RNA–Protein interactions for RNA: ENST00000474805.5

TRIM13-207, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-207ENST00000474805 EP400Q96L91 3159 aa18.94■□□□□ 0.62
TRIM13-207ENST00000474805 VGFO15240 615 aaPredicted RBP18.94■□□□□ 0.62
TRIM13-207ENST00000474805 ESCO1Q5FWF5 840 aa18.94■□□□□ 0.62
TRIM13-207ENST00000474805 MYOM2P54296 1465 aa18.93■□□□□ 0.62
TRIM13-207ENST00000474805 XPCQ01831 940 aaPredicted RBP18.93■□□□□ 0.62
TRIM13-207ENST00000474805 GJD4Q96KN9 370 aaPredicted RBP18.92■□□□□ 0.62
TRIM13-207ENST00000474805 PPARGC1BQ86YN6 1023 aaKnown RBP18.91■□□□□ 0.62
TRIM13-207ENST00000474805 NPHP3Q7Z494 1330 aa18.91■□□□□ 0.62
TRIM13-207ENST00000474805 PXDNQ92626 1479 aa18.9■□□□□ 0.62
TRIM13-207ENST00000474805 FOXO3O43524 673 aa18.9■□□□□ 0.62
TRIM13-207ENST00000474805 HFM1A2PYH4 1435 aa18.9■□□□□ 0.62
TRIM13-207ENST00000474805 PRAG1Q86YV5 1406 aa18.89■□□□□ 0.61
TRIM13-207ENST00000474805 PPLO60437 1756 aa18.88■□□□□ 0.61
TRIM13-207ENST00000474805 BRWD3Q6RI45 1802 aa18.88■□□□□ 0.61
TRIM13-207ENST00000474805 NUTM2FA1L443 756 aa18.87■□□□□ 0.61
TRIM13-207ENST00000474805 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.87■□□□□ 0.61
TRIM13-207ENST00000474805 CDC42BPGQ6DT37 1551 aa18.86■□□□□ 0.61
TRIM13-207ENST00000474805 RPGRIP1LQ68CZ1 1315 aa18.86■□□□□ 0.61
TRIM13-207ENST00000474805 GLI3P10071 1580 aa18.85■□□□□ 0.61
TRIM13-207ENST00000474805 DEFB132Q7Z7B7 95 aa18.84■□□□□ 0.61
TRIM13-207ENST00000474805 UNC5CLQ8IV45 518 aa18.84■□□□□ 0.61
TRIM13-207ENST00000474805 RALGAPBQ86X10 1494 aa18.84■□□□□ 0.61
TRIM13-207ENST00000474805 BLMP54132 1417 aaPredicted RBP18.83■□□□□ 0.61
TRIM13-207ENST00000474805 WAPLQ7Z5K2 1190 aa18.83■□□□□ 0.6
TRIM13-207ENST00000474805 NAIPQ13075 1403 aa18.83■□□□□ 0.6
TRIM13-207ENST00000474805 LRPPRCP42704 1394 aaKnown RBP18.82■□□□□ 0.6
TRIM13-207ENST00000474805 STK26Q9P289 416 aa18.82■□□□□ 0.6
TRIM13-207ENST00000474805 SLIT2O94813 1529 aa18.81■□□□□ 0.6
TRIM13-207ENST00000474805 SPATA31A3Q5VYP0 1347 aa18.79■□□□□ 0.6
TRIM13-207ENST00000474805 SF3B2Q13435 895 aaKnown RBP18.78■□□□□ 0.6
TRIM13-207ENST00000474805 SEPT12Q8IYM1 358 aa18.78■□□□□ 0.6
TRIM13-207ENST00000474805 RGPD8O14715 1765 aaPredicted RBP18.78■□□□□ 0.6
TRIM13-207ENST00000474805 USP32Q8NFA0 1604 aa18.78■□□□□ 0.6
TRIM13-207ENST00000474805 ADGRF5Q8IZF2 1346 aa18.77■□□□□ 0.6
TRIM13-207ENST00000474805 PLEKHG5O94827 1062 aa18.77■□□□□ 0.6
TRIM13-207ENST00000474805 KRT28Q7Z3Y7 464 aa18.77■□□□□ 0.6
TRIM13-207ENST00000474805 SLC4A1APQ9BWU0 796 aaKnown RBP18.77■□□□□ 0.6
TRIM13-207ENST00000474805 FMN2Q9NZ56 1722 aa18.77■□□□□ 0.59
TRIM13-207ENST00000474805 PLEKHH1Q9ULM0 1364 aa18.76■□□□□ 0.59
TRIM13-207ENST00000474805 TMEM132EQ6IEE7 984 aa18.75■□□□□ 0.59
TRIM13-207ENST00000474805 CABLES1Q8TDN4 633 aa18.75■□□□□ 0.59
TRIM13-207ENST00000474805 KIF1AQ12756 1690 aa18.75■□□□□ 0.59
TRIM13-207ENST00000474805 PLCH1Q4KWH8 1693 aa18.74■□□□□ 0.59
TRIM13-207ENST00000474805 HAP1P54257 671 aaPredicted RBP18.74■□□□□ 0.59
TRIM13-207ENST00000474805 TECPR2O15040 1411 aa18.74■□□□□ 0.59
TRIM13-207ENST00000474805 VPS72Q15906 364 aa18.73■□□□□ 0.59
TRIM13-207ENST00000474805 RGL3Q3MIN7 710 aa18.73■□□□□ 0.59
TRIM13-207ENST00000474805 CCDC9Q9Y3X0 531 aaKnown RBP18.73■□□□□ 0.59
TRIM13-207ENST00000474805 LRP5O75197 1615 aa18.73■□□□□ 0.59
TRIM13-207ENST00000474805 KNDC1Q76NI1 1749 aa18.72■□□□□ 0.59
TRIM13-207ENST00000474805 KRT27Q7Z3Y8 459 aa18.72■□□□□ 0.59
TRIM13-207ENST00000474805 CCDC144AA2RUR9 1427 aa18.72■□□□□ 0.59
TRIM13-207ENST00000474805 RRBP1Q9P2E9 1410 aaKnown RBP18.72■□□□□ 0.59
TRIM13-207ENST00000474805 NWD2Q9ULI1 1742 aa18.71■□□□□ 0.59
TRIM13-207ENST00000474805 ABCC11Q96J66 1382 aa18.71■□□□□ 0.59
TRIM13-207ENST00000474805 PSDA5PKW4 1024 aaPredicted RBP18.71■□□□□ 0.59
TRIM13-207ENST00000474805 ONECUT3O60422 494 aaPredicted RBP18.71■□□□□ 0.59
TRIM13-207ENST00000474805 IFT172Q9UG01 1749 aa18.71■□□□□ 0.59
TRIM13-207ENST00000474805 LMOD2Q6P5Q4 547 aa18.69■□□□□ 0.58
TRIM13-207ENST00000474805 ABCA3Q99758 1704 aa18.69■□□□□ 0.58
TRIM13-207ENST00000474805 TNS3Q68CZ2 1445 aa18.68■□□□□ 0.58
TRIM13-207ENST00000474805 PSME1Q06323 249 aa18.68■□□□□ 0.58
TRIM13-207ENST00000474805 PHF8Q9UPP1 1060 aa18.68■□□□□ 0.58
TRIM13-207ENST00000474805 YTHDC2Q9H6S0 1430 aaKnown RBP18.66■□□□□ 0.58
TRIM13-207ENST00000474805 A0A0G2JS52 829 aa18.66■□□□□ 0.58
TRIM13-207ENST00000474805 FAM83GA6ND36 823 aa18.66■□□□□ 0.58
TRIM13-207ENST00000474805 HRCP23327 699 aa18.66■□□□□ 0.58
TRIM13-207ENST00000474805 MYT1Q01538 1121 aa18.66■□□□□ 0.58
TRIM13-207ENST00000474805 ANKRD30BQ9BXX2 1392 aa18.66■□□□□ 0.58
TRIM13-207ENST00000474805 BAG6P46379 1132 aa18.65■□□□□ 0.58
TRIM13-207ENST00000474805 SPATA31E1Q6ZUB1 1445 aa18.65■□□□□ 0.58
TRIM13-207ENST00000474805 FAM98CQ17RN3 349 aaKnown RBP18.63■□□□□ 0.57
TRIM13-207ENST00000474805 SBNO1A3KN83 1393 aa18.63■□□□□ 0.57
TRIM13-207ENST00000474805 PIK3C2GO75747 1445 aa18.63■□□□□ 0.57
TRIM13-207ENST00000474805 EN1Q05925 392 aaPredicted RBP18.62■□□□□ 0.57
TRIM13-207ENST00000474805 SIRT1Q96EB6 747 aa18.62■□□□□ 0.57
TRIM13-207ENST00000474805 NRXN1Q9ULB1 1477 aa18.62■□□□□ 0.57
TRIM13-207ENST00000474805 NRAPQ86VF7 1730 aa18.62■□□□□ 0.57
TRIM13-207ENST00000474805 ARHGEF10O15013 1369 aa18.61■□□□□ 0.57
TRIM13-207ENST00000474805 SAFB2Q14151 953 aaKnown RBP eCLIP18.61■□□□□ 0.57
TRIM13-207ENST00000474805 FAM182BQ5T319 152 aa18.61■□□□□ 0.57
TRIM13-207ENST00000474805 PMFBP1Q8TBY8 1022 aa18.61■□□□□ 0.57
TRIM13-207ENST00000474805 RGPD1P0DJD0 1748 aa18.6■□□□□ 0.57
TRIM13-207ENST00000474805 BTG4Q9NY30 223 aa18.6■□□□□ 0.57
TRIM13-207ENST00000474805 C14orf93Q9H972 538 aaKnown RBP18.58■□□□□ 0.56
TRIM13-207ENST00000474805 R3HDM1Q15032 1099 aaKnown RBP18.57■□□□□ 0.56
TRIM13-207ENST00000474805 CFAP70Q5T0N1 1121 aa18.57■□□□□ 0.56
TRIM13-207ENST00000474805 PRAM1Q96QH2 718 aa18.57■□□□□ 0.56
TRIM13-207ENST00000474805 DHX57Q6P158 1386 aaKnown RBP18.56■□□□□ 0.56
TRIM13-207ENST00000474805 COL14A1Q05707 1796 aaKnown RBP18.56■□□□□ 0.56
TRIM13-207ENST00000474805 MPHOSPH9Q99550 1183 aa18.56■□□□□ 0.56
TRIM13-207ENST00000474805 TRPM3Q9HCF6 1732 aaPredicted RBP18.55■□□□□ 0.56
TRIM13-207ENST00000474805 TNS1Q9HBL0 1735 aaKnown RBP18.54■□□□□ 0.56
TRIM13-207ENST00000474805 ALS2Q96Q42 1657 aa18.54■□□□□ 0.56
TRIM13-207ENST00000474805 EZH2Q15910 746 aaKnown RBP18.53■□□□□ 0.56
TRIM13-207ENST00000474805 POGKQ9P215 609 aa18.53■□□□□ 0.56
TRIM13-207ENST00000474805 SPATA31A5Q5VU36 1347 aa18.52■□□□□ 0.56
TRIM13-207ENST00000474805 SPATA31A7Q8IWB4 1347 aa18.52■□□□□ 0.56
TRIM13-207ENST00000474805 ANKARQ7Z5J8 1434 aa18.51■□□□□ 0.55
TRIM13-207ENST00000474805 THSD7AQ9UPZ6 1657 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms