RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 ATP6V1AP38606 617 aa8.24□□□□□ -1.09
SDHB-204ENST00000475049 HLA-CQ95604 372 aa8.24□□□□□ -1.09
SDHB-204ENST00000475049 PRR14Q9BWN1 585 aa8.24□□□□□ -1.09
SDHB-204ENST00000475049 RFC5P40937 340 aa8.23□□□□□ -1.09
SDHB-204ENST00000475049 QPCTQ16769 361 aa8.23□□□□□ -1.09
SDHB-204ENST00000475049 TUSC1Q2TAM9 212 aa8.23□□□□□ -1.09
SDHB-204ENST00000475049 CABLES1Q8TDN4 633 aa8.23□□□□□ -1.09
SDHB-204ENST00000475049 ZBTB3Q9H5J0 574 aa8.23□□□□□ -1.09
SDHB-204ENST00000475049 NKX2-3Q8TAU0 364 aa8.22□□□□□ -1.09
SDHB-204ENST00000475049 C6orf229H3BNL8 230 aa8.21□□□□□ -1.1
SDHB-204ENST00000475049 COPS2P61201 443 aa8.21□□□□□ -1.1
SDHB-204ENST00000475049 PUS10Q3MIT2 529 aaKnown RBP8.21□□□□□ -1.1
SDHB-204ENST00000475049 PPP2R2DQ66LE6 453 aa8.21□□□□□ -1.1
SDHB-204ENST00000475049 IRX2Q9BZI1 471 aaPredicted RBP8.21□□□□□ -1.1
SDHB-204ENST00000475049 PCDHGC3Q9UN70 934 aa8.21□□□□□ -1.1
SDHB-204ENST00000475049 ACTN4O43707 911 aaKnown RBP8.2□□□□□ -1.1
SDHB-204ENST00000475049 LILRB3O75022 631 aa8.2□□□□□ -1.1
SDHB-204ENST00000475049 AP1G2O75843 785 aa8.2□□□□□ -1.1
SDHB-204ENST00000475049 HRCP23327 699 aa8.2□□□□□ -1.1
SDHB-204ENST00000475049 TMEM259Q4ZIN3 620 aa8.2□□□□□ -1.1
SDHB-204ENST00000475049 RTL5Q5HYW3 569 aaPredicted RBP8.2□□□□□ -1.1
SDHB-204ENST00000475049 PRPF38BQ5VTL8 546 aaKnown RBP8.2□□□□□ -1.1
SDHB-204ENST00000475049 PPP1R18Q6NYC8 613 aa8.2□□□□□ -1.1
SDHB-204ENST00000475049 TSC1Q92574 1164 aa8.2□□□□□ -1.1
SDHB-204ENST00000475049 ZPR1O75312 459 aa8.19□□□□□ -1.1
SDHB-204ENST00000475049 UBTFP17480 764 aaKnown RBP8.19□□□□□ -1.1
SDHB-204ENST00000475049 MTMR2Q13614 643 aa8.19□□□□□ -1.1
SDHB-204ENST00000475049 FBXO31Q5XUX0 539 aaPredicted RBP8.19□□□□□ -1.1
SDHB-204ENST00000475049 ZMYND15Q9H091 742 aa8.19□□□□□ -1.1
SDHB-204ENST00000475049 PCDHB3Q9Y5E6 796 aa8.19□□□□□ -1.1
SDHB-204ENST00000475049 MCM6Q14566 821 aa8.18□□□□□ -1.1
SDHB-204ENST00000475049 BLOC1S3Q6QNY0 202 aa8.18□□□□□ -1.1
SDHB-204ENST00000475049 MORN1Q5T089 497 aa8.17□□□□□ -1.1
SDHB-204ENST00000475049 BANK1Q8NDB2 785 aa8.17□□□□□ -1.1
SDHB-204ENST00000475049 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.17□□□□□ -1.1
SDHB-204ENST00000475049 SPDYE5A6NIY4 337 aa8.16□□□□□ -1.1
SDHB-204ENST00000475049 Q3C1V9 767 aa8.16□□□□□ -1.1
SDHB-204ENST00000475049 SYMPKQ92797 1274 aaKnown RBP8.16□□□□□ -1.1
SDHB-204ENST00000475049 SLC27A5Q9Y2P5 690 aa8.16□□□□□ -1.1
SDHB-204ENST00000475049 SUPT5HO00267 1087 aaKnown RBP8.15□□□□□ -1.1
SDHB-204ENST00000475049 RAD21O60216 631 aa8.15□□□□□ -1.1
SDHB-204ENST00000475049 HELBQ8NG08 1087 aaPredicted RBP8.15□□□□□ -1.1
SDHB-204ENST00000475049 SNRKQ9NRH2 765 aa8.15□□□□□ -1.1
SDHB-204ENST00000475049 NR1I2O75469 434 aa8.14□□□□□ -1.11
SDHB-204ENST00000475049 PRKD2Q9BZL6 878 aa8.14□□□□□ -1.11
SDHB-204ENST00000475049 USP17L8P0C7I0 530 aa8.13□□□□□ -1.11
SDHB-204ENST00000475049 PRR7Q8TB68 274 aa8.13□□□□□ -1.11
SDHB-204ENST00000475049 CLUAP1Q96AJ1 413 aa8.13□□□□□ -1.11
SDHB-204ENST00000475049 V9GY48 417 aaPredicted RBP8.13□□□□□ -1.11
SDHB-204ENST00000475049 CFAP99D6REC4 459 aa8.12□□□□□ -1.11
SDHB-204ENST00000475049 GGCXP38435 758 aa8.12□□□□□ -1.11
SDHB-204ENST00000475049 RETREG3Q86VR2 466 aa8.12□□□□□ -1.11
SDHB-204ENST00000475049 SCUBE3Q8IX30 993 aa8.12□□□□□ -1.11
SDHB-204ENST00000475049 APBB1O00213 710 aa8.11□□□□□ -1.11
SDHB-204ENST00000475049 FMNL1O95466 1100 aaPredicted RBP8.11□□□□□ -1.11
SDHB-204ENST00000475049 CTDSPL2Q05D32 466 aa8.11□□□□□ -1.11
SDHB-204ENST00000475049 RNF19BQ6ZMZ0 732 aa8.11□□□□□ -1.11
SDHB-204ENST00000475049 TLL1O43897 1013 aa8.1□□□□□ -1.11
SDHB-204ENST00000475049 PRM3Q9NNZ6 103 aa8.1□□□□□ -1.11
SDHB-204ENST00000475049 MTMR14Q8NCE2 650 aa8.09□□□□□ -1.11
SDHB-204ENST00000475049 POM121Q96HA1 1249 aa8.09□□□□□ -1.11
SDHB-204ENST00000475049 USB1Q9BQ65 265 aaKnown RBP8.09□□□□□ -1.11
SDHB-204ENST00000475049 RNF223E7ERA6 249 aa8.08□□□□□ -1.12
SDHB-204ENST00000475049 A6NJR5 290 aa8.07□□□□□ -1.12
SDHB-204ENST00000475049 LAPTM4AQ15012 233 aa8.07□□□□□ -1.12
SDHB-204ENST00000475049 BRICD5Q6PL45 260 aa8.07□□□□□ -1.12
SDHB-204ENST00000475049 LRRN4Q8WUT4 740 aa8.07□□□□□ -1.12
SDHB-204ENST00000475049 EMID1Q96A84 441 aaPredicted RBP8.07□□□□□ -1.12
SDHB-204ENST00000475049 SALL2Q9Y467 1007 aaPredicted RBP8.07□□□□□ -1.12
SDHB-204ENST00000475049 GFRA3O60609 400 aa8.06□□□□□ -1.12
SDHB-204ENST00000475049 ADH1BP00325 375 aa8.06□□□□□ -1.12
SDHB-204ENST00000475049 PROSER2Q86WR7 435 aaPredicted RBP8.06□□□□□ -1.12
SDHB-204ENST00000475049 SPSB2Q99619 263 aa8.06□□□□□ -1.12
SDHB-204ENST00000475049 GDPD2Q9HCC8 539 aa8.06□□□□□ -1.12
SDHB-204ENST00000475049 COG6Q9Y2V7 657 aa8.06□□□□□ -1.12
SDHB-204ENST00000475049 S1PR4O95977 384 aa8.05□□□□□ -1.12
SDHB-204ENST00000475049 ABL2P42684 1182 aa8.05□□□□□ -1.12
SDHB-204ENST00000475049 WWC1Q8IX03 1113 aa8.05□□□□□ -1.12
SDHB-204ENST00000475049 THAP11Q96EK4 314 aa8.05□□□□□ -1.12
SDHB-204ENST00000475049 PER1O15534 1290 aaPredicted RBP8.04□□□□□ -1.12
SDHB-204ENST00000475049 TRAK2O60296 914 aa8.04□□□□□ -1.12
SDHB-204ENST00000475049 ANKLE1Q8NAG6 615 aa8.04□□□□□ -1.12
SDHB-204ENST00000475049 HMX1Q9NP08 348 aaPredicted RBP8.04□□□□□ -1.12
SDHB-204ENST00000475049 TBC1D2BQ9UPU7 963 aa8.04□□□□□ -1.12
SDHB-204ENST00000475049 NDUFB9Q9Y6M9 179 aa8.04□□□□□ -1.12
SDHB-204ENST00000475049 SOCS7O14512 581 aa8.03□□□□□ -1.12
SDHB-204ENST00000475049 PPEF1O14829 653 aaPredicted RBP8.03□□□□□ -1.12
SDHB-204ENST00000475049 SLC19A1P41440 591 aa8.03□□□□□ -1.12
SDHB-204ENST00000475049 DESI1Q6ICB0 168 aa8.03□□□□□ -1.12
SDHB-204ENST00000475049 Q6ZNB5 142 aa8.03□□□□□ -1.12
SDHB-204ENST00000475049 ARID3CA6NKF2 412 aa8.02□□□□□ -1.13
SDHB-204ENST00000475049 NRG2O14511 850 aaPredicted RBP8.02□□□□□ -1.13
SDHB-204ENST00000475049 JUNDP17535 347 aa8.02□□□□□ -1.13
SDHB-204ENST00000475049 LYPD8Q6UX82 237 aa8.02□□□□□ -1.13
SDHB-204ENST00000475049 SLC6A16Q9GZN6 736 aa8.02□□□□□ -1.13
SDHB-204ENST00000475049 LCE2BO14633 110 aa8.01□□□□□ -1.13
SDHB-204ENST00000475049 NR6A1Q15406 480 aa8.01□□□□□ -1.13
SDHB-204ENST00000475049 LIAT1Q6ZQX7 453 aa8.01□□□□□ -1.13
SDHB-204ENST00000475049 GJD4Q96KN9 370 aaPredicted RBP8.01□□□□□ -1.13
SDHB-204ENST00000475049 ZNF330Q9Y3S2 320 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms