RNA–Protein interactions for RNA: ENST00000476034.5

PDE6B-209, Transcript of phosphodiesterase 6B, humanhuman

TSL 1 (best)

Gene PDE6B, Length 1,012 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-209ENST00000476034 ARHGEF28Q8N1W1 1705 aaKnown RBP27.75■■■□□ 2.03
PDE6B-209ENST00000476034 AHDC1Q5TGY3 1603 aaPredicted RBP27.74■■■□□ 2.03
PDE6B-209ENST00000476034 PRAM1Q96QH2 718 aa27.73■■■□□ 2.03
PDE6B-209ENST00000476034 TRPM1Q7Z4N2 1603 aa27.73■■■□□ 2.03
PDE6B-209ENST00000476034 C1orf167Q5SNV9 1468 aa27.72■■■□□ 2.03
PDE6B-209ENST00000476034 TRAK1Q9UPV9 953 aa27.72■■■□□ 2.03
PDE6B-209ENST00000476034 FMN2Q9NZ56 1722 aa27.72■■■□□ 2.03
PDE6B-209ENST00000476034 TONSLQ96HA7 1378 aa27.72■■■□□ 2.03
PDE6B-209ENST00000476034 BRINP3Q76B58 766 aa27.71■■■□□ 2.03
PDE6B-209ENST00000476034 ADGRB2O60241 1585 aa27.7■■■□□ 2.03
PDE6B-209ENST00000476034 POGKQ9P215 609 aa27.7■■■□□ 2.02
PDE6B-209ENST00000476034 COL16A1Q07092 1604 aaPredicted RBP27.7■■■□□ 2.02
PDE6B-209ENST00000476034 NHSL1Q5SYE7 1610 aa27.7■■■□□ 2.02
PDE6B-209ENST00000476034 SAFB2Q14151 953 aaKnown RBP eCLIP27.65■■■□□ 2.02
PDE6B-209ENST00000476034 NBPF1Q3BBV0 1214 aa27.65■■■□□ 2.02
PDE6B-209ENST00000476034 CLSPNQ9HAW4 1339 aa27.64■■■□□ 2.01
PDE6B-209ENST00000476034 ORAI2Q96SN7 254 aa27.59■■■□□ 2.01
PDE6B-209ENST00000476034 MED1Q15648 1581 aaPredicted RBP27.59■■■□□ 2.01
PDE6B-209ENST00000476034 KIF1AQ12756 1690 aa27.58■■■□□ 2.01
PDE6B-209ENST00000476034 ROCK2O75116 1388 aaKnown RBP27.58■■■□□ 2.01
PDE6B-209ENST00000476034 RGPD8O14715 1765 aaPredicted RBP27.58■■■□□ 2
PDE6B-209ENST00000476034 SHPRHQ149N8 1683 aa27.56■■■□□ 2
PDE6B-209ENST00000476034 NBPF8Q3BBV2 869 aa27.56■■■□□ 2
PDE6B-209ENST00000476034 MINK1Q8N4C8 1332 aaPredicted RBP27.56■■■□□ 2
PDE6B-209ENST00000476034 JCADQ9P266 1359 aa27.56■■■□□ 2
PDE6B-209ENST00000476034 NUTM2FA1L443 756 aa27.55■■■□□ 2
PDE6B-209ENST00000476034 ESCO1Q5FWF5 840 aa27.55■■■□□ 2
PDE6B-209ENST00000476034 USP32Q8NFA0 1604 aa27.55■■■□□ 2
PDE6B-209ENST00000476034 EIF3AQ14152 1382 aaKnown RBP27.54■■■□□ 2
PDE6B-209ENST00000476034 ANKARQ7Z5J8 1434 aa27.54■■■□□ 2
PDE6B-209ENST00000476034 RALGAPBQ86X10 1494 aa27.54■■■□□ 2
PDE6B-209ENST00000476034 HIRIP3Q9BW71 556 aaPredicted RBP27.54■■■□□ 2
PDE6B-209ENST00000476034 QRICH2Q9H0J4 1663 aa27.54■■■□□ 2
PDE6B-209ENST00000476034 GPRASP1Q5JY77 1395 aa27.53■■■□□ 2
PDE6B-209ENST00000476034 TULP4Q9NRJ4 1543 aa27.52■■■□□ 2
PDE6B-209ENST00000476034 CENPJQ9HC77 1338 aaPredicted RBP27.5■■□□□ 1.99
PDE6B-209ENST00000476034 WASLO00401 505 aaPredicted RBP27.5■■□□□ 1.99
PDE6B-209ENST00000476034 DDX17Q92841 729 aaKnown RBP27.5■■□□□ 1.99
PDE6B-209ENST00000476034 NPHP3Q7Z494 1330 aa27.49■■□□□ 1.99
PDE6B-209ENST00000476034 CCER1Q8TC90 406 aaPredicted RBP27.49■■□□□ 1.99
PDE6B-209ENST00000476034 DISP3Q9P2K9 1392 aa27.48■■□□□ 1.99
PDE6B-209ENST00000476034 ITSN1Q15811 1721 aa27.47■■□□□ 1.99
PDE6B-209ENST00000476034 SOS2Q07890 1332 aaPredicted RBP27.47■■□□□ 1.99
PDE6B-209ENST00000476034 LRRC59Q96AG4 307 aaKnown RBP27.47■■□□□ 1.99
PDE6B-209ENST00000476034 TIMELESSQ9UNS1 1208 aa27.47■■□□□ 1.99
PDE6B-209ENST00000476034 PXDNQ92626 1479 aa27.46■■□□□ 1.99
PDE6B-209ENST00000476034 SPATA31A6Q5VVP1 1343 aa27.43■■□□□ 1.98
PDE6B-209ENST00000476034 FOXO3O43524 673 aa27.43■■□□□ 1.98
PDE6B-209ENST00000476034 PHF8Q9UPP1 1060 aa27.43■■□□□ 1.98
PDE6B-209ENST00000476034 ATP7BP35670 1465 aa27.43■■□□□ 1.98
PDE6B-209ENST00000476034 CARD11Q9BXL7 1154 aa27.42■■□□□ 1.98
PDE6B-209ENST00000476034 PRR36Q9H6K5 1346 aa27.41■■□□□ 1.98
PDE6B-209ENST00000476034 TOPAZ1Q8N9V7 1692 aa27.41■■□□□ 1.98
PDE6B-209ENST00000476034 PNPLA6Q8IY17 1366 aa27.39■■□□□ 1.98
PDE6B-209ENST00000476034 CDK19Q9BWU1 502 aa27.39■■□□□ 1.98
PDE6B-209ENST00000476034 COL22A1Q8NFW1 1626 aaPredicted RBP27.38■■□□□ 1.97
PDE6B-209ENST00000476034 LRP6O75581 1613 aa27.37■■□□□ 1.97
PDE6B-209ENST00000476034 XPCQ01831 940 aaPredicted RBP27.36■■□□□ 1.97
PDE6B-209ENST00000476034 NUDT16Q96DE0 195 aaKnown RBP27.36■■□□□ 1.97
PDE6B-209ENST00000476034 PMFBP1Q8TBY8 1022 aa27.34■■□□□ 1.97
PDE6B-209ENST00000476034 PHF23Q9BUL5 403 aaPredicted RBP27.34■■□□□ 1.97
PDE6B-209ENST00000476034 SBNO2Q9Y2G9 1366 aa27.33■■□□□ 1.97
PDE6B-209ENST00000476034 SRPK2P78362 688 aaKnown RBP27.32■■□□□ 1.96
PDE6B-209ENST00000476034 KRT28Q7Z3Y7 464 aa27.32■■□□□ 1.96
PDE6B-209ENST00000476034 TRPM3Q9HCF6 1732 aaPredicted RBP27.31■■□□□ 1.96
PDE6B-209ENST00000476034 PSME1Q06323 249 aa27.31■■□□□ 1.96
PDE6B-209ENST00000476034 EVC2Q86UK5 1308 aa27.31■■□□□ 1.96
PDE6B-209ENST00000476034 CCDC61Q9Y6R9 512 aa27.29■■□□□ 1.96
PDE6B-209ENST00000476034 SPATA31A3Q5VYP0 1347 aa27.29■■□□□ 1.96
PDE6B-209ENST00000476034 SBNO1A3KN83 1393 aa27.29■■□□□ 1.96
PDE6B-209ENST00000476034 TNS3Q68CZ2 1445 aa27.29■■□□□ 1.96
PDE6B-209ENST00000476034 NUTM2BA6NNL0 878 aaPredicted RBP27.28■■□□□ 1.96
PDE6B-209ENST00000476034 NUTM2EB1AL46 878 aaPredicted RBP27.28■■□□□ 1.96
PDE6B-209ENST00000476034 NUTM2AQ8IVF1 878 aaPredicted RBP27.28■■□□□ 1.96
PDE6B-209ENST00000476034 NGDNQ8NEJ9 315 aaKnown RBP27.27■■□□□ 1.96
PDE6B-209ENST00000476034 CABP2Q9NPB3 220 aa27.27■■□□□ 1.96
PDE6B-209ENST00000476034 MEX3CQ5U5Q3 659 aaKnown RBP27.26■■□□□ 1.95
PDE6B-209ENST00000476034 PPIP5K1Q6PFW1 1433 aa27.25■■□□□ 1.95
PDE6B-209ENST00000476034 POLR3AO14802 1390 aaPredicted RBP27.24■■□□□ 1.95
PDE6B-209ENST00000476034 ALS2Q96Q42 1657 aa27.24■■□□□ 1.95
PDE6B-209ENST00000476034 PLEKHG3A1L390 1219 aa27.23■■□□□ 1.95
PDE6B-209ENST00000476034 ARHGEF10O15013 1369 aa27.22■■□□□ 1.95
PDE6B-209ENST00000476034 MARF1Q9Y4F3 1742 aaKnown RBP27.21■■□□□ 1.95
PDE6B-209ENST00000476034 USP47Q96K76 1375 aa27.21■■□□□ 1.95
PDE6B-209ENST00000476034 ACEP12821 1306 aa27.2■■□□□ 1.95
PDE6B-209ENST00000476034 ABCA3Q99758 1704 aa27.2■■□□□ 1.94
PDE6B-209ENST00000476034 RGS17Q9UGC6 210 aaPredicted RBP27.19■■□□□ 1.94
PDE6B-209ENST00000476034 ATAD2Q6PL18 1390 aa27.19■■□□□ 1.94
PDE6B-209ENST00000476034 ST20-MTHFSA0A0A6YYL1 179 aa27.17■■□□□ 1.94
PDE6B-209ENST00000476034 LMOD2Q6P5Q4 547 aa27.15■■□□□ 1.94
PDE6B-209ENST00000476034 SLC24A1O60721 1099 aa27.14■■□□□ 1.94
PDE6B-209ENST00000476034 ADAMTS2O95450 1211 aa27.14■■□□□ 1.94
PDE6B-209ENST00000476034 TESK2Q96S53 571 aa27.14■■□□□ 1.94
PDE6B-209ENST00000476034 CABP1Q9NZU7 370 aa27.14■■□□□ 1.94
PDE6B-209ENST00000476034 AKAP12Q02952 1782 aa27.14■■□□□ 1.93
PDE6B-209ENST00000476034 PAK3O75914 559 aaPredicted RBP27.13■■□□□ 1.93
PDE6B-209ENST00000476034 ILDR2Q71H61 639 aa27.13■■□□□ 1.93
PDE6B-209ENST00000476034 CRYBG1Q9Y4K1 1723 aa27.13■■□□□ 1.93
PDE6B-209ENST00000476034 C8orf37Q96NL8 207 aa27.12■■□□□ 1.93
PDE6B-209ENST00000476034 BRD4O60885 1362 aaPredicted RBP27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms