RNA–Protein interactions for RNA: ENST00000475716.5

SNX5-208, Transcript of sorting nexin 5, humanhuman

TSL 3

Gene SNX5, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-208ENST00000475716 ROCK1Q13464 1354 aa15.35■□□□□ 0.05
SNX5-208ENST00000475716 MYOM2P54296 1465 aa15.34■□□□□ 0.05
SNX5-208ENST00000475716 BLMP54132 1417 aaPredicted RBP15.34■□□□□ 0.05
SNX5-208ENST00000475716 NUTM2FA1L443 756 aa15.33■□□□□ 0.04
SNX5-208ENST00000475716 NPHP3Q7Z494 1330 aa15.33■□□□□ 0.04
SNX5-208ENST00000475716 PSDA5PKW4 1024 aaPredicted RBP15.32■□□□□ 0.04
SNX5-208ENST00000475716 SEPT12Q8IYM1 358 aa15.32■□□□□ 0.04
SNX5-208ENST00000475716 VGFO15240 615 aaPredicted RBP15.31■□□□□ 0.04
SNX5-208ENST00000475716 RALGAPBQ86X10 1494 aa15.31■□□□□ 0.04
SNX5-208ENST00000475716 NEXMIFQ5QGS0 1516 aa15.31■□□□□ 0.04
SNX5-208ENST00000475716 COL22A1Q8NFW1 1626 aaPredicted RBP15.31■□□□□ 0.04
SNX5-208ENST00000475716 SF3B2Q13435 895 aaKnown RBP15.3■□□□□ 0.04
SNX5-208ENST00000475716 PXDNQ92626 1479 aa15.29■□□□□ 0.04
SNX5-208ENST00000475716 PLEKHG5O94827 1062 aa15.29■□□□□ 0.04
SNX5-208ENST00000475716 WAPLQ7Z5K2 1190 aa15.28■□□□□ 0.04
SNX5-208ENST00000475716 GLI3P10071 1580 aa15.28■□□□□ 0.04
SNX5-208ENST00000475716 HRCP23327 699 aa15.27■□□□□ 0.04
SNX5-208ENST00000475716 CABLES1Q8TDN4 633 aa15.27■□□□□ 0.04
SNX5-208ENST00000475716 SLIT2O94813 1529 aa15.27■□□□□ 0.03
SNX5-208ENST00000475716 ONECUT3O60422 494 aaPredicted RBP15.26■□□□□ 0.03
SNX5-208ENST00000475716 STK26Q9P289 416 aa15.26■□□□□ 0.03
SNX5-208ENST00000475716 SPHKAPQ2M3C7 1700 aa15.26■□□□□ 0.03
SNX5-208ENST00000475716 HFM1A2PYH4 1435 aa15.26■□□□□ 0.03
SNX5-208ENST00000475716 CLTCL1P53675 1640 aa15.25■□□□□ 0.03
SNX5-208ENST00000475716 SPATA31A3Q5VYP0 1347 aa15.25■□□□□ 0.03
SNX5-208ENST00000475716 KRT28Q7Z3Y7 464 aa15.25■□□□□ 0.03
SNX5-208ENST00000475716 KRT27Q7Z3Y8 459 aa15.25■□□□□ 0.03
SNX5-208ENST00000475716 CCDC9Q9Y3X0 531 aaKnown RBP15.25■□□□□ 0.03
SNX5-208ENST00000475716 VPS72Q15906 364 aa15.24■□□□□ 0.03
SNX5-208ENST00000475716 PPARGC1BQ86YN6 1023 aaKnown RBP15.23■□□□□ 0.03
SNX5-208ENST00000475716 LRPPRCP42704 1394 aaKnown RBP15.23■□□□□ 0.03
SNX5-208ENST00000475716 EN1Q05925 392 aaPredicted RBP15.22■□□□□ 0.03
SNX5-208ENST00000475716 BRWD3Q6RI45 1802 aa15.22■□□□□ 0.03
SNX5-208ENST00000475716 RPGRIP1LQ68CZ1 1315 aa15.21■□□□□ 0.03
SNX5-208ENST00000475716 MARF1Q9Y4F3 1742 aaKnown RBP15.21■□□□□ 0.03
SNX5-208ENST00000475716 NAIPQ13075 1403 aa15.21■□□□□ 0.03
SNX5-208ENST00000475716 TMEM132EQ6IEE7 984 aa15.21■□□□□ 0.03
SNX5-208ENST00000475716 PRAG1Q86YV5 1406 aa15.2■□□□□ 0.02
SNX5-208ENST00000475716 FAM83GA6ND36 823 aa15.2■□□□□ 0.02
SNX5-208ENST00000475716 BAG6P46379 1132 aa15.2■□□□□ 0.02
SNX5-208ENST00000475716 HAP1P54257 671 aaPredicted RBP15.2■□□□□ 0.02
SNX5-208ENST00000475716 R3HDM1Q15032 1099 aaKnown RBP15.2■□□□□ 0.02
SNX5-208ENST00000475716 FAM182BQ5T319 152 aa15.2■□□□□ 0.02
SNX5-208ENST00000475716 PLEKHH1Q9ULM0 1364 aa15.2■□□□□ 0.02
SNX5-208ENST00000475716 ADGRF5Q8IZF2 1346 aa15.19■□□□□ 0.02
SNX5-208ENST00000475716 LRP5O75197 1615 aa15.19■□□□□ 0.02
SNX5-208ENST00000475716 A0A0G2JS52 829 aa15.18■□□□□ 0.02
SNX5-208ENST00000475716 MYT1Q01538 1121 aa15.18■□□□□ 0.02
SNX5-208ENST00000475716 FAM98CQ17RN3 349 aaKnown RBP15.18■□□□□ 0.02
SNX5-208ENST00000475716 LMOD2Q6P5Q4 547 aa15.18■□□□□ 0.02
SNX5-208ENST00000475716 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.17■□□□□ 0.02
SNX5-208ENST00000475716 CDC42BPGQ6DT37 1551 aa15.16■□□□□ 0.02
SNX5-208ENST00000475716 KIF1BO60333 1816 aa15.15■□□□□ 0.02
SNX5-208ENST00000475716 PSME1Q06323 249 aa15.15■□□□□ 0.02
SNX5-208ENST00000475716 RGL3Q3MIN7 710 aa15.15■□□□□ 0.02
SNX5-208ENST00000475716 PHF8Q9UPP1 1060 aa15.15■□□□□ 0.02
SNX5-208ENST00000475716 EZH2Q15910 746 aaKnown RBP15.13■□□□□ 0.01
SNX5-208ENST00000475716 BTG4Q9NY30 223 aa15.13■□□□□ 0.01
SNX5-208ENST00000475716 USP32Q8NFA0 1604 aa15.13■□□□□ 0.01
SNX5-208ENST00000475716 ABCC11Q96J66 1382 aa15.12■□□□□ 0.01
SNX5-208ENST00000475716 CCDC144AA2RUR9 1427 aa15.12■□□□□ 0.01
SNX5-208ENST00000475716 SLC4A1APQ9BWU0 796 aaKnown RBP15.11■□□□□ 0.01
SNX5-208ENST00000475716 TNS3Q68CZ2 1445 aa15.1■□□□□ 0.01
SNX5-208ENST00000475716 YY1P25490 414 aa15.1■□□□□ 0.01
SNX5-208ENST00000475716 PMFBP1Q8TBY8 1022 aa15.1■□□□□ 0.01
SNX5-208ENST00000475716 TECPR2O15040 1411 aa15.09■□□□□ 0.01
SNX5-208ENST00000475716 SAFB2Q14151 953 aaKnown RBP eCLIP15.08■□□□□ 0
SNX5-208ENST00000475716 CAMKK2Q96RR4 588 aa15.08■□□□□ 0
SNX5-208ENST00000475716 SBNO1A3KN83 1393 aa15.08■□□□□ 0
SNX5-208ENST00000475716 PPLO60437 1756 aa15.07■□□□□ 0
SNX5-208ENST00000475716 TRIM37O94972 964 aa15.07■□□□□ 0
SNX5-208ENST00000475716 SIRT1Q96EB6 747 aa15.06■□□□□ 0
SNX5-208ENST00000475716 SPATA31A5Q5VU36 1347 aa15.06■□□□□ 0
SNX5-208ENST00000475716 SPATA31A7Q8IWB4 1347 aa15.06■□□□□ 0
SNX5-208ENST00000475716 RRBP1Q9P2E9 1410 aaKnown RBP15.06■□□□□ 0
SNX5-208ENST00000475716 YTHDC2Q9H6S0 1430 aaKnown RBP15.05■□□□□ -0
SNX5-208ENST00000475716 PLCH1Q4KWH8 1693 aa15.05■□□□□ -0
SNX5-208ENST00000475716 FMN2Q9NZ56 1722 aa15.05■□□□□ -0
SNX5-208ENST00000475716 ARHGEF10O15013 1369 aa15.04■□□□□ -0
SNX5-208ENST00000475716 APBA3O96018 575 aa15.04■□□□□ -0
SNX5-208ENST00000475716 NWD2Q9ULI1 1742 aa15.03■□□□□ -0
SNX5-208ENST00000475716 PRAM1Q96QH2 718 aa15.03■□□□□ -0
SNX5-208ENST00000475716 RGPD8O14715 1765 aaPredicted RBP15.03■□□□□ -0
SNX5-208ENST00000475716 KIF1AQ12756 1690 aa15.03■□□□□ -0
SNX5-208ENST00000475716 NRXN1Q9ULB1 1477 aa15.02■□□□□ -0
SNX5-208ENST00000475716 CFAP70Q5T0N1 1121 aa15.02■□□□□ -0
SNX5-208ENST00000475716 C14orf93Q9H972 538 aaKnown RBP15.02■□□□□ -0
SNX5-208ENST00000475716 DISP2A7MBM2 1401 aa15.01□□□□□ -0.01
SNX5-208ENST00000475716 SPATA31E1Q6ZUB1 1445 aa15□□□□□ -0.01
SNX5-208ENST00000475716 ANKRD30BQ9BXX2 1392 aa15□□□□□ -0.01
SNX5-208ENST00000475716 FAM196AQ6ZSG2 479 aa15□□□□□ -0.01
SNX5-208ENST00000475716 PIK3C2GO75747 1445 aa14.99□□□□□ -0.01
SNX5-208ENST00000475716 SPATA31A1Q5TZJ5 1347 aa14.98□□□□□ -0.01
SNX5-208ENST00000475716 NRAPQ86VF7 1730 aa14.98□□□□□ -0.01
SNX5-208ENST00000475716 CHRNA2Q15822 529 aa14.98□□□□□ -0.01
SNX5-208ENST00000475716 HIRIP3Q9BW71 556 aaPredicted RBP14.98□□□□□ -0.01
SNX5-208ENST00000475716 POGKQ9P215 609 aa14.98□□□□□ -0.01
SNX5-208ENST00000475716 RGPD1P0DJD0 1748 aa14.97□□□□□ -0.01
SNX5-208ENST00000475716 ABCA3Q99758 1704 aa14.97□□□□□ -0.01
SNX5-208ENST00000475716 PAK3O75914 559 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms