RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 ANKRD30BQ9BXX2 1392 aa19.68■□□□□ 0.74
MRPL55-228ENST00000476267 PXDNQ92626 1479 aa19.67■□□□□ 0.74
MRPL55-228ENST00000476267 RXRBP28702 533 aa19.67■□□□□ 0.74
MRPL55-228ENST00000476267 UPF1Q92900 1129 aaKnown RBP eCLIP19.67■□□□□ 0.74
MRPL55-228ENST00000476267 LRPPRCP42704 1394 aaKnown RBP19.66■□□□□ 0.74
MRPL55-228ENST00000476267 RGS12O14924 1447 aa19.66■□□□□ 0.74
MRPL55-228ENST00000476267 FMN2Q9NZ56 1722 aa19.65■□□□□ 0.74
MRPL55-228ENST00000476267 NRXN1Q9ULB1 1477 aa19.65■□□□□ 0.74
MRPL55-228ENST00000476267 C8orf37Q96NL8 207 aa19.64■□□□□ 0.73
MRPL55-228ENST00000476267 ABCC11Q96J66 1382 aa19.64■□□□□ 0.73
MRPL55-228ENST00000476267 MYOM2P54296 1465 aa19.64■□□□□ 0.73
MRPL55-228ENST00000476267 MARF1Q9Y4F3 1742 aaKnown RBP19.64■□□□□ 0.73
MRPL55-228ENST00000476267 PLEKHH1Q9ULM0 1364 aa19.62■□□□□ 0.73
MRPL55-228ENST00000476267 RGL3Q3MIN7 710 aa19.62■□□□□ 0.73
MRPL55-228ENST00000476267 YTHDC2Q9H6S0 1430 aaKnown RBP19.6■□□□□ 0.73
MRPL55-228ENST00000476267 QTRT2Q9H974 415 aaKnown RBP19.6■□□□□ 0.73
MRPL55-228ENST00000476267 KIF1AQ12756 1690 aa19.59■□□□□ 0.73
MRPL55-228ENST00000476267 NPHP3Q7Z494 1330 aa19.59■□□□□ 0.73
MRPL55-228ENST00000476267 RBM6P78332 1123 aaKnown RBP19.59■□□□□ 0.73
MRPL55-228ENST00000476267 WAPLQ7Z5K2 1190 aa19.59■□□□□ 0.73
MRPL55-228ENST00000476267 ADAMTS2O95450 1211 aa19.58■□□□□ 0.72
MRPL55-228ENST00000476267 TMEM132EQ6IEE7 984 aa19.58■□□□□ 0.72
MRPL55-228ENST00000476267 ESCO1Q5FWF5 840 aa19.57■□□□□ 0.72
MRPL55-228ENST00000476267 FNBP4Q8N3X1 1017 aaPredicted RBP19.57■□□□□ 0.72
MRPL55-228ENST00000476267 ACIN1Q9UKV3 1341 aaKnown RBP19.56■□□□□ 0.72
MRPL55-228ENST00000476267 STK26Q9P289 416 aa19.56■□□□□ 0.72
MRPL55-228ENST00000476267 RGPD8O14715 1765 aaPredicted RBP19.55■□□□□ 0.72
MRPL55-228ENST00000476267 ATRNO75882 1429 aa19.55■□□□□ 0.72
MRPL55-228ENST00000476267 NGLY1Q96IV0 654 aa19.55■□□□□ 0.72
MRPL55-228ENST00000476267 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.54■□□□□ 0.72
MRPL55-228ENST00000476267 SIRT1Q96EB6 747 aa19.54■□□□□ 0.72
MRPL55-228ENST00000476267 C14orf93Q9H972 538 aaKnown RBP19.54■□□□□ 0.72
MRPL55-228ENST00000476267 BCL9LQ86UU0 1499 aa19.54■□□□□ 0.72
MRPL55-228ENST00000476267 FOXO3O43524 673 aa19.53■□□□□ 0.72
MRPL55-228ENST00000476267 USP21Q9UK80 565 aa19.52■□□□□ 0.72
MRPL55-228ENST00000476267 RAB3GAP2Q9H2M9 1393 aa19.52■□□□□ 0.72
MRPL55-228ENST00000476267 ADGRB1O14514 1584 aa19.52■□□□□ 0.71
MRPL55-228ENST00000476267 DLC1Q96QB1 1528 aa19.51■□□□□ 0.71
MRPL55-228ENST00000476267 USP32Q8NFA0 1604 aa19.51■□□□□ 0.71
MRPL55-228ENST00000476267 ADGRB2O60241 1585 aa19.51■□□□□ 0.71
MRPL55-228ENST00000476267 NUTM2FA1L443 756 aa19.5■□□□□ 0.71
MRPL55-228ENST00000476267 XPCQ01831 940 aaPredicted RBP19.5■□□□□ 0.71
MRPL55-228ENST00000476267 TRPC5Q9UL62 973 aaPredicted RBP19.5■□□□□ 0.71
MRPL55-228ENST00000476267 ABCA3Q99758 1704 aa19.49■□□□□ 0.71
MRPL55-228ENST00000476267 CFAP70Q5T0N1 1121 aa19.49■□□□□ 0.71
MRPL55-228ENST00000476267 EP400Q96L91 3159 aa19.48■□□□□ 0.71
MRPL55-228ENST00000476267 SPATA31A3Q5VYP0 1347 aa19.48■□□□□ 0.71
MRPL55-228ENST00000476267 DHX57Q6P158 1386 aaKnown RBP19.47■□□□□ 0.71
MRPL55-228ENST00000476267 SLIT2O94813 1529 aa19.47■□□□□ 0.71
MRPL55-228ENST00000476267 GLI3P10071 1580 aa19.45■□□□□ 0.7
MRPL55-228ENST00000476267 ATAD2Q6PL18 1390 aa19.44■□□□□ 0.7
MRPL55-228ENST00000476267 TNS3Q68CZ2 1445 aa19.44■□□□□ 0.7
MRPL55-228ENST00000476267 TRPM3Q9HCF6 1732 aaPredicted RBP19.43■□□□□ 0.7
MRPL55-228ENST00000476267 PLCH1Q4KWH8 1693 aa19.43■□□□□ 0.7
MRPL55-228ENST00000476267 PRAM1Q96QH2 718 aa19.42■□□□□ 0.7
MRPL55-228ENST00000476267 ANKARQ7Z5J8 1434 aa19.42■□□□□ 0.7
MRPL55-228ENST00000476267 KRT28Q7Z3Y7 464 aa19.41■□□□□ 0.7
MRPL55-228ENST00000476267 PHF8Q9UPP1 1060 aa19.41■□□□□ 0.7
MRPL55-228ENST00000476267 NWD2Q9ULI1 1742 aa19.41■□□□□ 0.7
MRPL55-228ENST00000476267 SBNO1A3KN83 1393 aa19.41■□□□□ 0.7
MRPL55-228ENST00000476267 RALGAPBQ86X10 1494 aa19.4■□□□□ 0.7
MRPL55-228ENST00000476267 ALS2Q96Q42 1657 aa19.4■□□□□ 0.7
MRPL55-228ENST00000476267 GJD4Q96KN9 370 aaPredicted RBP19.39■□□□□ 0.69
MRPL55-228ENST00000476267 ARHGEF28Q8N1W1 1705 aaKnown RBP19.38■□□□□ 0.69
MRPL55-228ENST00000476267 BRWD3Q6RI45 1802 aa19.37■□□□□ 0.69
MRPL55-228ENST00000476267 CRYBG1Q9Y4K1 1723 aa19.37■□□□□ 0.69
MRPL55-228ENST00000476267 TULP4Q9NRJ4 1543 aa19.37■□□□□ 0.69
MRPL55-228ENST00000476267 UNC5CLQ8IV45 518 aa19.37■□□□□ 0.69
MRPL55-228ENST00000476267 SAFB2Q14151 953 aaKnown RBP eCLIP19.36■□□□□ 0.69
MRPL55-228ENST00000476267 NRAPQ86VF7 1730 aa19.36■□□□□ 0.69
MRPL55-228ENST00000476267 ARHGEF10O15013 1369 aa19.34■□□□□ 0.69
MRPL55-228ENST00000476267 HRCP23327 699 aa19.34■□□□□ 0.69
MRPL55-228ENST00000476267 PSME1Q06323 249 aa19.34■□□□□ 0.69
MRPL55-228ENST00000476267 PRR36Q9H6K5 1346 aa19.33■□□□□ 0.69
MRPL55-228ENST00000476267 CABLES1Q8TDN4 633 aa19.33■□□□□ 0.68
MRPL55-228ENST00000476267 POGKQ9P215 609 aa19.32■□□□□ 0.68
MRPL55-228ENST00000476267 TRAK1Q9UPV9 953 aa19.32■□□□□ 0.68
MRPL55-228ENST00000476267 DCAF11Q8TEB1 546 aa19.31■□□□□ 0.68
MRPL55-228ENST00000476267 STAC3Q96MF2 364 aa19.31■□□□□ 0.68
MRPL55-228ENST00000476267 ITSN1Q15811 1721 aa19.31■□□□□ 0.68
MRPL55-228ENST00000476267 PMFBP1Q8TBY8 1022 aa19.3■□□□□ 0.68
MRPL55-228ENST00000476267 HIRIP3Q9BW71 556 aaPredicted RBP19.3■□□□□ 0.68
MRPL55-228ENST00000476267 EIF3AQ14152 1382 aaKnown RBP19.3■□□□□ 0.68
MRPL55-228ENST00000476267 ATP7BP35670 1465 aa19.29■□□□□ 0.68
MRPL55-228ENST00000476267 KIAA1210Q9ULL0 1709 aa19.29■□□□□ 0.68
MRPL55-228ENST00000476267 VPS72Q15906 364 aa19.29■□□□□ 0.68
MRPL55-228ENST00000476267 COL14A1Q05707 1796 aaKnown RBP19.29■□□□□ 0.68
MRPL55-228ENST00000476267 SRCAPQ6ZRS2 3230 aa19.28■□□□□ 0.68
MRPL55-228ENST00000476267 TOPAZ1Q8N9V7 1692 aa19.28■□□□□ 0.68
MRPL55-228ENST00000476267 CCDC125Q86Z20 511 aa19.28■□□□□ 0.68
MRPL55-228ENST00000476267 MINK1Q8N4C8 1332 aaPredicted RBP19.27■□□□□ 0.68
MRPL55-228ENST00000476267 WASLO00401 505 aaPredicted RBP19.27■□□□□ 0.68
MRPL55-228ENST00000476267 ONECUT3O60422 494 aaPredicted RBP19.27■□□□□ 0.68
MRPL55-228ENST00000476267 KDM2AQ9Y2K7 1162 aa19.27■□□□□ 0.68
MRPL55-228ENST00000476267 BLMP54132 1417 aaPredicted RBP19.25■□□□□ 0.67
MRPL55-228ENST00000476267 FAM83GA6ND36 823 aa19.25■□□□□ 0.67
MRPL55-228ENST00000476267 HAP1P54257 671 aaPredicted RBP19.24■□□□□ 0.67
MRPL55-228ENST00000476267 PHRF1Q9P1Y6 1649 aaKnown RBP19.24■□□□□ 0.67
MRPL55-228ENST00000476267 GPRASP1Q5JY77 1395 aa19.23■□□□□ 0.67
MRPL55-228ENST00000476267 LMOD2Q6P5Q4 547 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms