RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 MYOM2P54296 1465 aa16.79■□□□□ 0.28
NUDCD3-206ENST00000475952 PIK3C2GO75747 1445 aa16.79■□□□□ 0.28
NUDCD3-206ENST00000475952 HRCP23327 699 aa16.78■□□□□ 0.28
NUDCD3-206ENST00000475952 QTRT2Q9H974 415 aaKnown RBP16.78■□□□□ 0.28
NUDCD3-206ENST00000475952 LRRC59Q96AG4 307 aaKnown RBP16.76■□□□□ 0.27
NUDCD3-206ENST00000475952 ATAD2Q6PL18 1390 aa16.76■□□□□ 0.27
NUDCD3-206ENST00000475952 ADGRF5Q8IZF2 1346 aa16.75■□□□□ 0.27
NUDCD3-206ENST00000475952 DDX17Q92841 729 aaKnown RBP16.75■□□□□ 0.27
NUDCD3-206ENST00000475952 NRXN1Q9ULB1 1477 aa16.74■□□□□ 0.27
NUDCD3-206ENST00000475952 CDC42BPGQ6DT37 1551 aa16.74■□□□□ 0.27
NUDCD3-206ENST00000475952 ROBO2Q9HCK4 1378 aa16.74■□□□□ 0.27
NUDCD3-206ENST00000475952 MARF1Q9Y4F3 1742 aaKnown RBP16.73■□□□□ 0.27
NUDCD3-206ENST00000475952 TECPR2O15040 1411 aa16.72■□□□□ 0.27
NUDCD3-206ENST00000475952 COL22A1Q8NFW1 1626 aaPredicted RBP16.72■□□□□ 0.27
NUDCD3-206ENST00000475952 NGLY1Q96IV0 654 aa16.7■□□□□ 0.26
NUDCD3-206ENST00000475952 FMN2Q9NZ56 1722 aa16.7■□□□□ 0.26
NUDCD3-206ENST00000475952 LRPPRCP42704 1394 aaKnown RBP16.69■□□□□ 0.26
NUDCD3-206ENST00000475952 ADAMTS2O95450 1211 aa16.69■□□□□ 0.26
NUDCD3-206ENST00000475952 C1orf167Q5SNV9 1468 aa16.68■□□□□ 0.26
NUDCD3-206ENST00000475952 RGPD8O14715 1765 aaPredicted RBP16.68■□□□□ 0.26
NUDCD3-206ENST00000475952 ATRNO75882 1429 aa16.68■□□□□ 0.26
NUDCD3-206ENST00000475952 YTHDC2Q9H6S0 1430 aaKnown RBP16.68■□□□□ 0.26
NUDCD3-206ENST00000475952 ZRANB1Q9UGI0 708 aa16.67■□□□□ 0.26
NUDCD3-206ENST00000475952 KIAA1210Q9ULL0 1709 aa16.66■□□□□ 0.26
NUDCD3-206ENST00000475952 ABCC11Q96J66 1382 aa16.65■□□□□ 0.26
NUDCD3-206ENST00000475952 USP21Q9UK80 565 aa16.65■□□□□ 0.26
NUDCD3-206ENST00000475952 TRPC5Q9UL62 973 aaPredicted RBP16.65■□□□□ 0.26
NUDCD3-206ENST00000475952 KIF1AQ12756 1690 aa16.65■□□□□ 0.26
NUDCD3-206ENST00000475952 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.65■□□□□ 0.26
NUDCD3-206ENST00000475952 C14orf93Q9H972 538 aaKnown RBP16.64■□□□□ 0.25
NUDCD3-206ENST00000475952 STK26Q9P289 416 aa16.64■□□□□ 0.25
NUDCD3-206ENST00000475952 ARHGEF28Q8N1W1 1705 aaKnown RBP16.64■□□□□ 0.25
NUDCD3-206ENST00000475952 DLC1Q96QB1 1528 aa16.64■□□□□ 0.25
NUDCD3-206ENST00000475952 SOS2Q07890 1332 aaPredicted RBP16.64■□□□□ 0.25
NUDCD3-206ENST00000475952 DHX57Q6P158 1386 aaKnown RBP16.64■□□□□ 0.25
NUDCD3-206ENST00000475952 TMEM132EQ6IEE7 984 aa16.63■□□□□ 0.25
NUDCD3-206ENST00000475952 FNBP4Q8N3X1 1017 aaPredicted RBP16.63■□□□□ 0.25
NUDCD3-206ENST00000475952 ADGRB1O14514 1584 aa16.63■□□□□ 0.25
NUDCD3-206ENST00000475952 BRWD3Q6RI45 1802 aa16.63■□□□□ 0.25
NUDCD3-206ENST00000475952 CFAP70Q5T0N1 1121 aa16.61■□□□□ 0.25
NUDCD3-206ENST00000475952 STAC3Q96MF2 364 aa16.61■□□□□ 0.25
NUDCD3-206ENST00000475952 ADGRB2O60241 1585 aa16.6■□□□□ 0.25
NUDCD3-206ENST00000475952 DCAF11Q8TEB1 546 aa16.6■□□□□ 0.25
NUDCD3-206ENST00000475952 BCL9LQ86UU0 1499 aa16.6■□□□□ 0.25
NUDCD3-206ENST00000475952 LRP5O75197 1615 aa16.59■□□□□ 0.25
NUDCD3-206ENST00000475952 ORAI2Q96SN7 254 aa16.59■□□□□ 0.25
NUDCD3-206ENST00000475952 PLEKHH1Q9ULM0 1364 aa16.59■□□□□ 0.25
NUDCD3-206ENST00000475952 WAPLQ7Z5K2 1190 aa16.58■□□□□ 0.24
NUDCD3-206ENST00000475952 ITSN1Q15811 1721 aa16.57■□□□□ 0.24
NUDCD3-206ENST00000475952 GLI3P10071 1580 aa16.57■□□□□ 0.24
NUDCD3-206ENST00000475952 CCDC125Q86Z20 511 aa16.57■□□□□ 0.24
NUDCD3-206ENST00000475952 SIRT1Q96EB6 747 aa16.57■□□□□ 0.24
NUDCD3-206ENST00000475952 KDM2AQ9Y2K7 1162 aa16.57■□□□□ 0.24
NUDCD3-206ENST00000475952 PXDNQ92626 1479 aa16.56■□□□□ 0.24
NUDCD3-206ENST00000475952 USP32Q8NFA0 1604 aa16.54■□□□□ 0.24
NUDCD3-206ENST00000475952 BLMP54132 1417 aaPredicted RBP16.53■□□□□ 0.24
NUDCD3-206ENST00000475952 ESCO1Q5FWF5 840 aa16.52■□□□□ 0.24
NUDCD3-206ENST00000475952 PRAM1Q96QH2 718 aa16.52■□□□□ 0.24
NUDCD3-206ENST00000475952 POGKQ9P215 609 aa16.52■□□□□ 0.24
NUDCD3-206ENST00000475952 NPHP3Q7Z494 1330 aa16.51■□□□□ 0.23
NUDCD3-206ENST00000475952 RALGAPBQ86X10 1494 aa16.51■□□□□ 0.23
NUDCD3-206ENST00000475952 GJD4Q96KN9 370 aaPredicted RBP16.51■□□□□ 0.23
NUDCD3-206ENST00000475952 TRPM1Q7Z4N2 1603 aa16.51■□□□□ 0.23
NUDCD3-206ENST00000475952 NUTM2FA1L443 756 aa16.5■□□□□ 0.23
NUDCD3-206ENST00000475952 SLIT2O94813 1529 aa16.5■□□□□ 0.23
NUDCD3-206ENST00000475952 SAFB2Q14151 953 aaKnown RBP eCLIP16.49■□□□□ 0.23
NUDCD3-206ENST00000475952 ANKARQ7Z5J8 1434 aa16.49■□□□□ 0.23
NUDCD3-206ENST00000475952 TRAK1Q9UPV9 953 aa16.49■□□□□ 0.23
NUDCD3-206ENST00000475952 PLCH1Q4KWH8 1693 aa16.49■□□□□ 0.23
NUDCD3-206ENST00000475952 QRICH2Q9H0J4 1663 aa16.49■□□□□ 0.23
NUDCD3-206ENST00000475952 ABCA3Q99758 1704 aa16.48■□□□□ 0.23
NUDCD3-206ENST00000475952 TULP4Q9NRJ4 1543 aa16.48■□□□□ 0.23
NUDCD3-206ENST00000475952 EIF3AQ14152 1382 aaKnown RBP16.48■□□□□ 0.23
NUDCD3-206ENST00000475952 DEFB132Q7Z7B7 95 aa16.47■□□□□ 0.23
NUDCD3-206ENST00000475952 NWD2Q9ULI1 1742 aa16.47■□□□□ 0.23
NUDCD3-206ENST00000475952 TOPAZ1Q8N9V7 1692 aa16.46■□□□□ 0.23
NUDCD3-206ENST00000475952 FOXO3O43524 673 aa16.45■□□□□ 0.22
NUDCD3-206ENST00000475952 XPCQ01831 940 aaPredicted RBP16.45■□□□□ 0.22
NUDCD3-206ENST00000475952 TRPM3Q9HCF6 1732 aaPredicted RBP16.45■□□□□ 0.22
NUDCD3-206ENST00000475952 TRIM26Q12899 539 aaPredicted RBP16.44■□□□□ 0.22
NUDCD3-206ENST00000475952 UNC5CLQ8IV45 518 aa16.44■□□□□ 0.22
NUDCD3-206ENST00000475952 MINK1Q8N4C8 1332 aaPredicted RBP16.43■□□□□ 0.22
NUDCD3-206ENST00000475952 PHF8Q9UPP1 1060 aa16.42■□□□□ 0.22
NUDCD3-206ENST00000475952 ALS2Q96Q42 1657 aa16.42■□□□□ 0.22
NUDCD3-206ENST00000475952 HIRIP3Q9BW71 556 aaPredicted RBP16.41■□□□□ 0.22
NUDCD3-206ENST00000475952 TNS3Q68CZ2 1445 aa16.4■□□□□ 0.22
NUDCD3-206ENST00000475952 L3MBTL2Q969R5 705 aa16.4■□□□□ 0.22
NUDCD3-206ENST00000475952 SIN3AQ96ST3 1273 aa16.4■□□□□ 0.22
NUDCD3-206ENST00000475952 ATP7BP35670 1465 aa16.4■□□□□ 0.22
NUDCD3-206ENST00000475952 RGPD1P0DJD0 1748 aa16.39■□□□□ 0.21
NUDCD3-206ENST00000475952 WASLO00401 505 aaPredicted RBP16.39■□□□□ 0.21
NUDCD3-206ENST00000475952 SEPT12Q8IYM1 358 aa16.39■□□□□ 0.21
NUDCD3-206ENST00000475952 NRAPQ86VF7 1730 aa16.39■□□□□ 0.21
NUDCD3-206ENST00000475952 CRYBG1Q9Y4K1 1723 aa16.39■□□□□ 0.21
NUDCD3-206ENST00000475952 SF3B2Q13435 895 aaKnown RBP16.38■□□□□ 0.21
NUDCD3-206ENST00000475952 NEUROD1Q13562 356 aa16.38■□□□□ 0.21
NUDCD3-206ENST00000475952 SPATA31A3Q5VYP0 1347 aa16.38■□□□□ 0.21
NUDCD3-206ENST00000475952 PSME1Q06323 249 aa16.37■□□□□ 0.21
NUDCD3-206ENST00000475952 KRT28Q7Z3Y7 464 aa16.37■□□□□ 0.21
NUDCD3-206ENST00000475952 TNS1Q9HBL0 1735 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms