RNA–Protein interactions for RNA: ENST00000475403.2

LSAMP-204, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-204ENST00000475403 PSDA5PKW4 1024 aaPredicted RBP10.43□□□□□ -0.74
LSAMP-204ENST00000475403 ORAI2Q96SN7 254 aa10.43□□□□□ -0.74
LSAMP-204ENST00000475403 MYOM2P54296 1465 aa10.42□□□□□ -0.74
LSAMP-204ENST00000475403 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.42□□□□□ -0.74
LSAMP-204ENST00000475403 NPHP3Q7Z494 1330 aa10.42□□□□□ -0.74
LSAMP-204ENST00000475403 RALGAPBQ86X10 1494 aa10.42□□□□□ -0.74
LSAMP-204ENST00000475403 A0A0G2JS52 829 aa10.41□□□□□ -0.74
LSAMP-204ENST00000475403 SPHKAPQ2M3C7 1700 aa10.41□□□□□ -0.74
LSAMP-204ENST00000475403 BAG6P46379 1132 aa10.4□□□□□ -0.74
LSAMP-204ENST00000475403 HAP1P54257 671 aaPredicted RBP10.4□□□□□ -0.74
LSAMP-204ENST00000475403 UNC5CLQ8IV45 518 aa10.4□□□□□ -0.74
LSAMP-204ENST00000475403 CCDC9Q9Y3X0 531 aaKnown RBP10.4□□□□□ -0.74
LSAMP-204ENST00000475403 BRWD3Q6RI45 1802 aa10.4□□□□□ -0.75
LSAMP-204ENST00000475403 ESCO1Q5FWF5 840 aa10.39□□□□□ -0.75
LSAMP-204ENST00000475403 GLI3P10071 1580 aa10.39□□□□□ -0.75
LSAMP-204ENST00000475403 LRPPRCP42704 1394 aaKnown RBP10.39□□□□□ -0.75
LSAMP-204ENST00000475403 YY1P25490 414 aa10.38□□□□□ -0.75
LSAMP-204ENST00000475403 XPCQ01831 940 aaPredicted RBP10.38□□□□□ -0.75
LSAMP-204ENST00000475403 SEPT12Q8IYM1 358 aa10.38□□□□□ -0.75
LSAMP-204ENST00000475403 NUP155O75694 1391 aa10.38□□□□□ -0.75
LSAMP-204ENST00000475403 KRT27Q7Z3Y8 459 aa10.37□□□□□ -0.75
LSAMP-204ENST00000475403 PXDNQ92626 1479 aa10.36□□□□□ -0.75
LSAMP-204ENST00000475403 SLIT2O94813 1529 aa10.36□□□□□ -0.75
LSAMP-204ENST00000475403 ROBO2Q9HCK4 1378 aa10.36□□□□□ -0.75
LSAMP-204ENST00000475403 HFM1A2PYH4 1435 aa10.35□□□□□ -0.75
LSAMP-204ENST00000475403 NEXMIFQ5QGS0 1516 aa10.35□□□□□ -0.75
LSAMP-204ENST00000475403 FOXO3O43524 673 aa10.35□□□□□ -0.75
LSAMP-204ENST00000475403 USP32Q8NFA0 1604 aa10.35□□□□□ -0.75
LSAMP-204ENST00000475403 PLEKHG5O94827 1062 aa10.34□□□□□ -0.75
LSAMP-204ENST00000475403 R3HDM1Q15032 1099 aaKnown RBP10.34□□□□□ -0.75
LSAMP-204ENST00000475403 CDC42BPGQ6DT37 1551 aa10.34□□□□□ -0.75
LSAMP-204ENST00000475403 DCAF8L1A6NGE4 600 aa10.33□□□□□ -0.76
LSAMP-204ENST00000475403 KIF1BO60333 1816 aa10.33□□□□□ -0.76
LSAMP-204ENST00000475403 PLCH1Q4KWH8 1693 aa10.32□□□□□ -0.76
LSAMP-204ENST00000475403 NUTM2FA1L443 756 aa10.32□□□□□ -0.76
LSAMP-204ENST00000475403 EN1Q05925 392 aaPredicted RBP10.32□□□□□ -0.76
LSAMP-204ENST00000475403 VPS72Q15906 364 aa10.32□□□□□ -0.76
LSAMP-204ENST00000475403 RGPD1P0DJD0 1748 aa10.32□□□□□ -0.76
LSAMP-204ENST00000475403 CCDC144AA2RUR9 1427 aa10.32□□□□□ -0.76
LSAMP-204ENST00000475403 NWD2Q9ULI1 1742 aa10.31□□□□□ -0.76
LSAMP-204ENST00000475403 VGFO15240 615 aaPredicted RBP10.31□□□□□ -0.76
LSAMP-204ENST00000475403 CLTCL1P53675 1640 aa10.31□□□□□ -0.76
LSAMP-204ENST00000475403 ROCK1Q13464 1354 aa10.3□□□□□ -0.76
LSAMP-204ENST00000475403 KIF1AQ12756 1690 aa10.3□□□□□ -0.76
LSAMP-204ENST00000475403 SPATA31A3Q5VYP0 1347 aa10.3□□□□□ -0.76
LSAMP-204ENST00000475403 LOC105371045A0A1W2PR82 267 aa10.29□□□□□ -0.76
LSAMP-204ENST00000475403 LMOD2Q6P5Q4 547 aa10.29□□□□□ -0.76
LSAMP-204ENST00000475403 PPP1R1BQ9UD71 204 aaPredicted RBP10.29□□□□□ -0.76
LSAMP-204ENST00000475403 NAIPQ13075 1403 aa10.29□□□□□ -0.76
LSAMP-204ENST00000475403 PRAG1Q86YV5 1406 aa10.29□□□□□ -0.76
LSAMP-204ENST00000475403 ADGRB2O60241 1585 aa10.29□□□□□ -0.76
LSAMP-204ENST00000475403 TNS3Q68CZ2 1445 aa10.28□□□□□ -0.76
LSAMP-204ENST00000475403 FAM98CQ17RN3 349 aaKnown RBP10.28□□□□□ -0.76
LSAMP-204ENST00000475403 ONECUT3O60422 494 aaPredicted RBP10.27□□□□□ -0.77
LSAMP-204ENST00000475403 ITGAEP38570 1179 aa10.27□□□□□ -0.77
LSAMP-204ENST00000475403 PSME1Q06323 249 aa10.27□□□□□ -0.77
LSAMP-204ENST00000475403 KRT28Q7Z3Y7 464 aa10.27□□□□□ -0.77
LSAMP-204ENST00000475403 CABLES1Q8TDN4 633 aa10.26□□□□□ -0.77
LSAMP-204ENST00000475403 EZH2Q15910 746 aaKnown RBP10.25□□□□□ -0.77
LSAMP-204ENST00000475403 FAM182BQ5T319 152 aa10.25□□□□□ -0.77
LSAMP-204ENST00000475403 STK26Q9P289 416 aa10.25□□□□□ -0.77
LSAMP-204ENST00000475403 ARHGEF10O15013 1369 aa10.25□□□□□ -0.77
LSAMP-204ENST00000475403 DISP2A7MBM2 1401 aa10.24□□□□□ -0.77
LSAMP-204ENST00000475403 ABCA3Q99758 1704 aa10.24□□□□□ -0.77
LSAMP-204ENST00000475403 TNS1Q9HBL0 1735 aaKnown RBP10.24□□□□□ -0.77
LSAMP-204ENST00000475403 RPGRIP1LQ68CZ1 1315 aa10.24□□□□□ -0.77
LSAMP-204ENST00000475403 FMN2Q9NZ56 1722 aa10.24□□□□□ -0.77
LSAMP-204ENST00000475403 BTG4Q9NY30 223 aa10.23□□□□□ -0.77
LSAMP-204ENST00000475403 NRAPQ86VF7 1730 aa10.23□□□□□ -0.77
LSAMP-204ENST00000475403 PPLO60437 1756 aa10.23□□□□□ -0.77
LSAMP-204ENST00000475403 SENP3-EIF4A1A0A087X0R7 540 aa10.22□□□□□ -0.77
LSAMP-204ENST00000475403 NBPF8Q3BBV2 869 aa10.22□□□□□ -0.77
LSAMP-204ENST00000475403 NBPF14Q5TI25 921 aa10.22□□□□□ -0.77
LSAMP-204ENST00000475403 WAPLQ7Z5K2 1190 aa10.22□□□□□ -0.77
LSAMP-204ENST00000475403 PARD3Q8TEW0 1356 aa10.22□□□□□ -0.77
LSAMP-204ENST00000475403 FAM83GA6ND36 823 aa10.21□□□□□ -0.77
LSAMP-204ENST00000475403 TRIM37O94972 964 aa10.21□□□□□ -0.77
LSAMP-204ENST00000475403 APBA3O96018 575 aa10.21□□□□□ -0.77
LSAMP-204ENST00000475403 PHF8Q9UPP1 1060 aa10.21□□□□□ -0.77
LSAMP-204ENST00000475403 SBNO1A3KN83 1393 aa10.21□□□□□ -0.78
LSAMP-204ENST00000475403 NINLQ9Y2I6 1382 aa10.21□□□□□ -0.78
LSAMP-204ENST00000475403 IFT172Q9UG01 1749 aa10.21□□□□□ -0.78
LSAMP-204ENST00000475403 TECPR2O15040 1411 aa10.2□□□□□ -0.78
LSAMP-204ENST00000475403 COL14A1Q05707 1796 aaKnown RBP10.2□□□□□ -0.78
LSAMP-204ENST00000475403 FAM196AQ6ZSG2 479 aa10.2□□□□□ -0.78
LSAMP-204ENST00000475403 SPON1Q9HCB6 807 aa10.2□□□□□ -0.78
LSAMP-204ENST00000475403 KNDC1Q76NI1 1749 aa10.19□□□□□ -0.78
LSAMP-204ENST00000475403 PLEKHH1Q9ULM0 1364 aa10.19□□□□□ -0.78
LSAMP-204ENST00000475403 CAMKK2Q96RR4 588 aa10.19□□□□□ -0.78
LSAMP-204ENST00000475403 RGPD8O14715 1765 aaPredicted RBP10.19□□□□□ -0.78
LSAMP-204ENST00000475403 THSD7AQ9UPZ6 1657 aa10.18□□□□□ -0.78
LSAMP-204ENST00000475403 NRXN1Q9ULB1 1477 aa10.18□□□□□ -0.78
LSAMP-204ENST00000475403 SPATA31A5Q5VU36 1347 aa10.18□□□□□ -0.78
LSAMP-204ENST00000475403 SPATA31A7Q8IWB4 1347 aa10.18□□□□□ -0.78
LSAMP-204ENST00000475403 RREB1Q92766 1687 aa10.18□□□□□ -0.78
LSAMP-204ENST00000475403 RRBP1Q9P2E9 1410 aaKnown RBP10.17□□□□□ -0.78
LSAMP-204ENST00000475403 NUP188Q5SRE5 1749 aa10.17□□□□□ -0.78
LSAMP-204ENST00000475403 KCNQ2O43526 872 aa10.17□□□□□ -0.78
LSAMP-204ENST00000475403 IFFO2Q5TF58 517 aa10.17□□□□□ -0.78
LSAMP-204ENST00000475403 ABCC11Q96J66 1382 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms