RNA–Protein interactions for RNA: ENST00000475427.2

PDE6C-202, Transcript of phosphodiesterase 6C, humanhuman

TSL 2

Gene PDE6C, Length 476 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-202ENST00000475427 MS4A1P11836 297 aa10.11□□□□□ -0.79
PDE6C-202ENST00000475427 LAPTM4AQ15012 233 aa10.11□□□□□ -0.79
PDE6C-202ENST00000475427 Q6ZNB5 142 aa10.11□□□□□ -0.79
PDE6C-202ENST00000475427 FCF1Q9Y324 198 aaKnown RBP10.11□□□□□ -0.79
PDE6C-202ENST00000475427 FDX1P10109 184 aa10.09□□□□□ -0.79
PDE6C-202ENST00000475427 ZNF598Q86UK7 904 aaKnown RBP10.09□□□□□ -0.79
PDE6C-202ENST00000475427 SYMPKQ92797 1274 aaKnown RBP10.09□□□□□ -0.79
PDE6C-202ENST00000475427 MOXD2PA6NHM9 499 aa10.08□□□□□ -0.8
PDE6C-202ENST00000475427 NDUFV2P19404 249 aa10.08□□□□□ -0.8
PDE6C-202ENST00000475427 MMP16P51512 607 aa10.08□□□□□ -0.8
PDE6C-202ENST00000475427 PCDHGC3Q9UN70 934 aa10.08□□□□□ -0.8
PDE6C-202ENST00000475427 PDZRN3Q9UPQ7 1066 aa10.07□□□□□ -0.8
PDE6C-202ENST00000475427 NRG2O14511 850 aaPredicted RBP10.06□□□□□ -0.8
PDE6C-202ENST00000475427 ZNF697Q5TEC3 545 aa10.06□□□□□ -0.8
PDE6C-202ENST00000475427 TBC1D2Q9BYX2 928 aa10.06□□□□□ -0.8
PDE6C-202ENST00000475427 DXOO77932 396 aaKnown RBP10.05□□□□□ -0.8
PDE6C-202ENST00000475427 RPIAP49247 311 aa10.05□□□□□ -0.8
PDE6C-202ENST00000475427 DIXDC1Q155Q3 683 aa10.05□□□□□ -0.8
PDE6C-202ENST00000475427 C6orf229H3BNL8 230 aa10.04□□□□□ -0.8
PDE6C-202ENST00000475427 TRIM67Q6ZTA4 783 aa10.04□□□□□ -0.8
PDE6C-202ENST00000475427 RETREG3Q86VR2 466 aa10.04□□□□□ -0.8
PDE6C-202ENST00000475427 CD2BP2O95400 341 aaKnown RBP10.02□□□□□ -0.81
PDE6C-202ENST00000475427 ZBTB24O43167 697 aaPredicted RBP10.01□□□□□ -0.81
PDE6C-202ENST00000475427 JUNDP17535 347 aa10.01□□□□□ -0.81
PDE6C-202ENST00000475427 GJA5P36382 358 aa10.01□□□□□ -0.81
PDE6C-202ENST00000475427 RSBN1LQ6PCB5 846 aaPredicted RBP10.01□□□□□ -0.81
PDE6C-202ENST00000475427 GDF9O60383 454 aa10□□□□□ -0.81
PDE6C-202ENST00000475427 PRR20EP86478 221 aa10□□□□□ -0.81
PDE6C-202ENST00000475427 PRR20CP86479 221 aa10□□□□□ -0.81
PDE6C-202ENST00000475427 PRR20DP86480 221 aa10□□□□□ -0.81
PDE6C-202ENST00000475427 PRR20BP86481 221 aa10□□□□□ -0.81
PDE6C-202ENST00000475427 PRR20AP86496 221 aa10□□□□□ -0.81
PDE6C-202ENST00000475427 CCDC24Q8N4L8 307 aa10□□□□□ -0.81
PDE6C-202ENST00000475427 SPTLC1O15269 473 aa9.99□□□□□ -0.81
PDE6C-202ENST00000475427 TNFRSF10AO00220 468 aa9.98□□□□□ -0.81
PDE6C-202ENST00000475427 MTMR2Q13614 643 aa9.98□□□□□ -0.81
PDE6C-202ENST00000475427 RIC3Q7Z5B4 369 aa9.98□□□□□ -0.81
PDE6C-202ENST00000475427 PCDHB15Q9Y5E8 787 aa9.98□□□□□ -0.81
PDE6C-202ENST00000475427 SPDYE5A6NIY4 337 aa9.97□□□□□ -0.81
PDE6C-202ENST00000475427 FOXC1Q12948 553 aa9.97□□□□□ -0.81
PDE6C-202ENST00000475427 PKD2L1Q9P0L9 805 aa9.97□□□□□ -0.81
PDE6C-202ENST00000475427 MYSM1Q5VVJ2 828 aa9.96□□□□□ -0.82
PDE6C-202ENST00000475427 TRAF7Q6Q0C0 670 aa9.96□□□□□ -0.82
PDE6C-202ENST00000475427 PRR7Q8TB68 274 aa9.96□□□□□ -0.82
PDE6C-202ENST00000475427 LCE2BO14633 110 aa9.95□□□□□ -0.82
PDE6C-202ENST00000475427 TRIM32Q13049 653 aa9.95□□□□□ -0.82
PDE6C-202ENST00000475427 NUDT12Q9BQG2 462 aa9.95□□□□□ -0.82
PDE6C-202ENST00000475427 GPBP1L1Q9HC44 474 aaPredicted RBP9.94□□□□□ -0.82
PDE6C-202ENST00000475427 HRCP23327 699 aa9.93□□□□□ -0.82
PDE6C-202ENST00000475427 KDM4CQ9H3R0 1056 aa9.93□□□□□ -0.82
PDE6C-202ENST00000475427 ZBTB3Q9H5J0 574 aa9.93□□□□□ -0.82
PDE6C-202ENST00000475427 LIMD1Q9UGP4 676 aa9.93□□□□□ -0.82
PDE6C-202ENST00000475427 CSPP1Q1MSJ5 1256 aa9.92□□□□□ -0.82
PDE6C-202ENST00000475427 PRPF38BQ5VTL8 546 aaKnown RBP9.92□□□□□ -0.82
PDE6C-202ENST00000475427 DESI1Q6ICB0 168 aa9.92□□□□□ -0.82
PDE6C-202ENST00000475427 CCNYL3P0C7X3 344 aa9.91□□□□□ -0.82
PDE6C-202ENST00000475427 PTPRNQ16849 979 aa9.91□□□□□ -0.82
PDE6C-202ENST00000475427 TUSC1Q2TAM9 212 aa9.91□□□□□ -0.82
PDE6C-202ENST00000475427 PKDCCQ504Y2 493 aa9.91□□□□□ -0.82
PDE6C-202ENST00000475427 PTCRAQ6ISU1 281 aaPredicted RBP9.91□□□□□ -0.82
PDE6C-202ENST00000475427 CABLES1Q8TDN4 633 aa9.91□□□□□ -0.82
PDE6C-202ENST00000475427 RSPH6AQ9H0K4 717 aa9.91□□□□□ -0.82
PDE6C-202ENST00000475427 CFAP99D6REC4 459 aa9.9□□□□□ -0.82
PDE6C-202ENST00000475427 DGAT1O75907 488 aa9.9□□□□□ -0.82
PDE6C-202ENST00000475427 FAM187AA6NFU0 413 aa9.89□□□□□ -0.83
PDE6C-202ENST00000475427 WNT7AO00755 349 aa9.89□□□□□ -0.83
PDE6C-202ENST00000475427 EVA1BQ9NVM1 165 aa9.89□□□□□ -0.83
PDE6C-202ENST00000475427 CLK2P49760 499 aaKnown RBP9.88□□□□□ -0.83
PDE6C-202ENST00000475427 QPCTQ16769 361 aa9.88□□□□□ -0.83
PDE6C-202ENST00000475427 CYP4X1Q8N118 509 aa9.88□□□□□ -0.83
PDE6C-202ENST00000475427 FAM117AQ9C073 453 aa9.88□□□□□ -0.83
PDE6C-202ENST00000475427 POLR3EQ9NVU0 708 aa9.88□□□□□ -0.83
PDE6C-202ENST00000475427 TOR4AQ9NXH8 423 aa9.88□□□□□ -0.83
PDE6C-202ENST00000475427 NUTM2BA6NNL0 878 aaPredicted RBP9.87□□□□□ -0.83
PDE6C-202ENST00000475427 NUTM2EB1AL46 878 aaPredicted RBP9.87□□□□□ -0.83
PDE6C-202ENST00000475427 LILRB3O75022 631 aa9.87□□□□□ -0.83
PDE6C-202ENST00000475427 WNT7BP56706 349 aa9.87□□□□□ -0.83
PDE6C-202ENST00000475427 SKOR1P84550 965 aa9.87□□□□□ -0.83
PDE6C-202ENST00000475427 KCNH2Q12809 1159 aa9.87□□□□□ -0.83
PDE6C-202ENST00000475427 NUTM2DQ5VT03 806 aaPredicted RBP9.87□□□□□ -0.83
PDE6C-202ENST00000475427 LYPD8Q6UX82 237 aa9.87□□□□□ -0.83
PDE6C-202ENST00000475427 NUTM2AQ8IVF1 878 aaPredicted RBP9.87□□□□□ -0.83
PDE6C-202ENST00000475427 DDRGK1Q96HY6 314 aa9.86□□□□□ -0.83
PDE6C-202ENST00000475427 MRGPRX2Q96LB1 330 aa9.86□□□□□ -0.83
PDE6C-202ENST00000475427 MYT1Q01538 1121 aa9.85□□□□□ -0.83
PDE6C-202ENST00000475427 RC3H1Q5TC82 1133 aaKnown RBP9.85□□□□□ -0.83
PDE6C-202ENST00000475427 UNC93B1Q9H1C4 597 aa9.85□□□□□ -0.83
PDE6C-202ENST00000475427 TTC24A2A3L6 582 aaPredicted RBP9.84□□□□□ -0.83
PDE6C-202ENST00000475427 RTL5Q5HYW3 569 aaPredicted RBP9.84□□□□□ -0.83
PDE6C-202ENST00000475427 SKIV2LQ15477 1246 aaKnown RBP9.83□□□□□ -0.84
PDE6C-202ENST00000475427 SNIP1Q8TAD8 396 aaKnown RBP9.83□□□□□ -0.84
PDE6C-202ENST00000475427 PLEKHG3A1L390 1219 aa9.82□□□□□ -0.84
PDE6C-202ENST00000475427 CTHP32929 405 aa9.82□□□□□ -0.84
PDE6C-202ENST00000475427 SH3D19Q5HYK7 790 aa9.82□□□□□ -0.84
PDE6C-202ENST00000475427 TSC1Q92574 1164 aa9.82□□□□□ -0.84
PDE6C-202ENST00000475427 SH3BP2P78314 561 aa9.81□□□□□ -0.84
PDE6C-202ENST00000475427 BAP1Q92560 729 aa9.81□□□□□ -0.84
PDE6C-202ENST00000475427 PER1O15534 1290 aaPredicted RBP9.8□□□□□ -0.84
PDE6C-202ENST00000475427 F12P00748 615 aaPredicted RBP9.8□□□□□ -0.84
PDE6C-202ENST00000475427 TPRNQ4KMQ1 711 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms