RNA–Protein interactions for RNA: ENST00000476350.1

MACF1-216, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 5,304 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-216ENST00000476350 TRPM2O94759 1503 aa10.77□□□□□ -0.69
MACF1-216ENST00000476350 TRMT2AQ8IZ69 625 aaKnown RBP10.77□□□□□ -0.69
MACF1-216ENST00000476350 TXNDC2Q86VQ3 553 aa10.77□□□□□ -0.69
MACF1-216ENST00000476350 APAF1O14727 1248 aa10.76□□□□□ -0.69
MACF1-216ENST00000476350 IGHDP01880 384 aa10.76□□□□□ -0.69
MACF1-216ENST00000476350 NINLQ9Y2I6 1382 aa10.76□□□□□ -0.69
MACF1-216ENST00000476350 SHROOM2Q13796 1616 aa10.76□□□□□ -0.69
MACF1-216ENST00000476350 RTF1Q92541 710 aaKnown RBP10.76□□□□□ -0.69
MACF1-216ENST00000476350 PPP6R1Q9UPN7 881 aa10.76□□□□□ -0.69
MACF1-216ENST00000476350 CLTCL1P53675 1640 aa10.76□□□□□ -0.69
MACF1-216ENST00000476350 SPINK5Q9NQ38 1064 aaPredicted RBP10.75□□□□□ -0.69
MACF1-216ENST00000476350 CENPJQ9HC77 1338 aaPredicted RBP10.75□□□□□ -0.69
MACF1-216ENST00000476350 NUTM2BA6NNL0 878 aaPredicted RBP10.74□□□□□ -0.69
MACF1-216ENST00000476350 NUTM2EB1AL46 878 aaPredicted RBP10.74□□□□□ -0.69
MACF1-216ENST00000476350 NUTM2DQ5VT03 806 aaPredicted RBP10.74□□□□□ -0.69
MACF1-216ENST00000476350 NUTM2AQ8IVF1 878 aaPredicted RBP10.74□□□□□ -0.69
MACF1-216ENST00000476350 CGNL1Q0VF96 1302 aa10.73□□□□□ -0.69
MACF1-216ENST00000476350 NPC1L1Q9UHC9 1359 aa10.73□□□□□ -0.69
MACF1-216ENST00000476350 CLUAP1Q96AJ1 413 aa10.73□□□□□ -0.69
MACF1-216ENST00000476350 FAM43AQ8N2R8 423 aa10.73□□□□□ -0.69
MACF1-216ENST00000476350 PANK1Q8TE04 598 aa10.73□□□□□ -0.69
MACF1-216ENST00000476350 HDAC5Q9UQL6 1122 aa10.72□□□□□ -0.69
MACF1-216ENST00000476350 KIAA1210Q9ULL0 1709 aa10.72□□□□□ -0.69
MACF1-216ENST00000476350 EIF5BO60841 1220 aaKnown RBP10.72□□□□□ -0.69
MACF1-216ENST00000476350 UPF2Q9HAU5 1272 aaKnown RBP10.72□□□□□ -0.69
MACF1-216ENST00000476350 COG6Q9Y2V7 657 aa10.72□□□□□ -0.69
MACF1-216ENST00000476350 PDE3AQ14432 1141 aa10.71□□□□□ -0.69
MACF1-216ENST00000476350 SOX12O15370 315 aa10.71□□□□□ -0.69
MACF1-216ENST00000476350 AMPHP49418 695 aa10.71□□□□□ -0.69
MACF1-216ENST00000476350 PMFBP1Q8TBY8 1022 aa10.71□□□□□ -0.69
MACF1-216ENST00000476350 ABCC1P33527 1531 aa10.71□□□□□ -0.69
MACF1-216ENST00000476350 NGLY1Q96IV0 654 aa10.71□□□□□ -0.7
MACF1-216ENST00000476350 STAC3Q96MF2 364 aa10.71□□□□□ -0.7
MACF1-216ENST00000476350 SLKQ9H2G2 1235 aaPredicted RBP10.71□□□□□ -0.7
MACF1-216ENST00000476350 CHMP4BQ9H444 224 aaKnown RBP10.71□□□□□ -0.7
MACF1-216ENST00000476350 USP19O94966 1318 aa10.7□□□□□ -0.7
MACF1-216ENST00000476350 CD109Q6YHK3 1445 aa10.7□□□□□ -0.7
MACF1-216ENST00000476350 CHD1O14646 1710 aa10.7□□□□□ -0.7
MACF1-216ENST00000476350 SEC24BO95487 1268 aa10.7□□□□□ -0.7
MACF1-216ENST00000476350 ABCA6Q8N139 1617 aa10.7□□□□□ -0.7
MACF1-216ENST00000476350 TET3O43151 1660 aa10.7□□□□□ -0.7
MACF1-216ENST00000476350 L1TD1Q5T7N2 865 aaKnown RBP10.7□□□□□ -0.7
MACF1-216ENST00000476350 RSPH6AQ9H0K4 717 aa10.69□□□□□ -0.7
MACF1-216ENST00000476350 PLCH2O75038 1416 aa10.69□□□□□ -0.7
MACF1-216ENST00000476350 ERVK-7P63135 1459 aa10.69□□□□□ -0.7
MACF1-216ENST00000476350 NLRP1Q9C000 1473 aa10.69□□□□□ -0.7
MACF1-216ENST00000476350 NGEFQ8N5V2 710 aa10.69□□□□□ -0.7
MACF1-216ENST00000476350 SAFB2Q14151 953 aaKnown RBP eCLIP10.69□□□□□ -0.75e-7■■□□□ 13.1
MACF1-216ENST00000476350 WWC1Q8IX03 1113 aa10.69□□□□□ -0.7
MACF1-216ENST00000476350 SHPRHQ149N8 1683 aa10.68□□□□□ -0.7
MACF1-216ENST00000476350 ZCCHC11Q5TAX3 1644 aaKnown RBP10.68□□□□□ -0.7
MACF1-216ENST00000476350 PTPRTO14522 1441 aa10.68□□□□□ -0.7
MACF1-216ENST00000476350 TRAPPC8Q9Y2L5 1435 aa10.68□□□□□ -0.7
MACF1-216ENST00000476350 DEPDC5O75140 1603 aa10.68□□□□□ -0.7
MACF1-216ENST00000476350 NEUROD2Q15784 382 aa10.68□□□□□ -0.7
MACF1-216ENST00000476350 MAP3K4Q9Y6R4 1608 aa10.68□□□□□ -0.7
MACF1-216ENST00000476350 ZFYVE16Q7Z3T8 1539 aa10.68□□□□□ -0.7
MACF1-216ENST00000476350 RRP7AQ9Y3A4 280 aaKnown RBP10.67□□□□□ -0.7
MACF1-216ENST00000476350 CALD1Q05682 793 aaKnown RBP10.67□□□□□ -0.7
MACF1-216ENST00000476350 WDHD1O75717 1129 aaPredicted RBP10.66□□□□□ -0.7
MACF1-216ENST00000476350 MORC1Q86VD1 984 aa10.66□□□□□ -0.7
MACF1-216ENST00000476350 SLC52A1Q9NWF4 448 aa10.66□□□□□ -0.7
MACF1-216ENST00000476350 POLR3AO14802 1390 aaPredicted RBP10.66□□□□□ -0.7
MACF1-216ENST00000476350 IQSEC2Q5JU85 1478 aa10.66□□□□□ -0.7
MACF1-216ENST00000476350 SPRYD3Q8NCJ5 442 aa10.66□□□□□ -0.7
MACF1-216ENST00000476350 MYO3AQ8NEV4 1616 aa10.66□□□□□ -0.7
MACF1-216ENST00000476350 TNNT2P45379 298 aaPredicted RBP10.65□□□□□ -0.7
MACF1-216ENST00000476350 NBPF14Q5TI25 921 aa10.65□□□□□ -0.7
MACF1-216ENST00000476350 RUNDC1Q96C34 613 aa10.65□□□□□ -0.7
MACF1-216ENST00000476350 MYOM2P54296 1465 aa10.65□□□□□ -0.7
MACF1-216ENST00000476350 AAMPQ13685 434 aa10.65□□□□□ -0.7
MACF1-216ENST00000476350 PDZRN3Q9UPQ7 1066 aa10.65□□□□□ -0.7
MACF1-216ENST00000476350 CARD14Q9BXL6 1004 aa10.65□□□□□ -0.7
MACF1-216ENST00000476350 RWDD1Q9H446 243 aaPredicted RBP10.65□□□□□ -0.7
MACF1-216ENST00000476350 ZNF330Q9Y3S2 320 aaPredicted RBP10.65□□□□□ -0.7
MACF1-216ENST00000476350 MROH2AA6NES4 1674 aa10.64□□□□□ -0.71
MACF1-216ENST00000476350 NSD3Q9BZ95 1437 aa10.64□□□□□ -0.71
MACF1-216ENST00000476350 RARSP54136 660 aaKnown RBP10.64□□□□□ -0.71
MACF1-216ENST00000476350 NEURL4Q96JN8 1562 aa10.64□□□□□ -0.71
MACF1-216ENST00000476350 KIF1BO60333 1816 aa10.64□□□□□ -0.71
MACF1-216ENST00000476350 ZMYM3Q14202 1370 aa10.64□□□□□ -0.71
MACF1-216ENST00000476350 RTEL1-TNFRSF6BF6WH68 1400 aa10.64□□□□□ -0.71
MACF1-216ENST00000476350 CFAP70Q5T0N1 1121 aa10.64□□□□□ -0.71
MACF1-216ENST00000476350 TBC1D32Q96NH3 1257 aa10.64□□□□□ -0.71
MACF1-216ENST00000476350 HSP90B1P14625 803 aaKnown RBP10.63□□□□□ -0.71
MACF1-216ENST00000476350 C1orf141Q5JVX7 400 aa10.63□□□□□ -0.71
MACF1-216ENST00000476350 ZC3H13Q5T200 1668 aaKnown RBP10.63□□□□□ -0.71
MACF1-216ENST00000476350 ERCC6L2Q5T890 1561 aa10.63□□□□□ -0.71
MACF1-216ENST00000476350 UGGT1Q9NYU2 1555 aa10.63□□□□□ -0.71
MACF1-216ENST00000476350 IFT172Q9UG01 1749 aa10.63□□□□□ -0.71
MACF1-216ENST00000476350 CDK11BP21127 795 aaKnown RBP10.63□□□□□ -0.71
MACF1-216ENST00000476350 GOLGA6L3A6NEY3 463 aa10.63□□□□□ -0.71
MACF1-216ENST00000476350 BCL2L13Q9BXK5 485 aa10.63□□□□□ -0.71
MACF1-216ENST00000476350 TBC1D2Q9BYX2 928 aa10.62□□□□□ -0.71
MACF1-216ENST00000476350 TNNQ9UQP3 1299 aa10.62□□□□□ -0.71
MACF1-216ENST00000476350 QRICH2Q9H0J4 1663 aa10.62□□□□□ -0.71
MACF1-216ENST00000476350 ADGRF5Q8IZF2 1346 aa10.62□□□□□ -0.71
MACF1-216ENST00000476350 FTSJ3Q8IY81 847 aaKnown RBP10.62□□□□□ -0.71
MACF1-216ENST00000476350 WDR63Q8IWG1 891 aa10.61□□□□□ -0.71
MACF1-216ENST00000476350 ANTXR1Q9H6X2 564 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms