 aa16.41■□□□□ 0.22
XPC-205ENST00000476581 POGKQ9P215 609 aa16.4■□□□□ 0.22
XPC-205ENST00000476581 ANP32CO43423 234 aa16.39■□□□□ 0.21
XPC-205ENST00000476581 SBNO2Q9Y2G9 1366 aa16.39■□□□□ 0.21
XPC-205ENST00000476581 PER1O15534 1290 aaPredicted RBP16.39■□□□□ 0.21
XPC-205ENST00000476581 ABCC11Q96J66 1382 aa16.38■□□□□ 0.21
XPC-205ENST00000476581 RBM33Q96EV2 1170 aaKnown RBP16.38■□□□□ 0.21
XPC-205ENST00000476581 SLC12A5Q9H2X9 1139 aa16.37■□□□□ 0.21
XPC-205ENST00000476581 ANKLE2Q86XL3 938 aa16.37■□□□□ 0.21
XPC-205ENST00000476581 PRKRIP1Q9H875 184 aaPredicted RBP16.37■□□□□ 0.21
XPC-205ENST00000476581 KNDC1Q76NI1 1749 aa16.36■□□□□ 0.21
XPC-205ENST00000476581 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.36■□□□□ 0.21
XPC-205ENST00000476581 AMOTL2Q9Y2J4 779 aa16.35■□□□□ 0.21
XPC-205ENST00000476581 DLC1Q96QB1 1528 aa16.35■□□□□ 0.21
XPC-205ENST00000476581 DEKP35659 375 aaKnown RBP16.35■□□□□ 0.21
XPC-205ENST00000476581 CARD14Q9BXL6 1004 aa16.35■□□□□ 0.21
XPC-205ENST00000476581 TBX22Q9Y458 520 aa16.34■□□□□ 0.21
XPC-205ENST00000476581 CPS1P31327 1500 aa16.34■□□□□ 0.21
XPC-205ENST00000476581 TMC1Q8TDI8 760 aa16.34■□□□□ 0.21
XPC-205ENST00000476581 TECPR2O15040 1411 aa16.33■□□□□ 0.21
XPC-205ENST00000476581 KCNA6P17658 529 aa16.33■□□□□ 0.21
XPC-205ENST00000476581 CC2D1BQ5T0F9 858 aaKnown RBP16.33■□□□□ 0.2
XPC-205ENST00000476581 CDK19Q9BWU1 502 aa16.33■□□□□ 0.2
XPC-205ENST00000476581 SRPK2P78362 688 aaKnown RBP16.32■□□□□ 0.2
XPC-205ENST00000476581 EVC2Q86UK5 1308 aa16.32■□□□□ 0.2
XPC-205ENST00000476581 LMTK3Q96Q04 1460 aa16.31■□□□□ 0.2
XPC-205ENST00000476581 NUTM2FA1L443 756 aa16.31■□□□□ 0.2
XPC-205ENST00000476581 XRN1Q8IZH2 1706 aaKnown RBP16.31■□□□□ 0.2
XPC-205ENST00000476581 NPHP4O75161 1426 aaPredicted RBP16.3■□□□□ 0.2
XPC-205ENST00000476581 CDCA8Q53HL2 280 aa16.29■□□□□ 0.2
XPC-205ENST00000476581 CHD2O14647 1828 aaKnown RBP16.29■□□□□ 0.2
XPC-205ENST00000476581 DIP2AQ14689 1571 aa16.28■□□□□ 0.2
XPC-205ENST00000476581 FAM135BQ49AJ0 1406 aa16.28■□□□□ 0.2
XPC-205ENST00000476581 AMER1Q5JTC6 1135 aaPredicted RBP16.27■□□□□ 0.2
XPC-205ENST00000476581 ANO8Q9HCE9 1232 aaPredicted RBP16.27■□□□□ 0.19
XPC-205ENST00000476581 CD163L1Q9NR16 1453 aa16.26■□□□□ 0.19
XPC-205ENST00000476581 PRR36Q9H6K5 1346 aa16.26■□□□□ 0.19
XPC-205ENST00000476581 WASLO00401 505 aaPredicted RBP16.26■□□□□ 0.19
XPC-205ENST00000476581 CABP1Q9NZU7 370 aa16.26■□□□□ 0.19
XPC-205ENST00000476581 STRCQ7RTU9 1775 aa16.26■□□□□ 0.19
XPC-205ENST00000476581 ERICH6BQ5W0A0 696 aa16.25■□□□□ 0.19
XPC-205ENST00000476581 STRCP1A6NGW2 1772 aa16.24■□□□□ 0.19
XPC-205ENST00000476581 RGPD8O14715 1765 aaPredicted RBP16.24■□□□□ 0.19
XPC-205ENST00000476581 A0A1W2PP64 1363 aa16.24■□□□□ 0.19
XPC-205ENST00000476581 NSD3Q9BZ95 1437 aa16.24■□□□□ 0.19
XPC-205ENST00000476581 CCER2I3L3R5 266 aa16.23■□□□□ 0.19
XPC-205ENST00000476581 SIRT1Q96EB6 747 aa16.23■□□□□ 0.19
XPC-205ENST00000476581 PTCH1Q13635 1447 aa16.23■□□□□ 0.19
XPC-205ENST00000476581 KNSTRNQ9Y448 316 aa16.23■□□□□ 0.19
XPC-205ENST00000476581 PARD3Q8TEW0 1356 aa16.22■□□□□ 0.19
XPC-205ENST00000476581 NALCNQ8IZF0 1738 aa16.22■□□□□ 0.19
XPC-205ENST00000476581 USP32Q8NFA0 1604 aa16.21■□□□□ 0.19
XPC-205ENST00000476581 SENP3-EIF4A1A0A087X0R7 540 aa16.21■□□□□ 0.19
XPC-205ENST00000476581 SLC24A1O60721 1099 aa16.21■□□□□ 0.18
XPC-205ENST00000476581 NUDT16Q96DE0 195 aaKnown RBP16.21■□□□□ 0.18
XPC-205ENST00000476581 ATP7BP35670 1465 aa16.21■□□□□ 0.18
XPC-205ENST00000476581 KTN1Q86UP2 1357 aaKnown RBP16.2■□□□□ 0.18
XPC-205ENST00000476581 MRS2Q9HD23 443 aa16.2■□□□□ 0.18
XPC-205ENST00000476581 ADGRB2O60241 1585 aa16.2■□□□□ 0.18
XPC-205ENST00000476581 PPIP5K1Q6PFW1 1433 aa16.19■□□□□ 0.18
XPC-205ENST00000476581 ANKRD36BQ8N2N9 1353 aa16.18■□□□□ 0.18
XPC-205ENST00000476581 PIK3R4Q99570 1358 aa16.18■□□□□ 0.18
XPC-205ENST00000476581 ATAD2Q6PL18 1390 aa16.18■□□□□ 0.18
XPC-205ENST00000476581 PUS7Q96PZ0 661 aaKnown RBP16.18■□□□□ 0.18
XPC-205ENST00000476581 NKTRP30414 1462 aaKnown RBP16.17■□□□□ 0.18
XPC-205ENST00000476581 TNNT2P45379 298 aaPredicted RBP16.17■□□□□ 0.18
XPC-205ENST00000476581 FAM9BQ8IZU0 186 aa16.17■□□□□ 0.18
XPC-205ENST00000476581 MYBBP1AQ9BQG0 1328 aaKnown RBP16.16■□□□□ 0.18
XPC-205ENST00000476581 PMFBP1Q8TBY8 1022 aa16.15■□□□□ 0.18
XPC-205ENST00000476581 TOPAZ1Q8N9V7 1692 aa16.15■□□□□ 0.18
XPC-205ENST00000476581 FBLN1P23142 703 aa16.15■□□□□ 0.18
XPC-205ENST00000476581 RALBP1Q15311 655 aa16.15■□□□□ 0.18
XPC-205ENST00000476581 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.15■□□□□ 0.181e-6■■□□□ 13.2
XPC-205ENST00000476581 NWD1Q149M9 1564 aa16.14■□□□□ 0.17
XPC-205ENST00000476581 GGNBP2Q9H3C7 697 aa16.14■□□□□ 0.17
XPC-205ENST00000476581 ZRANB1Q9UGI0 708 aa16.14■□□□□ 0.17
XPC-205ENST00000476581 CCDC61Q9Y6R9 512 aa16.14■□□□□ 0.17
XPC-205ENST00000476581 PPP2R1AP30153 589 aa16.13■□□□□ 0.17
XPC-205ENST00000476581 CPSF1Q10570 1443 aaKnown RBP16.12■□□□□ 0.17
XPC-205ENST00000476581 FMN2Q9NZ56 1722 aa16.11■□□□□ 0.17
XPC-205ENST00000476581 ZNF335Q9H4Z2 1342 aaPredicted RBP16.11■□□□□ 0.17
XPC-205ENST00000476581 FYB1O15117 783 aa16.11■□□□□ 0.17
XPC-205ENST00000476581 SALL2Q9Y467 1007 aaPredicted RBP16.11■□□□□ 0.17
XPC-205ENST00000476581 CDC42BPGQ6DT37 1551 aa16.11■□□□□ 0.17
XPC-205ENST00000476581 AKAP12Q02952 1782 aa16.11■□□□□ 0.17
XPC-205ENST00000476581 ACEP12821 1306 aa16.1■□□□□ 0.17
XPC-205ENST00000476581 PROSER2Q86WR7 435 aaPredicted RBP16.1■□□□□ 0.17
XPC-205ENST00000476581 NINLQ9Y2I6 1382 aa16.1■□□□□ 0.17
XPC-205ENST00000476581 TERF2IPQ9NYB0 399 aa16.1■□□□□ 0.17
XPC-205ENST00000476581 PNISRQ8TF01 805 aaKnown RBP16.09■□□□□ 0.17
XPC-205ENST00000476581 ITSN1Q15811 1721 aa16.09■□□□□ 0.17
XPC-205ENST00000476581 MON2Q7Z3U7 1717 aa16.09■□□□□ 0.17
XPC-205ENST00000476581 C14orf37Q86TY3 774 aa16.09■□□□□ 0.17
XPC-205ENST00000476581 NME9Q86XW9 330 aa16.09■□□□□ 0.17
XPC-205ENST00000476581 NPC1L1Q9UHC9 1359 aa16.09■□□□□ 0.17
XPC-205ENST00000476581 CGNL1Q0VF96 1302 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms