RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 MORC1Q86VD1 984 aa21.07■□□□□ 0.96
VARS2-207ENST00000476162 PUS7Q96PZ0 661 aaKnown RBP21.06■□□□□ 0.96
VARS2-207ENST00000476162 PLIN1O60240 522 aa21.06■□□□□ 0.96
VARS2-207ENST00000476162 TULP4Q9NRJ4 1543 aa21.06■□□□□ 0.96
VARS2-207ENST00000476162 GOLGA2Q08379 1002 aa21.05■□□□□ 0.96
VARS2-207ENST00000476162 DUSP27Q5VZP5 1158 aa21.05■□□□□ 0.96
VARS2-207ENST00000476162 APAF1O14727 1248 aa21.05■□□□□ 0.96
VARS2-207ENST00000476162 TNNT2P45379 298 aaPredicted RBP21.05■□□□□ 0.96
VARS2-207ENST00000476162 CABP2Q9NPB3 220 aa21.05■□□□□ 0.96
VARS2-207ENST00000476162 POLR3AO14802 1390 aaPredicted RBP21.04■□□□□ 0.96
VARS2-207ENST00000476162 STAG3Q9UJ98 1225 aa21.02■□□□□ 0.96
VARS2-207ENST00000476162 CGNL1Q0VF96 1302 aa21.02■□□□□ 0.96
VARS2-207ENST00000476162 PPP6R1Q9UPN7 881 aa21.02■□□□□ 0.96
VARS2-207ENST00000476162 REREQ9P2R6 1566 aa21.02■□□□□ 0.96
VARS2-207ENST00000476162 AGLP35573 1532 aa21.02■□□□□ 0.96
VARS2-207ENST00000476162 ANKRD36BQ8N2N9 1353 aa21■□□□□ 0.95
VARS2-207ENST00000476162 SLFN5Q08AF3 891 aa21■□□□□ 0.95
VARS2-207ENST00000476162 MLECQ14165 292 aa21■□□□□ 0.95
VARS2-207ENST00000476162 PRAM1Q96QH2 718 aa20.98■□□□□ 0.95
VARS2-207ENST00000476162 USP32Q8NFA0 1604 aa20.97■□□□□ 0.95
VARS2-207ENST00000476162 SRPK2P78362 688 aaKnown RBP20.97■□□□□ 0.95
VARS2-207ENST00000476162 PTPRMP28827 1452 aa20.97■□□□□ 0.95
VARS2-207ENST00000476162 YTHDC2Q9H6S0 1430 aaKnown RBP20.97■□□□□ 0.95
VARS2-207ENST00000476162 SPINK5Q9NQ38 1064 aaPredicted RBP20.97■□□□□ 0.95
VARS2-207ENST00000476162 TRMT2AQ8IZ69 625 aaKnown RBP20.96■□□□□ 0.95
VARS2-207ENST00000476162 CRBNQ96SW2 442 aa20.96■□□□□ 0.95
VARS2-207ENST00000476162 MINK1Q8N4C8 1332 aaPredicted RBP20.96■□□□□ 0.95
VARS2-207ENST00000476162 CLTCQ00610 1675 aaKnown RBP20.96■□□□□ 0.95
VARS2-207ENST00000476162 MTHFSP49914 203 aa20.96■□□□□ 0.95
VARS2-207ENST00000476162 POGKQ9P215 609 aa20.96■□□□□ 0.95
VARS2-207ENST00000476162 C20orf194Q5TEA3 1177 aa20.94■□□□□ 0.94
VARS2-207ENST00000476162 ALKQ9UM73 1620 aa20.94■□□□□ 0.94
VARS2-207ENST00000476162 NGEFQ8N5V2 710 aa20.93■□□□□ 0.94
VARS2-207ENST00000476162 A0A1W2PP64 1363 aa20.92■□□□□ 0.94
VARS2-207ENST00000476162 NSD2O96028 1365 aa20.92■□□□□ 0.94
VARS2-207ENST00000476162 DMRT2Q9Y5R5 561 aa20.92■□□□□ 0.94
VARS2-207ENST00000476162 NINLQ9Y2I6 1382 aa20.91■□□□□ 0.94
VARS2-207ENST00000476162 A2ML1A8K2U0 1454 aa20.91■□□□□ 0.94
VARS2-207ENST00000476162 SPATA31D1Q6ZQQ2 1576 aa20.91■□□□□ 0.94
VARS2-207ENST00000476162 SHPRHQ149N8 1683 aa20.91■□□□□ 0.94
VARS2-207ENST00000476162 E9PSI1 815 aa20.9■□□□□ 0.94
VARS2-207ENST00000476162 CFAP53Q96M91 514 aa20.9■□□□□ 0.94
VARS2-207ENST00000476162 ATAD2Q6PL18 1390 aa20.9■□□□□ 0.94
VARS2-207ENST00000476162 WWC1Q8IX03 1113 aa20.89■□□□□ 0.93
VARS2-207ENST00000476162 NKTRP30414 1462 aaKnown RBP20.88■□□□□ 0.93
VARS2-207ENST00000476162 ABCC11Q96J66 1382 aa20.88■□□□□ 0.93
VARS2-207ENST00000476162 RUNDC1Q96C34 613 aa20.88■□□□□ 0.93
VARS2-207ENST00000476162 RIMS2Q9UQ26 1411 aa20.88■□□□□ 0.93
VARS2-207ENST00000476162 UBE2Q2Q8WVN8 375 aa20.87■□□□□ 0.93
VARS2-207ENST00000476162 ARHGEF40Q8TER5 1519 aa20.87■□□□□ 0.93
VARS2-207ENST00000476162 KIF13AQ9H1H9 1805 aa20.87■□□□□ 0.93
VARS2-207ENST00000476162 CDK19Q9BWU1 502 aa20.86■□□□□ 0.93
VARS2-207ENST00000476162 TERF2IPQ9NYB0 399 aa20.86■□□□□ 0.93
VARS2-207ENST00000476162 NEUROD2Q15784 382 aa20.86■□□□□ 0.93
VARS2-207ENST00000476162 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.86■□□□□ 0.93
VARS2-207ENST00000476162 GGNBP2Q9H3C7 697 aa20.86■□□□□ 0.93
VARS2-207ENST00000476162 TCP11L2Q8N4U5 519 aa20.85■□□□□ 0.93
VARS2-207ENST00000476162 RRP7AQ9Y3A4 280 aaKnown RBP20.85■□□□□ 0.93
VARS2-207ENST00000476162 ESF1Q9H501 851 aaKnown RBP20.85■□□□□ 0.93
VARS2-207ENST00000476162 NOP58Q9Y2X3 529 aaKnown RBP20.84■□□□□ 0.93
VARS2-207ENST00000476162 ZMYM3Q14202 1370 aa20.84■□□□□ 0.93
VARS2-207ENST00000476162 CD163L1Q9NR16 1453 aa20.84■□□□□ 0.93
VARS2-207ENST00000476162 WAPLQ7Z5K2 1190 aa20.84■□□□□ 0.93
VARS2-207ENST00000476162 FYB1O15117 783 aa20.83■□□□□ 0.93
VARS2-207ENST00000476162 BCAR3O75815 825 aa20.82■□□□□ 0.92
VARS2-207ENST00000476162 NBR1Q14596 966 aa20.82■□□□□ 0.92
VARS2-207ENST00000476162 CABP1Q9NZU7 370 aa20.82■□□□□ 0.92
VARS2-207ENST00000476162 IQSEC2Q5JU85 1478 aa20.81■□□□□ 0.92
VARS2-207ENST00000476162 U2AF1L5P0DN76 240 aaPredicted RBP20.81■□□□□ 0.92
VARS2-207ENST00000476162 U2AF1Q01081 240 aaKnown RBP eCLIP20.81■□□□□ 0.92
VARS2-207ENST00000476162 HDGFL2Q7Z4V5 671 aaPredicted RBP20.81■□□□□ 0.92
VARS2-207ENST00000476162 TCERG1O14776 1098 aaKnown RBP20.8■□□□□ 0.92
VARS2-207ENST00000476162 PHF23Q9BUL5 403 aaPredicted RBP20.8■□□□□ 0.92
VARS2-207ENST00000476162 DLC1Q96QB1 1528 aa20.78■□□□□ 0.92
VARS2-207ENST00000476162 NLRP1Q9C000 1473 aa20.77■□□□□ 0.92
VARS2-207ENST00000476162 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.77■□□□□ 0.92
VARS2-207ENST00000476162 PAK3O75914 559 aaPredicted RBP20.77■□□□□ 0.91
VARS2-207ENST00000476162 SETD1AO15047 1707 aaKnown RBP20.77■□□□□ 0.91
VARS2-207ENST00000476162 CCDC27Q2M243 656 aa20.76■□□□□ 0.91
VARS2-207ENST00000476162 WDR63Q8IWG1 891 aa20.76■□□□□ 0.91
VARS2-207ENST00000476162 METP08581 1390 aa20.75■□□□□ 0.91
VARS2-207ENST00000476162 MED14O60244 1454 aa20.75■□□□□ 0.91
VARS2-207ENST00000476162 KDM2BQ8NHM5 1336 aa20.74■□□□□ 0.91
VARS2-207ENST00000476162 IL27Q8NEV9 243 aa20.74■□□□□ 0.91
VARS2-207ENST00000476162 U2SURPO15042 1029 aaKnown RBP20.74■□□□□ 0.91
VARS2-207ENST00000476162 SKAP1Q86WV1 359 aa20.74■□□□□ 0.91
VARS2-207ENST00000476162 NRXN3Q9Y4C0 1643 aa20.73■□□□□ 0.91
VARS2-207ENST00000476162 MS4A1P11836 297 aa20.73■□□□□ 0.91
VARS2-207ENST00000476162 TNRQ92752 1358 aa20.72■□□□□ 0.91
VARS2-207ENST00000476162 TXNDC2Q86VQ3 553 aa20.72■□□□□ 0.91
VARS2-207ENST00000476162 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.72■□□□□ 0.91
VARS2-207ENST00000476162 COL3A1P02461 1466 aaPredicted RBP20.71■□□□□ 0.91
VARS2-207ENST00000476162 HDGFP51858 240 aaKnown RBP20.71■□□□□ 0.91
VARS2-207ENST00000476162 NCBP3Q53F19 620 aaKnown RBP20.71■□□□□ 0.91
VARS2-207ENST00000476162 CENPQQ7L2Z9 268 aaPredicted RBP20.71■□□□□ 0.91
VARS2-207ENST00000476162 ANKRD26Q9UPS8 1709 aa20.71■□□□□ 0.91
VARS2-207ENST00000476162 PDE4AP27815 886 aa20.7■□□□□ 0.9
VARS2-207ENST00000476162 PLEKHF1Q96S99 279 aa20.7■□□□□ 0.9
VARS2-207ENST00000476162 WASLO00401 505 aaPredicted RBP20.7■□□□□ 0.9
VARS2-207ENST00000476162 PDE3AQ14432 1141 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms