RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 BCL9LQ86UU0 1499 aa27.48■■□□□ 1.99
RNF220-212ENST00000475378 HFM1A2PYH4 1435 aa27.45■■□□□ 1.98
RNF220-212ENST00000475378 FOXD1Q16676 465 aa27.45■■□□□ 1.98
RNF220-212ENST00000475378 PXDNQ92626 1479 aa27.44■■□□□ 1.98
RNF220-212ENST00000475378 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.44■■□□□ 1.98
RNF220-212ENST00000475378 PPLO60437 1756 aa27.44■■□□□ 1.98
RNF220-212ENST00000475378 CDC42BPGQ6DT37 1551 aa27.43■■□□□ 1.98
RNF220-212ENST00000475378 CCDC125Q86Z20 511 aa27.43■■□□□ 1.98
RNF220-212ENST00000475378 VGFO15240 615 aaPredicted RBP27.42■■□□□ 1.98
RNF220-212ENST00000475378 NPHP3Q7Z494 1330 aa27.41■■□□□ 1.98
RNF220-212ENST00000475378 GJD4Q96KN9 370 aaPredicted RBP27.37■■□□□ 1.97
RNF220-212ENST00000475378 BRWD3Q6RI45 1802 aa27.37■■□□□ 1.97
RNF220-212ENST00000475378 GLI3P10071 1580 aa27.36■■□□□ 1.97
RNF220-212ENST00000475378 ESCO1Q5FWF5 840 aa27.35■■□□□ 1.97
RNF220-212ENST00000475378 RPGRIP1LQ68CZ1 1315 aa27.35■■□□□ 1.97
RNF220-212ENST00000475378 SLIT2O94813 1529 aa27.32■■□□□ 1.96
RNF220-212ENST00000475378 FOXO3O43524 673 aa27.32■■□□□ 1.96
RNF220-212ENST00000475378 XPCQ01831 940 aaPredicted RBP27.31■■□□□ 1.96
RNF220-212ENST00000475378 NAIPQ13075 1403 aa27.31■■□□□ 1.96
RNF220-212ENST00000475378 RALGAPBQ86X10 1494 aa27.31■■□□□ 1.96
RNF220-212ENST00000475378 BLMP54132 1417 aaPredicted RBP27.3■■□□□ 1.96
RNF220-212ENST00000475378 LRPPRCP42704 1394 aaKnown RBP27.27■■□□□ 1.96
RNF220-212ENST00000475378 UNC5CLQ8IV45 518 aa27.27■■□□□ 1.96
RNF220-212ENST00000475378 USP32Q8NFA0 1604 aa27.27■■□□□ 1.96
RNF220-212ENST00000475378 TECPR2O15040 1411 aa27.26■■□□□ 1.95
RNF220-212ENST00000475378 FMN2Q9NZ56 1722 aa27.26■■□□□ 1.95
RNF220-212ENST00000475378 KNDC1Q76NI1 1749 aa27.25■■□□□ 1.95
RNF220-212ENST00000475378 KIF1AQ12756 1690 aa27.24■■□□□ 1.95
RNF220-212ENST00000475378 LRP5O75197 1615 aa27.23■■□□□ 1.95
RNF220-212ENST00000475378 SPATA31A3Q5VYP0 1347 aa27.22■■□□□ 1.95
RNF220-212ENST00000475378 IFT172Q9UG01 1749 aa27.21■■□□□ 1.95
RNF220-212ENST00000475378 WAPLQ7Z5K2 1190 aa27.21■■□□□ 1.95
RNF220-212ENST00000475378 DEFB132Q7Z7B7 95 aa27.21■■□□□ 1.95
RNF220-212ENST00000475378 PPARGC1BQ86YN6 1023 aaKnown RBP27.21■■□□□ 1.95
RNF220-212ENST00000475378 RGPD8O14715 1765 aaPredicted RBP27.2■■□□□ 1.95
RNF220-212ENST00000475378 NUTM2FA1L443 756 aa27.2■■□□□ 1.94
RNF220-212ENST00000475378 ADGRF5Q8IZF2 1346 aa27.19■■□□□ 1.94
RNF220-212ENST00000475378 NWD2Q9ULI1 1742 aa27.19■■□□□ 1.94
RNF220-212ENST00000475378 RRBP1Q9P2E9 1410 aaKnown RBP27.19■■□□□ 1.94
RNF220-212ENST00000475378 PLCH1Q4KWH8 1693 aa27.19■■□□□ 1.94
RNF220-212ENST00000475378 PLEKHH1Q9ULM0 1364 aa27.18■■□□□ 1.94
RNF220-212ENST00000475378 CCDC144AA2RUR9 1427 aa27.17■■□□□ 1.94
RNF220-212ENST00000475378 ABCA3Q99758 1704 aa27.17■■□□□ 1.94
RNF220-212ENST00000475378 ABCC11Q96J66 1382 aa27.16■■□□□ 1.94
RNF220-212ENST00000475378 SEPT12Q8IYM1 358 aa27.15■■□□□ 1.94
RNF220-212ENST00000475378 STK26Q9P289 416 aa27.15■■□□□ 1.94
RNF220-212ENST00000475378 SLC4A1APQ9BWU0 796 aaKnown RBP27.14■■□□□ 1.94
RNF220-212ENST00000475378 ONECUT3O60422 494 aaPredicted RBP27.13■■□□□ 1.93
RNF220-212ENST00000475378 VPS72Q15906 364 aa27.12■■□□□ 1.93
RNF220-212ENST00000475378 KRT28Q7Z3Y7 464 aa27.12■■□□□ 1.93
RNF220-212ENST00000475378 TNS3Q68CZ2 1445 aa27.11■■□□□ 1.93
RNF220-212ENST00000475378 SPATA31E1Q6ZUB1 1445 aa27.11■■□□□ 1.93
RNF220-212ENST00000475378 SF3B2Q13435 895 aaKnown RBP27.11■■□□□ 1.93
RNF220-212ENST00000475378 TMEM132EQ6IEE7 984 aa27.09■■□□□ 1.93
RNF220-212ENST00000475378 PIK3C2GO75747 1445 aa27.08■■□□□ 1.93
RNF220-212ENST00000475378 ANKRD30BQ9BXX2 1392 aa27.08■■□□□ 1.93
RNF220-212ENST00000475378 NRAPQ86VF7 1730 aa27.07■■□□□ 1.92
RNF220-212ENST00000475378 YTHDC2Q9H6S0 1430 aaKnown RBP27.07■■□□□ 1.92
RNF220-212ENST00000475378 KRT27Q7Z3Y8 459 aa27.06■■□□□ 1.92
RNF220-212ENST00000475378 CABLES1Q8TDN4 633 aa27.06■■□□□ 1.92
RNF220-212ENST00000475378 RGL3Q3MIN7 710 aa27.04■■□□□ 1.92
RNF220-212ENST00000475378 SBNO1A3KN83 1393 aa27.04■■□□□ 1.92
RNF220-212ENST00000475378 NRXN1Q9ULB1 1477 aa27.04■■□□□ 1.92
RNF220-212ENST00000475378 PHF8Q9UPP1 1060 aa27.03■■□□□ 1.92
RNF220-212ENST00000475378 HAP1P54257 671 aaPredicted RBP27.02■■□□□ 1.92
RNF220-212ENST00000475378 PSME1Q06323 249 aa27.02■■□□□ 1.92
RNF220-212ENST00000475378 SIRT1Q96EB6 747 aa27.02■■□□□ 1.92
RNF220-212ENST00000475378 CCDC9Q9Y3X0 531 aaKnown RBP27■■□□□ 1.91
RNF220-212ENST00000475378 RGPD1P0DJD0 1748 aa26.99■■□□□ 1.91
RNF220-212ENST00000475378 HRCP23327 699 aa26.99■■□□□ 1.91
RNF220-212ENST00000475378 ARHGEF10O15013 1369 aa26.98■■□□□ 1.91
RNF220-212ENST00000475378 PSDA5PKW4 1024 aaPredicted RBP26.98■■□□□ 1.91
RNF220-212ENST00000475378 FAM83GA6ND36 823 aa26.98■■□□□ 1.91
RNF220-212ENST00000475378 TRPM3Q9HCF6 1732 aaPredicted RBP26.98■■□□□ 1.91
RNF220-212ENST00000475378 BAG6P46379 1132 aa26.97■■□□□ 1.91
RNF220-212ENST00000475378 PLEKHG5O94827 1062 aa26.95■■□□□ 1.9
RNF220-212ENST00000475378 ALS2Q96Q42 1657 aa26.94■■□□□ 1.9
RNF220-212ENST00000475378 COL14A1Q05707 1796 aaKnown RBP26.94■■□□□ 1.9
RNF220-212ENST00000475378 TNS1Q9HBL0 1735 aaKnown RBP26.93■■□□□ 1.9
RNF220-212ENST00000475378 C14orf93Q9H972 538 aaKnown RBP26.93■■□□□ 1.9
RNF220-212ENST00000475378 FAM98CQ17RN3 349 aaKnown RBP26.92■■□□□ 1.9
RNF220-212ENST00000475378 LMOD2Q6P5Q4 547 aa26.92■■□□□ 1.9
RNF220-212ENST00000475378 CRYBG1Q9Y4K1 1723 aa26.9■■□□□ 1.9
RNF220-212ENST00000475378 THSD7AQ9UPZ6 1657 aa26.9■■□□□ 1.9
RNF220-212ENST00000475378 ANKARQ7Z5J8 1434 aa26.9■■□□□ 1.9
RNF220-212ENST00000475378 ADGRB2O60241 1585 aa26.89■■□□□ 1.9
RNF220-212ENST00000475378 A0A0G2JS52 829 aa26.89■■□□□ 1.9
RNF220-212ENST00000475378 MYT1Q01538 1121 aa26.89■■□□□ 1.9
RNF220-212ENST00000475378 EN1Q05925 392 aaPredicted RBP26.89■■□□□ 1.9
RNF220-212ENST00000475378 DISP2A7MBM2 1401 aa26.89■■□□□ 1.89
RNF220-212ENST00000475378 BTG4Q9NY30 223 aa26.88■■□□□ 1.89
RNF220-212ENST00000475378 DHX57Q6P158 1386 aaKnown RBP26.87■■□□□ 1.89
RNF220-212ENST00000475378 DLC1Q96QB1 1528 aa26.87■■□□□ 1.89
RNF220-212ENST00000475378 PMFBP1Q8TBY8 1022 aa26.87■■□□□ 1.89
RNF220-212ENST00000475378 PRAM1Q96QH2 718 aa26.87■■□□□ 1.89
RNF220-212ENST00000475378 CFAP70Q5T0N1 1121 aa26.86■■□□□ 1.89
RNF220-212ENST00000475378 MPHOSPH9Q99550 1183 aa26.86■■□□□ 1.89
RNF220-212ENST00000475378 SAFB2Q14151 953 aaKnown RBP eCLIP26.84■■□□□ 1.89
RNF220-212ENST00000475378 SPATA31A5Q5VU36 1347 aa26.84■■□□□ 1.89
RNF220-212ENST00000475378 SPATA31A7Q8IWB4 1347 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms