RNA–Protein interactions for RNA: ENST00000475140.5

PDZD4-204, Transcript of PDZ domain containing 4, humanhuman

TSL 5

Gene PDZD4, Length 830 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-204ENST00000475140 YTHDC2Q9H6S0 1430 aaKnown RBP27.58■■■□□ 2
PDZD4-204ENST00000475140 MYOM2P54296 1465 aa27.57■■■□□ 2
PDZD4-204ENST00000475140 HRCP23327 699 aa27.57■■■□□ 2
PDZD4-204ENST00000475140 C14orf93Q9H972 538 aaKnown RBP27.57■■■□□ 2
PDZD4-204ENST00000475140 CDC42BPGQ6DT37 1551 aa27.56■■■□□ 2
PDZD4-204ENST00000475140 CFAP70Q5T0N1 1121 aa27.56■■■□□ 2
PDZD4-204ENST00000475140 ESCO1Q5FWF5 840 aa27.55■■■□□ 2
PDZD4-204ENST00000475140 ZNF772Q68DY9 489 aaPredicted RBP27.55■■■□□ 2
PDZD4-204ENST00000475140 NRXN1Q9ULB1 1477 aa27.55■■■□□ 2
PDZD4-204ENST00000475140 DHX57Q6P158 1386 aaKnown RBP27.54■■■□□ 2
PDZD4-204ENST00000475140 PNPLA6Q8IY17 1366 aa27.54■■■□□ 2
PDZD4-204ENST00000475140 PLEKHH1Q9ULM0 1364 aa27.54■■■□□ 2
PDZD4-204ENST00000475140 NUTM2FA1L443 756 aa27.53■■■□□ 2
PDZD4-204ENST00000475140 KNDC1Q76NI1 1749 aa27.53■■■□□ 2
PDZD4-204ENST00000475140 LAMC1P11047 1609 aa27.51■■□□□ 1.99
PDZD4-204ENST00000475140 SOS2Q07890 1332 aaPredicted RBP27.5■■□□□ 1.99
PDZD4-204ENST00000475140 KDM2AQ9Y2K7 1162 aa27.5■■□□□ 1.99
PDZD4-204ENST00000475140 DCAF11Q8TEB1 546 aa27.49■■□□□ 1.99
PDZD4-204ENST00000475140 NPHP3Q7Z494 1330 aa27.47■■□□□ 1.99
PDZD4-204ENST00000475140 SIRT1Q96EB6 747 aa27.47■■□□□ 1.99
PDZD4-204ENST00000475140 C8orf37Q96NL8 207 aa27.46■■□□□ 1.99
PDZD4-204ENST00000475140 AFF2P51816 1311 aa27.45■■□□□ 1.99
PDZD4-204ENST00000475140 FOXO3O43524 673 aa27.45■■□□□ 1.98
PDZD4-204ENST00000475140 SAFB2Q14151 953 aaKnown RBP eCLIP27.45■■□□□ 1.98
PDZD4-204ENST00000475140 ADAMTS2O95450 1211 aa27.44■■□□□ 1.98
PDZD4-204ENST00000475140 PRAM1Q96QH2 718 aa27.44■■□□□ 1.98
PDZD4-204ENST00000475140 XPCQ01831 940 aaPredicted RBP27.43■■□□□ 1.98
PDZD4-204ENST00000475140 POGKQ9P215 609 aa27.43■■□□□ 1.98
PDZD4-204ENST00000475140 RXRBP28702 533 aa27.4■■□□□ 1.98
PDZD4-204ENST00000475140 NGLY1Q96IV0 654 aa27.39■■□□□ 1.98
PDZD4-204ENST00000475140 STAC3Q96MF2 364 aa27.39■■□□□ 1.98
PDZD4-204ENST00000475140 FMN2Q9NZ56 1722 aa27.38■■□□□ 1.97
PDZD4-204ENST00000475140 TRAK1Q9UPV9 953 aa27.38■■□□□ 1.97
PDZD4-204ENST00000475140 PXDNQ92626 1479 aa27.38■■□□□ 1.97
PDZD4-204ENST00000475140 DLC1Q96QB1 1528 aa27.36■■□□□ 1.97
PDZD4-204ENST00000475140 ADGRB1O14514 1584 aa27.35■■□□□ 1.97
PDZD4-204ENST00000475140 QTRT2Q9H974 415 aaKnown RBP27.32■■□□□ 1.96
PDZD4-204ENST00000475140 PHF8Q9UPP1 1060 aa27.32■■□□□ 1.96
PDZD4-204ENST00000475140 KIF1AQ12756 1690 aa27.32■■□□□ 1.96
PDZD4-204ENST00000475140 COL22A1Q8NFW1 1626 aaPredicted RBP27.3■■□□□ 1.96
PDZD4-204ENST00000475140 KRT28Q7Z3Y7 464 aa27.3■■□□□ 1.96
PDZD4-204ENST00000475140 HIRIP3Q9BW71 556 aaPredicted RBP27.3■■□□□ 1.96
PDZD4-204ENST00000475140 MINK1Q8N4C8 1332 aaPredicted RBP27.29■■□□□ 1.96
PDZD4-204ENST00000475140 USP21Q9UK80 565 aa27.28■■□□□ 1.96
PDZD4-204ENST00000475140 SPATA31A3Q5VYP0 1347 aa27.26■■□□□ 1.95
PDZD4-204ENST00000475140 RBM6P78332 1123 aaKnown RBP27.26■■□□□ 1.95
PDZD4-204ENST00000475140 PSME1Q06323 249 aa27.26■■□□□ 1.95
PDZD4-204ENST00000475140 CDK12Q9NYV4 1490 aaPredicted RBP27.25■■□□□ 1.95
PDZD4-204ENST00000475140 ANKARQ7Z5J8 1434 aa27.24■■□□□ 1.95
PDZD4-204ENST00000475140 ADGRB2O60241 1585 aa27.24■■□□□ 1.95
PDZD4-204ENST00000475140 PMFBP1Q8TBY8 1022 aa27.24■■□□□ 1.95
PDZD4-204ENST00000475140 EIF3AQ14152 1382 aaKnown RBP27.22■■□□□ 1.95
PDZD4-204ENST00000475140 FNBP4Q8N3X1 1017 aaPredicted RBP27.22■■□□□ 1.95
PDZD4-204ENST00000475140 RGPD8O14715 1765 aaPredicted RBP27.22■■□□□ 1.95
PDZD4-204ENST00000475140 HAP1P54257 671 aaPredicted RBP27.21■■□□□ 1.95
PDZD4-204ENST00000475140 LMOD2Q6P5Q4 547 aa27.21■■□□□ 1.95
PDZD4-204ENST00000475140 TRPC5Q9UL62 973 aaPredicted RBP27.21■■□□□ 1.95
PDZD4-204ENST00000475140 PLEKHG5O94827 1062 aa27.2■■□□□ 1.94
PDZD4-204ENST00000475140 TNS3Q68CZ2 1445 aa27.2■■□□□ 1.94
PDZD4-204ENST00000475140 WASLO00401 505 aaPredicted RBP27.19■■□□□ 1.94
PDZD4-204ENST00000475140 RGS12O14924 1447 aa27.18■■□□□ 1.94
PDZD4-204ENST00000475140 USP32Q8NFA0 1604 aa27.17■■□□□ 1.94
PDZD4-204ENST00000475140 SBNO1A3KN83 1393 aa27.16■■□□□ 1.94
PDZD4-204ENST00000475140 TULP4Q9NRJ4 1543 aa27.16■■□□□ 1.94
PDZD4-204ENST00000475140 UPF1Q92900 1129 aaKnown RBP eCLIP27.15■■□□□ 1.94
PDZD4-204ENST00000475140 PRR36Q9H6K5 1346 aa27.15■■□□□ 1.94
PDZD4-204ENST00000475140 ARHGEF10O15013 1369 aa27.14■■□□□ 1.94
PDZD4-204ENST00000475140 ARHGEF28Q8N1W1 1705 aaKnown RBP27.13■■□□□ 1.93
PDZD4-204ENST00000475140 GPRASP1Q5JY77 1395 aa27.13■■□□□ 1.93
PDZD4-204ENST00000475140 CABLES1Q8TDN4 633 aa27.13■■□□□ 1.93
PDZD4-204ENST00000475140 ATRNO75882 1429 aa27.13■■□□□ 1.93
PDZD4-204ENST00000475140 MARF1Q9Y4F3 1742 aaKnown RBP27.11■■□□□ 1.93
PDZD4-204ENST00000475140 NBPF1Q3BBV0 1214 aa27.11■■□□□ 1.93
PDZD4-204ENST00000475140 NGDNQ8NEJ9 315 aaKnown RBP27.11■■□□□ 1.93
PDZD4-204ENST00000475140 BCL9LQ86UU0 1499 aa27.11■■□□□ 1.93
PDZD4-204ENST00000475140 KIAA1210Q9ULL0 1709 aa27.1■■□□□ 1.93
PDZD4-204ENST00000475140 SIN3AQ96ST3 1273 aa27.08■■□□□ 1.93
PDZD4-204ENST00000475140 NEUROD1Q13562 356 aa27.07■■□□□ 1.92
PDZD4-204ENST00000475140 L3MBTL2Q969R5 705 aa27.07■■□□□ 1.92
PDZD4-204ENST00000475140 NUDT16Q96DE0 195 aaKnown RBP27.07■■□□□ 1.92
PDZD4-204ENST00000475140 CDK19Q9BWU1 502 aa27.07■■□□□ 1.92
PDZD4-204ENST00000475140 PAK3O75914 559 aaPredicted RBP27.06■■□□□ 1.92
PDZD4-204ENST00000475140 UNC5CLQ8IV45 518 aa27.06■■□□□ 1.92
PDZD4-204ENST00000475140 GJD4Q96KN9 370 aaPredicted RBP27.05■■□□□ 1.92
PDZD4-204ENST00000475140 ATP7BP35670 1465 aa27.04■■□□□ 1.92
PDZD4-204ENST00000475140 SLIT2O94813 1529 aa27.04■■□□□ 1.92
PDZD4-204ENST00000475140 ATAD2Q6PL18 1390 aa27.01■■□□□ 1.91
PDZD4-204ENST00000475140 TRPM3Q9HCF6 1732 aaPredicted RBP27.01■■□□□ 1.91
PDZD4-204ENST00000475140 CENPJQ9HC77 1338 aaPredicted RBP27■■□□□ 1.91
PDZD4-204ENST00000475140 ITSN1Q15811 1721 aa27■■□□□ 1.91
PDZD4-204ENST00000475140 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.99■■□□□ 1.91
PDZD4-204ENST00000475140 CCDC9Q9Y3X0 531 aaKnown RBP26.98■■□□□ 1.91
PDZD4-204ENST00000475140 ABCA3Q99758 1704 aa26.98■■□□□ 1.91
PDZD4-204ENST00000475140 SRPK2P78362 688 aaKnown RBP26.97■■□□□ 1.91
PDZD4-204ENST00000475140 CCDC61Q9Y6R9 512 aa26.97■■□□□ 1.91
PDZD4-204ENST00000475140 RALGAPBQ86X10 1494 aa26.97■■□□□ 1.91
PDZD4-204ENST00000475140 ALS2Q96Q42 1657 aa26.95■■□□□ 1.91
PDZD4-204ENST00000475140 FAM83GA6ND36 823 aa26.95■■□□□ 1.9
PDZD4-204ENST00000475140 ACEP12821 1306 aa26.93■■□□□ 1.9
PDZD4-204ENST00000475140 PLCH1Q4KWH8 1693 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms