RNA–Protein interactions for RNA: ENST00000476178.1

SATB1-213, Transcript of SATB homeobox 1, humanhuman

TSL 3

Gene SATB1, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-213ENST00000476178 QTRT2Q9H974 415 aaKnown RBP12.45□□□□□ -0.42
SATB1-213ENST00000476178 SETD1AO15047 1707 aaKnown RBP12.45□□□□□ -0.42
SATB1-213ENST00000476178 NALCNQ8IZF0 1738 aa12.45□□□□□ -0.42
SATB1-213ENST00000476178 PNPLA6Q8IY17 1366 aa12.44□□□□□ -0.42
SATB1-213ENST00000476178 NHSL1Q5SYE7 1610 aa12.43□□□□□ -0.42
SATB1-213ENST00000476178 SOS2Q07890 1332 aaPredicted RBP12.42□□□□□ -0.42
SATB1-213ENST00000476178 FOXO3O43524 673 aa12.42□□□□□ -0.42
SATB1-213ENST00000476178 XPCQ01831 940 aaPredicted RBP12.42□□□□□ -0.42
SATB1-213ENST00000476178 PRAG1Q86YV5 1406 aa12.42□□□□□ -0.42
SATB1-213ENST00000476178 LRPPRCP42704 1394 aaKnown RBP12.42□□□□□ -0.42
SATB1-213ENST00000476178 NPHP3Q7Z494 1330 aa12.41□□□□□ -0.42
SATB1-213ENST00000476178 RBM6P78332 1123 aaKnown RBP12.41□□□□□ -0.42
SATB1-213ENST00000476178 UPF1Q92900 1129 aaKnown RBP eCLIP12.4□□□□□ -0.42
SATB1-213ENST00000476178 USP21Q9UK80 565 aa12.4□□□□□ -0.42
SATB1-213ENST00000476178 ABCC11Q96J66 1382 aa12.4□□□□□ -0.42
SATB1-213ENST00000476178 IFT172Q9UG01 1749 aa12.4□□□□□ -0.43
SATB1-213ENST00000476178 CFAP70Q5T0N1 1121 aa12.39□□□□□ -0.43
SATB1-213ENST00000476178 C14orf93Q9H972 538 aaKnown RBP12.39□□□□□ -0.43
SATB1-213ENST00000476178 PIK3C2GO75747 1445 aa12.38□□□□□ -0.43
SATB1-213ENST00000476178 SAFB2Q14151 953 aaKnown RBP eCLIP12.38□□□□□ -0.43
SATB1-213ENST00000476178 DHX57Q6P158 1386 aaKnown RBP12.38□□□□□ -0.43
SATB1-213ENST00000476178 PLEKHH1Q9ULM0 1364 aa12.38□□□□□ -0.43
SATB1-213ENST00000476178 YTHDC2Q9H6S0 1430 aaKnown RBP12.37□□□□□ -0.43
SATB1-213ENST00000476178 POGKQ9P215 609 aa12.37□□□□□ -0.43
SATB1-213ENST00000476178 TRPC5Q9UL62 973 aaPredicted RBP12.37□□□□□ -0.43
SATB1-213ENST00000476178 KDM2AQ9Y2K7 1162 aa12.37□□□□□ -0.43
SATB1-213ENST00000476178 NRXN1Q9ULB1 1477 aa12.36□□□□□ -0.43
SATB1-213ENST00000476178 SIRT1Q96EB6 747 aa12.36□□□□□ -0.43
SATB1-213ENST00000476178 TECPR2O15040 1411 aa12.36□□□□□ -0.43
SATB1-213ENST00000476178 CDC42BPGQ6DT37 1551 aa12.35□□□□□ -0.43
SATB1-213ENST00000476178 CDK12Q9NYV4 1490 aaPredicted RBP12.35□□□□□ -0.43
SATB1-213ENST00000476178 PLEKHG5O94827 1062 aa12.35□□□□□ -0.43
SATB1-213ENST00000476178 HAP1P54257 671 aaPredicted RBP12.35□□□□□ -0.43
SATB1-213ENST00000476178 KRT28Q7Z3Y7 464 aa12.35□□□□□ -0.43
SATB1-213ENST00000476178 PRAM1Q96QH2 718 aa12.35□□□□□ -0.43
SATB1-213ENST00000476178 MYOM2P54296 1465 aa12.34□□□□□ -0.43
SATB1-213ENST00000476178 FNBP4Q8N3X1 1017 aaPredicted RBP12.34□□□□□ -0.43
SATB1-213ENST00000476178 LAMC1P11047 1609 aa12.33□□□□□ -0.43
SATB1-213ENST00000476178 PSME1Q06323 249 aa12.33□□□□□ -0.44
SATB1-213ENST00000476178 LMOD2Q6P5Q4 547 aa12.33□□□□□ -0.44
SATB1-213ENST00000476178 DCAF11Q8TEB1 546 aa12.33□□□□□ -0.44
SATB1-213ENST00000476178 PHF8Q9UPP1 1060 aa12.33□□□□□ -0.44
SATB1-213ENST00000476178 RGS12O14924 1447 aa12.32□□□□□ -0.44
SATB1-213ENST00000476178 TRAK1Q9UPV9 953 aa12.32□□□□□ -0.44
SATB1-213ENST00000476178 PXDNQ92626 1479 aa12.31□□□□□ -0.44
SATB1-213ENST00000476178 SPATA31A3Q5VYP0 1347 aa12.31□□□□□ -0.44
SATB1-213ENST00000476178 HIRIP3Q9BW71 556 aaPredicted RBP12.3□□□□□ -0.44
SATB1-213ENST00000476178 KNDC1Q76NI1 1749 aa12.29□□□□□ -0.44
SATB1-213ENST00000476178 PMFBP1Q8TBY8 1022 aa12.29□□□□□ -0.44
SATB1-213ENST00000476178 CABLES1Q8TDN4 633 aa12.29□□□□□ -0.44
SATB1-213ENST00000476178 STAC3Q96MF2 364 aa12.29□□□□□ -0.44
SATB1-213ENST00000476178 MINK1Q8N4C8 1332 aaPredicted RBP12.29□□□□□ -0.44
SATB1-213ENST00000476178 ATAD2Q6PL18 1390 aa12.29□□□□□ -0.44
SATB1-213ENST00000476178 GJD4Q96KN9 370 aaPredicted RBP12.28□□□□□ -0.44
SATB1-213ENST00000476178 ATRNO75882 1429 aa12.28□□□□□ -0.44
SATB1-213ENST00000476178 ADGRB1O14514 1584 aa12.27□□□□□ -0.44
SATB1-213ENST00000476178 COL22A1Q8NFW1 1626 aaPredicted RBP12.27□□□□□ -0.44
SATB1-213ENST00000476178 UNC5CLQ8IV45 518 aa12.27□□□□□ -0.45
SATB1-213ENST00000476178 CCDC9Q9Y3X0 531 aaKnown RBP12.27□□□□□ -0.45
SATB1-213ENST00000476178 FMN2Q9NZ56 1722 aa12.27□□□□□ -0.45
SATB1-213ENST00000476178 BCL9LQ86UU0 1499 aa12.26□□□□□ -0.45
SATB1-213ENST00000476178 KIF1AQ12756 1690 aa12.26□□□□□ -0.45
SATB1-213ENST00000476178 DLC1Q96QB1 1528 aa12.25□□□□□ -0.45
SATB1-213ENST00000476178 SBNO1A3KN83 1393 aa12.24□□□□□ -0.45
SATB1-213ENST00000476178 WASLO00401 505 aaPredicted RBP12.24□□□□□ -0.45
SATB1-213ENST00000476178 ARHGEF10O15013 1369 aa12.24□□□□□ -0.45
SATB1-213ENST00000476178 GPRASP1Q5JY77 1395 aa12.24□□□□□ -0.45
SATB1-213ENST00000476178 TNS3Q68CZ2 1445 aa12.24□□□□□ -0.45
SATB1-213ENST00000476178 NGDNQ8NEJ9 315 aaKnown RBP12.24□□□□□ -0.45
SATB1-213ENST00000476178 EIF3AQ14152 1382 aaKnown RBP12.23□□□□□ -0.45
SATB1-213ENST00000476178 PAK3O75914 559 aaPredicted RBP12.23□□□□□ -0.45
SATB1-213ENST00000476178 RGPD8O14715 1765 aaPredicted RBP12.23□□□□□ -0.45
SATB1-213ENST00000476178 ANKARQ7Z5J8 1434 aa12.22□□□□□ -0.45
SATB1-213ENST00000476178 CCDC125Q86Z20 511 aa12.22□□□□□ -0.45
SATB1-213ENST00000476178 A0A0G2JS52 829 aa12.21□□□□□ -0.45
SATB1-213ENST00000476178 FAM83GA6ND36 823 aa12.21□□□□□ -0.45
SATB1-213ENST00000476178 MYT1Q01538 1121 aa12.21□□□□□ -0.45
SATB1-213ENST00000476178 PRR36Q9H6K5 1346 aa12.2□□□□□ -0.46
SATB1-213ENST00000476178 VPS72Q15906 364 aa12.2□□□□□ -0.46
SATB1-213ENST00000476178 SEPT12Q8IYM1 358 aa12.2□□□□□ -0.46
SATB1-213ENST00000476178 ZRANB1Q9UGI0 708 aa12.2□□□□□ -0.46
SATB1-213ENST00000476178 SLIT2O94813 1529 aa12.2□□□□□ -0.46
SATB1-213ENST00000476178 RALGAPBQ86X10 1494 aa12.2□□□□□ -0.46
SATB1-213ENST00000476178 MARF1Q9Y4F3 1742 aaKnown RBP12.2□□□□□ -0.46
SATB1-213ENST00000476178 NUDT16Q96DE0 195 aaKnown RBP12.19□□□□□ -0.46
SATB1-213ENST00000476178 CDK19Q9BWU1 502 aa12.19□□□□□ -0.46
SATB1-213ENST00000476178 SF3B2Q13435 895 aaKnown RBP12.18□□□□□ -0.46
SATB1-213ENST00000476178 NBPF1Q3BBV0 1214 aa12.18□□□□□ -0.46
SATB1-213ENST00000476178 SIN3AQ96ST3 1273 aa12.18□□□□□ -0.46
SATB1-213ENST00000476178 BTG4Q9NY30 223 aa12.18□□□□□ -0.46
SATB1-213ENST00000476178 USP32Q8NFA0 1604 aa12.18□□□□□ -0.46
SATB1-213ENST00000476178 ADGRB2O60241 1585 aa12.18□□□□□ -0.46
SATB1-213ENST00000476178 L3MBTL2Q969R5 705 aa12.17□□□□□ -0.46
SATB1-213ENST00000476178 KRT27Q7Z3Y8 459 aa12.16□□□□□ -0.46
SATB1-213ENST00000476178 PRDM11Q9NQV5 511 aa12.16□□□□□ -0.46
SATB1-213ENST00000476178 TULP4Q9NRJ4 1543 aa12.16□□□□□ -0.46
SATB1-213ENST00000476178 FAM98CQ17RN3 349 aaKnown RBP12.15□□□□□ -0.46
SATB1-213ENST00000476178 NUTM2GQ5VZR2 741 aa12.15□□□□□ -0.46
SATB1-213ENST00000476178 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.14□□□□□ -0.47
SATB1-213ENST00000476178 KIAA1210Q9ULL0 1709 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms