RNA–Protein interactions for RNA: ENST00000475889.1

PKD1-212, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 511 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-212ENST00000475889 C19orf44Q9H6X5 657 aa18.59■□□□□ 0.57
PKD1-212ENST00000475889 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.59■□□□□ 0.57
PKD1-212ENST00000475889 ARHGEF28Q8N1W1 1705 aaKnown RBP18.58■□□□□ 0.57
PKD1-212ENST00000475889 GPRASP1Q5JY77 1395 aa18.57■□□□□ 0.56
PKD1-212ENST00000475889 SAFB2Q14151 953 aaKnown RBP eCLIP18.57■□□□□ 0.56
PKD1-212ENST00000475889 TOM1O60784 492 aa18.56■□□□□ 0.56
PKD1-212ENST00000475889 POGKQ9P215 609 aa18.56■□□□□ 0.56
PKD1-212ENST00000475889 DCCP43146 1447 aa18.54■□□□□ 0.56
PKD1-212ENST00000475889 ATF3P18847 181 aa18.53■□□□□ 0.56
PKD1-212ENST00000475889 CARD11Q9BXL7 1154 aa18.53■□□□□ 0.56
PKD1-212ENST00000475889 PIP4K2BP78356 416 aa18.52■□□□□ 0.56
PKD1-212ENST00000475889 CADPS2Q86UW7 1296 aa18.52■□□□□ 0.56
PKD1-212ENST00000475889 CDC42BPGQ6DT37 1551 aa18.51■□□□□ 0.55
PKD1-212ENST00000475889 MINK1Q8N4C8 1332 aaPredicted RBP18.5■□□□□ 0.55
PKD1-212ENST00000475889 SLAIN2Q9P270 581 aa18.5■□□□□ 0.55
PKD1-212ENST00000475889 SCAF1Q9H7N4 1312 aaKnown RBP18.49■□□□□ 0.55
PKD1-212ENST00000475889 MST1RQ04912 1400 aa18.49■□□□□ 0.55
PKD1-212ENST00000475889 HIRIP3Q9BW71 556 aaPredicted RBP18.49■□□□□ 0.55
PKD1-212ENST00000475889 CENPJQ9HC77 1338 aaPredicted RBP18.49■□□□□ 0.55
PKD1-212ENST00000475889 ADGRB2O60241 1585 aa18.48■□□□□ 0.55
PKD1-212ENST00000475889 QRICH2Q9H0J4 1663 aa18.46■□□□□ 0.55
PKD1-212ENST00000475889 FMN2Q9NZ56 1722 aa18.46■□□□□ 0.55
PKD1-212ENST00000475889 C1orf167Q5SNV9 1468 aa18.46■□□□□ 0.54
PKD1-212ENST00000475889 EIF3AQ14152 1382 aaKnown RBP18.45■□□□□ 0.54
PKD1-212ENST00000475889 NUTM2FA1L443 756 aa18.45■□□□□ 0.54
PKD1-212ENST00000475889 ROBO1Q9Y6N7 1651 aa18.44■□□□□ 0.54
PKD1-212ENST00000475889 WASLO00401 505 aaPredicted RBP18.43■□□□□ 0.54
PKD1-212ENST00000475889 BRINP3Q76B58 766 aa18.42■□□□□ 0.54
PKD1-212ENST00000475889 USP47Q96K76 1375 aa18.42■□□□□ 0.54
PKD1-212ENST00000475889 ORAI2Q96SN7 254 aa18.41■□□□□ 0.54
PKD1-212ENST00000475889 USP32Q8NFA0 1604 aa18.41■□□□□ 0.54
PKD1-212ENST00000475889 ST20-MTHFSA0A0A6YYL1 179 aa18.4■□□□□ 0.54
PKD1-212ENST00000475889 TULP4Q9NRJ4 1543 aa18.39■□□□□ 0.54
PKD1-212ENST00000475889 CDK19Q9BWU1 502 aa18.39■□□□□ 0.53
PKD1-212ENST00000475889 PRR36Q9H6K5 1346 aa18.39■□□□□ 0.53
PKD1-212ENST00000475889 SBNO2Q9Y2G9 1366 aa18.38■□□□□ 0.53
PKD1-212ENST00000475889 HSPA1LP34931 641 aa18.37■□□□□ 0.53
PKD1-212ENST00000475889 ESCO1Q5FWF5 840 aa18.37■□□□□ 0.53
PKD1-212ENST00000475889 ANKARQ7Z5J8 1434 aa18.37■□□□□ 0.53
PKD1-212ENST00000475889 RGPD8O14715 1765 aaPredicted RBP18.37■□□□□ 0.53
PKD1-212ENST00000475889 TESK2Q96S53 571 aa18.36■□□□□ 0.53
PKD1-212ENST00000475889 ATP7BP35670 1465 aa18.35■□□□□ 0.53
PKD1-212ENST00000475889 DDX17Q92841 729 aaKnown RBP18.35■□□□□ 0.53
PKD1-212ENST00000475889 CABP2Q9NPB3 220 aa18.35■□□□□ 0.53
PKD1-212ENST00000475889 EVC2Q86UK5 1308 aa18.34■□□□□ 0.53
PKD1-212ENST00000475889 SRPK2P78362 688 aaKnown RBP18.34■□□□□ 0.53
PKD1-212ENST00000475889 NUDT16Q96DE0 195 aaKnown RBP18.34■□□□□ 0.53
PKD1-212ENST00000475889 AHDC1Q5TGY3 1603 aaPredicted RBP18.34■□□□□ 0.53
PKD1-212ENST00000475889 NHSL1Q5SYE7 1610 aa18.33■□□□□ 0.52
PKD1-212ENST00000475889 PHF8Q9UPP1 1060 aa18.32■□□□□ 0.52
PKD1-212ENST00000475889 PHLPP1O60346 1717 aa18.32■□□□□ 0.52
PKD1-212ENST00000475889 HSPA5P11021 654 aaKnown RBP18.31■□□□□ 0.52
PKD1-212ENST00000475889 EIF4G2P78344 907 aaKnown RBP eCLIP18.31■□□□□ 0.52
PKD1-212ENST00000475889 PMFBP1Q8TBY8 1022 aa18.31■□□□□ 0.52
PKD1-212ENST00000475889 KIF1AQ12756 1690 aa18.31■□□□□ 0.52
PKD1-212ENST00000475889 TOPAZ1Q8N9V7 1692 aa18.31■□□□□ 0.52
PKD1-212ENST00000475889 FOXO3O43524 673 aa18.3■□□□□ 0.52
PKD1-212ENST00000475889 COL16A1Q07092 1604 aaPredicted RBP18.3■□□□□ 0.52
PKD1-212ENST00000475889 CCDC61Q9Y6R9 512 aa18.29■□□□□ 0.52
PKD1-212ENST00000475889 ITSN1Q15811 1721 aa18.29■□□□□ 0.52
PKD1-212ENST00000475889 NPHP3Q7Z494 1330 aa18.27■□□□□ 0.52
PKD1-212ENST00000475889 XPCQ01831 940 aaPredicted RBP18.27■□□□□ 0.52
PKD1-212ENST00000475889 PXDNQ92626 1479 aa18.26■□□□□ 0.51
PKD1-212ENST00000475889 SOS2Q07890 1332 aaPredicted RBP18.26■□□□□ 0.51
PKD1-212ENST00000475889 PPIP5K1Q6PFW1 1433 aa18.26■□□□□ 0.51
PKD1-212ENST00000475889 PLEKHG3A1L390 1219 aa18.25■□□□□ 0.51
PKD1-212ENST00000475889 TMF1P82094 1093 aa18.25■□□□□ 0.51
PKD1-212ENST00000475889 CABP1Q9NZU7 370 aa18.25■□□□□ 0.51
PKD1-212ENST00000475889 ATAD2Q6PL18 1390 aa18.25■□□□□ 0.51
PKD1-212ENST00000475889 SLC24A1O60721 1099 aa18.24■□□□□ 0.51
PKD1-212ENST00000475889 ACEP12821 1306 aa18.23■□□□□ 0.51
PKD1-212ENST00000475889 KRT28Q7Z3Y7 464 aa18.23■□□□□ 0.51
PKD1-212ENST00000475889 NGDNQ8NEJ9 315 aaKnown RBP18.23■□□□□ 0.51
PKD1-212ENST00000475889 POLR3AO14802 1390 aaPredicted RBP18.22■□□□□ 0.51
PKD1-212ENST00000475889 PSME1Q06323 249 aa18.22■□□□□ 0.51
PKD1-212ENST00000475889 PUS7Q96PZ0 661 aaKnown RBP18.22■□□□□ 0.51
PKD1-212ENST00000475889 LRRC59Q96AG4 307 aaKnown RBP18.21■□□□□ 0.51
PKD1-212ENST00000475889 ZEB1P37275 1124 aaPredicted RBP18.2■□□□□ 0.5
PKD1-212ENST00000475889 JCADQ9P266 1359 aa18.19■□□□□ 0.5
PKD1-212ENST00000475889 TRPM3Q9HCF6 1732 aaPredicted RBP18.18■□□□□ 0.5
PKD1-212ENST00000475889 TMC1Q8TDI8 760 aa18.18■□□□□ 0.5
PKD1-212ENST00000475889 SLC12A5Q9H2X9 1139 aa18.18■□□□□ 0.5
PKD1-212ENST00000475889 PNPLA6Q8IY17 1366 aa18.17■□□□□ 0.5
PKD1-212ENST00000475889 C11orf95C9JLR9 678 aaPredicted RBP18.17■□□□□ 0.5
PKD1-212ENST00000475889 CDCA8Q53HL2 280 aa18.17■□□□□ 0.5
PKD1-212ENST00000475889 SHPRHQ149N8 1683 aa18.17■□□□□ 0.5
PKD1-212ENST00000475889 SPATA31A3Q5VYP0 1347 aa18.17■□□□□ 0.5
PKD1-212ENST00000475889 SBNO1A3KN83 1393 aa18.17■□□□□ 0.5
PKD1-212ENST00000475889 CD163L1Q9NR16 1453 aa18.16■□□□□ 0.5
PKD1-212ENST00000475889 CPSF1Q10570 1443 aaKnown RBP18.15■□□□□ 0.5
PKD1-212ENST00000475889 TNS3Q68CZ2 1445 aa18.15■□□□□ 0.5
PKD1-212ENST00000475889 USP6P35125 1406 aa18.15■□□□□ 0.5
PKD1-212ENST00000475889 AKAP12Q02952 1782 aa18.14■□□□□ 0.5
PKD1-212ENST00000475889 PAK3O75914 559 aaPredicted RBP18.13■□□□□ 0.49
PKD1-212ENST00000475889 POLR3GLQ9BT43 218 aa18.13■□□□□ 0.49
PKD1-212ENST00000475889 NINLQ9Y2I6 1382 aa18.13■□□□□ 0.49
PKD1-212ENST00000475889 MYOM1P52179 1685 aa18.12■□□□□ 0.49
PKD1-212ENST00000475889 ALS2Q96Q42 1657 aa18.12■□□□□ 0.49
PKD1-212ENST00000475889 LMOD2Q6P5Q4 547 aa18.12■□□□□ 0.49
PKD1-212ENST00000475889 ZNF692Q9BU19 519 aaPredicted RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms