RNA–Protein interactions for RNA: ENST00000475422.5

ITSN1-227, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 798 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-227ENST00000475422 IFT172Q9UG01 1749 aa23.42■■□□□ 1.34
ITSN1-227ENST00000475422 ESCO1Q5FWF5 840 aa23.42■■□□□ 1.34
ITSN1-227ENST00000475422 NGLY1Q96IV0 654 aa23.41■■□□□ 1.34
ITSN1-227ENST00000475422 CDC42BPGQ6DT37 1551 aa23.4■■□□□ 1.34
ITSN1-227ENST00000475422 TMEM132EQ6IEE7 984 aa23.4■■□□□ 1.34
ITSN1-227ENST00000475422 WAPLQ7Z5K2 1190 aa23.4■■□□□ 1.34
ITSN1-227ENST00000475422 QTRT2Q9H974 415 aaKnown RBP23.4■■□□□ 1.34
ITSN1-227ENST00000475422 LRPPRCP42704 1394 aaKnown RBP23.4■■□□□ 1.34
ITSN1-227ENST00000475422 NPHP3Q7Z494 1330 aa23.38■■□□□ 1.33
ITSN1-227ENST00000475422 CDK12Q9NYV4 1490 aaPredicted RBP23.38■■□□□ 1.33
ITSN1-227ENST00000475422 UPF1Q92900 1129 aaKnown RBP eCLIP23.38■■□□□ 1.33
ITSN1-227ENST00000475422 NUTM2FA1L443 756 aa23.37■■□□□ 1.33
ITSN1-227ENST00000475422 TECPR2O15040 1411 aa23.36■■□□□ 1.33
ITSN1-227ENST00000475422 PIK3C2GO75747 1445 aa23.36■■□□□ 1.33
ITSN1-227ENST00000475422 RBM6P78332 1123 aaKnown RBP23.36■■□□□ 1.33
ITSN1-227ENST00000475422 ABCC11Q96J66 1382 aa23.36■■□□□ 1.33
ITSN1-227ENST00000475422 FOXO3O43524 673 aa23.34■■□□□ 1.33
ITSN1-227ENST00000475422 KNDC1Q76NI1 1749 aa23.33■■□□□ 1.33
ITSN1-227ENST00000475422 XPCQ01831 940 aaPredicted RBP23.33■■□□□ 1.33
ITSN1-227ENST00000475422 YTHDC2Q9H6S0 1430 aaKnown RBP23.33■■□□□ 1.32
ITSN1-227ENST00000475422 PLEKHH1Q9ULM0 1364 aa23.32■■□□□ 1.32
ITSN1-227ENST00000475422 USP21Q9UK80 565 aa23.32■■□□□ 1.32
ITSN1-227ENST00000475422 COL22A1Q8NFW1 1626 aaPredicted RBP23.3■■□□□ 1.32
ITSN1-227ENST00000475422 RGS12O14924 1447 aa23.3■■□□□ 1.32
ITSN1-227ENST00000475422 PXDNQ92626 1479 aa23.3■■□□□ 1.32
ITSN1-227ENST00000475422 C14orf93Q9H972 538 aaKnown RBP23.29■■□□□ 1.32
ITSN1-227ENST00000475422 RAB3GAP2Q9H2M9 1393 aa23.28■■□□□ 1.32
ITSN1-227ENST00000475422 DHX57Q6P158 1386 aaKnown RBP23.27■■□□□ 1.32
ITSN1-227ENST00000475422 CFAP70Q5T0N1 1121 aa23.27■■□□□ 1.32
ITSN1-227ENST00000475422 TRPC5Q9UL62 973 aaPredicted RBP23.27■■□□□ 1.32
ITSN1-227ENST00000475422 FMN2Q9NZ56 1722 aa23.27■■□□□ 1.32
ITSN1-227ENST00000475422 FNBP4Q8N3X1 1017 aaPredicted RBP23.26■■□□□ 1.31
ITSN1-227ENST00000475422 SIRT1Q96EB6 747 aa23.26■■□□□ 1.31
ITSN1-227ENST00000475422 MYOM2P54296 1465 aa23.25■■□□□ 1.31
ITSN1-227ENST00000475422 NRXN1Q9ULB1 1477 aa23.24■■□□□ 1.31
ITSN1-227ENST00000475422 KIF1AQ12756 1690 aa23.23■■□□□ 1.31
ITSN1-227ENST00000475422 SAFB2Q14151 953 aaKnown RBP eCLIP23.22■■□□□ 1.31
ITSN1-227ENST00000475422 PRAM1Q96QH2 718 aa23.21■■□□□ 1.31
ITSN1-227ENST00000475422 MARF1Q9Y4F3 1742 aaKnown RBP23.2■■□□□ 1.3
ITSN1-227ENST00000475422 KRT28Q7Z3Y7 464 aa23.2■■□□□ 1.3
ITSN1-227ENST00000475422 POGKQ9P215 609 aa23.2■■□□□ 1.3
ITSN1-227ENST00000475422 ATRNO75882 1429 aa23.19■■□□□ 1.3
ITSN1-227ENST00000475422 SPATA31A3Q5VYP0 1347 aa23.19■■□□□ 1.3
ITSN1-227ENST00000475422 PHF8Q9UPP1 1060 aa23.19■■□□□ 1.3
ITSN1-227ENST00000475422 RGPD8O14715 1765 aaPredicted RBP23.17■■□□□ 1.3
ITSN1-227ENST00000475422 ATAD2Q6PL18 1390 aa23.17■■□□□ 1.3
ITSN1-227ENST00000475422 HAP1P54257 671 aaPredicted RBP23.17■■□□□ 1.3
ITSN1-227ENST00000475422 PSME1Q06323 249 aa23.16■■□□□ 1.3
ITSN1-227ENST00000475422 BCL9LQ86UU0 1499 aa23.16■■□□□ 1.3
ITSN1-227ENST00000475422 KDM2AQ9Y2K7 1162 aa23.15■■□□□ 1.3
ITSN1-227ENST00000475422 DLC1Q96QB1 1528 aa23.13■■□□□ 1.29
ITSN1-227ENST00000475422 PLEKHG5O94827 1062 aa23.13■■□□□ 1.29
ITSN1-227ENST00000475422 LMOD2Q6P5Q4 547 aa23.13■■□□□ 1.29
ITSN1-227ENST00000475422 DCAF11Q8TEB1 546 aa23.13■■□□□ 1.29
ITSN1-227ENST00000475422 TRAK1Q9UPV9 953 aa23.13■■□□□ 1.29
ITSN1-227ENST00000475422 TNS3Q68CZ2 1445 aa23.12■■□□□ 1.29
ITSN1-227ENST00000475422 GJD4Q96KN9 370 aaPredicted RBP23.12■■□□□ 1.29
ITSN1-227ENST00000475422 UNC5CLQ8IV45 518 aa23.1■■□□□ 1.29
ITSN1-227ENST00000475422 USP32Q8NFA0 1604 aa23.09■■□□□ 1.29
ITSN1-227ENST00000475422 PMFBP1Q8TBY8 1022 aa23.09■■□□□ 1.29
ITSN1-227ENST00000475422 HIRIP3Q9BW71 556 aaPredicted RBP23.09■■□□□ 1.29
ITSN1-227ENST00000475422 ADGRB1O14514 1584 aa23.09■■□□□ 1.29
ITSN1-227ENST00000475422 ANKARQ7Z5J8 1434 aa23.08■■□□□ 1.29
ITSN1-227ENST00000475422 CABLES1Q8TDN4 633 aa23.08■■□□□ 1.29
ITSN1-227ENST00000475422 SBNO1A3KN83 1393 aa23.08■■□□□ 1.29
ITSN1-227ENST00000475422 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.08■■□□□ 1.28
ITSN1-227ENST00000475422 MINK1Q8N4C8 1332 aaPredicted RBP23.08■■□□□ 1.28
ITSN1-227ENST00000475422 STAC3Q96MF2 364 aa23.07■■□□□ 1.28
ITSN1-227ENST00000475422 SLIT2O94813 1529 aa23.07■■□□□ 1.28
ITSN1-227ENST00000475422 ADGRB2O60241 1585 aa23.06■■□□□ 1.28
ITSN1-227ENST00000475422 ARHGEF10O15013 1369 aa23.06■■□□□ 1.28
ITSN1-227ENST00000475422 HRCP23327 699 aa23.06■■□□□ 1.28
ITSN1-227ENST00000475422 EIF3AQ14152 1382 aaKnown RBP23.05■■□□□ 1.28
ITSN1-227ENST00000475422 RALGAPBQ86X10 1494 aa23.03■■□□□ 1.28
ITSN1-227ENST00000475422 GPRASP1Q5JY77 1395 aa23.02■■□□□ 1.28
ITSN1-227ENST00000475422 CCDC9Q9Y3X0 531 aaKnown RBP23.02■■□□□ 1.28
ITSN1-227ENST00000475422 WASLO00401 505 aaPredicted RBP23.01■■□□□ 1.27
ITSN1-227ENST00000475422 GLI3P10071 1580 aa23.01■■□□□ 1.27
ITSN1-227ENST00000475422 CCDC125Q86Z20 511 aa23■■□□□ 1.27
ITSN1-227ENST00000475422 ABCA3Q99758 1704 aa22.99■■□□□ 1.27
ITSN1-227ENST00000475422 TULP4Q9NRJ4 1543 aa22.99■■□□□ 1.27
ITSN1-227ENST00000475422 PLCH1Q4KWH8 1693 aa22.99■■□□□ 1.27
ITSN1-227ENST00000475422 VPS72Q15906 364 aa22.98■■□□□ 1.27
ITSN1-227ENST00000475422 NGDNQ8NEJ9 315 aaKnown RBP22.98■■□□□ 1.27
ITSN1-227ENST00000475422 PRR36Q9H6K5 1346 aa22.98■■□□□ 1.27
ITSN1-227ENST00000475422 NWD2Q9ULI1 1742 aa22.97■■□□□ 1.27
ITSN1-227ENST00000475422 FAM83GA6ND36 823 aa22.95■■□□□ 1.26
ITSN1-227ENST00000475422 PAK3O75914 559 aaPredicted RBP22.95■■□□□ 1.26
ITSN1-227ENST00000475422 TRPM3Q9HCF6 1732 aaPredicted RBP22.95■■□□□ 1.26
ITSN1-227ENST00000475422 ARHGEF28Q8N1W1 1705 aaKnown RBP22.94■■□□□ 1.26
ITSN1-227ENST00000475422 SEPT12Q8IYM1 358 aa22.94■■□□□ 1.26
ITSN1-227ENST00000475422 ZRANB1Q9UGI0 708 aa22.94■■□□□ 1.26
ITSN1-227ENST00000475422 EP400Q96L91 3159 aa22.94■■□□□ 1.26
ITSN1-227ENST00000475422 BRWD3Q6RI45 1802 aa22.92■■□□□ 1.26
ITSN1-227ENST00000475422 A0A0G2JS52 829 aa22.92■■□□□ 1.26
ITSN1-227ENST00000475422 MYT1Q01538 1121 aa22.92■■□□□ 1.26
ITSN1-227ENST00000475422 ALS2Q96Q42 1657 aa22.92■■□□□ 1.26
ITSN1-227ENST00000475422 NUDT16Q96DE0 195 aaKnown RBP22.91■■□□□ 1.26
ITSN1-227ENST00000475422 BTG4Q9NY30 223 aa22.91■■□□□ 1.26
ITSN1-227ENST00000475422 ITSN1Q15811 1721 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms