RNA–Protein interactions for RNA: ENST00000474275.5

PHC3-205, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 2,427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-205ENST00000474275 UPF1Q92900 1129 aaKnown RBP eCLIP6.86□□□□□ -1.31
PHC3-205ENST00000474275 JCADQ9P266 1359 aa6.85□□□□□ -1.31
PHC3-205ENST00000474275 BCL11BQ9C0K0 894 aaPredicted RBP6.85□□□□□ -1.31
PHC3-205ENST00000474275 SLC52A1Q9NWF4 448 aa6.85□□□□□ -1.31
PHC3-205ENST00000474275 ANKRD30AQ9BXX3 1397 aa6.85□□□□□ -1.31
PHC3-205ENST00000474275 NPM2Q86SE8 214 aaKnown RBP6.85□□□□□ -1.31
PHC3-205ENST00000474275 TRIM52Q96A61 297 aa6.85□□□□□ -1.31
PHC3-205ENST00000474275 GTF3C3Q9Y5Q9 886 aa6.85□□□□□ -1.31
PHC3-205ENST00000474275 PLEKHG1Q9ULL1 1385 aa6.84□□□□□ -1.31
PHC3-205ENST00000474275 RIMS2Q9UQ26 1411 aa6.84□□□□□ -1.31
PHC3-205ENST00000474275 PLCD3Q8N3E9 789 aa6.84□□□□□ -1.31
PHC3-205ENST00000474275 TBX22Q9Y458 520 aa6.84□□□□□ -1.31
PHC3-205ENST00000474275 ADAMTS13Q76LX8 1427 aa6.84□□□□□ -1.31
PHC3-205ENST00000474275 TMEM131LA2VDJ0 1609 aa6.84□□□□□ -1.31
PHC3-205ENST00000474275 GCC2Q8IWJ2 1684 aa6.84□□□□□ -1.32
PHC3-205ENST00000474275 NEUROD1Q13562 356 aa6.84□□□□□ -1.32
PHC3-205ENST00000474275 SPRYD3Q8NCJ5 442 aa6.84□□□□□ -1.32
PHC3-205ENST00000474275 PCDH10Q9P2E7 1040 aa6.84□□□□□ -1.32
PHC3-205ENST00000474275 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.83□□□□□ -1.32
PHC3-205ENST00000474275 PTPRUQ92729 1446 aa6.83□□□□□ -1.32
PHC3-205ENST00000474275 EP400Q96L91 3159 aa6.82□□□□□ -1.32
PHC3-205ENST00000474275 ADGRL2O95490 1459 aa6.82□□□□□ -1.32
PHC3-205ENST00000474275 PPP1R15AO75807 674 aaPredicted RBP6.82□□□□□ -1.32
PHC3-205ENST00000474275 CHGAP10645 457 aaKnown RBP6.82□□□□□ -1.32
PHC3-205ENST00000474275 BRINP3Q76B58 766 aa6.82□□□□□ -1.32
PHC3-205ENST00000474275 CHMP4AQ9BY43 222 aa6.82□□□□□ -1.32
PHC3-205ENST00000474275 C19orf44Q9H6X5 657 aa6.82□□□□□ -1.32
PHC3-205ENST00000474275 ANKRD50Q9ULJ7 1429 aa6.82□□□□□ -1.32
PHC3-205ENST00000474275 SPATA31A6Q5VVP1 1343 aa6.81□□□□□ -1.32
PHC3-205ENST00000474275 NUTM2BA6NNL0 878 aaPredicted RBP6.81□□□□□ -1.32
PHC3-205ENST00000474275 NUTM2EB1AL46 878 aaPredicted RBP6.81□□□□□ -1.32
PHC3-205ENST00000474275 TAF7LQ5H9L4 462 aa6.81□□□□□ -1.32
PHC3-205ENST00000474275 NUTM2AQ8IVF1 878 aaPredicted RBP6.81□□□□□ -1.32
PHC3-205ENST00000474275 DDX17Q92841 729 aaKnown RBP6.81□□□□□ -1.32
PHC3-205ENST00000474275 DIP2AQ14689 1571 aa6.81□□□□□ -1.32
PHC3-205ENST00000474275 FAM50AQ14320 339 aaKnown RBP6.81□□□□□ -1.32
PHC3-205ENST00000474275 MEX3CQ5U5Q3 659 aaKnown RBP6.81□□□□□ -1.32
PHC3-205ENST00000474275 C14orf37Q86TY3 774 aa6.81□□□□□ -1.32
PHC3-205ENST00000474275 AMOTL2Q9Y2J4 779 aa6.81□□□□□ -1.32
PHC3-205ENST00000474275 RPRD2Q5VT52 1461 aaKnown RBP6.81□□□□□ -1.32
PHC3-205ENST00000474275 AHDC1Q5TGY3 1603 aaPredicted RBP6.81□□□□□ -1.32
PHC3-205ENST00000474275 E9PCH4 1651 aa6.8□□□□□ -1.32
PHC3-205ENST00000474275 ZNF772Q68DY9 489 aaPredicted RBP6.8□□□□□ -1.32
PHC3-205ENST00000474275 ZNF692Q9BU19 519 aaPredicted RBP6.8□□□□□ -1.32
PHC3-205ENST00000474275 NCOA3Q9Y6Q9 1424 aa6.8□□□□□ -1.32
PHC3-205ENST00000474275 SHPRHQ149N8 1683 aa6.8□□□□□ -1.32
PHC3-205ENST00000474275 RXRBP28702 533 aa6.8□□□□□ -1.32
PHC3-205ENST00000474275 CADPS2Q86UW7 1296 aa6.8□□□□□ -1.32
PHC3-205ENST00000474275 ATF3P18847 181 aa6.79□□□□□ -1.32
PHC3-205ENST00000474275 AFF2P51816 1311 aa6.79□□□□□ -1.32
PHC3-205ENST00000474275 HDGFP51858 240 aaKnown RBP6.79□□□□□ -1.32
PHC3-205ENST00000474275 MIER1Q8N108 512 aa6.79□□□□□ -1.32
PHC3-205ENST00000474275 CCDC136Q96JN2 1154 aa6.79□□□□□ -1.32
PHC3-205ENST00000474275 CIZ1Q9ULV3 898 aaPredicted RBP6.79□□□□□ -1.32
PHC3-205ENST00000474275 PIP4P2Q8N4L2 257 aa6.78□□□□□ -1.32
PHC3-205ENST00000474275 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.78□□□□□ -1.32
PHC3-205ENST00000474275 NRXN3Q9Y4C0 1643 aa6.78□□□□□ -1.32
PHC3-205ENST00000474275 METP08581 1390 aa6.78□□□□□ -1.32
PHC3-205ENST00000474275 UNC13BO14795 1591 aa6.78□□□□□ -1.32
PHC3-205ENST00000474275 MST1RQ04912 1400 aa6.77□□□□□ -1.33
PHC3-205ENST00000474275 DHX37Q8IY37 1157 aaKnown RBP6.77□□□□□ -1.33
PHC3-205ENST00000474275 PIK3R4Q99570 1358 aa6.77□□□□□ -1.33
PHC3-205ENST00000474275 ASXL1Q8IXJ9 1541 aa6.77□□□□□ -1.33
PHC3-205ENST00000474275 AAMPQ13685 434 aa6.77□□□□□ -1.33
PHC3-205ENST00000474275 QTRT2Q9H974 415 aaKnown RBP6.77□□□□□ -1.33
PHC3-205ENST00000474275 ZBTB12Q9Y330 459 aaPredicted RBP6.77□□□□□ -1.33
PHC3-205ENST00000474275 RGS12O14924 1447 aa6.76□□□□□ -1.33
PHC3-205ENST00000474275 SETD5Q9C0A6 1442 aa6.76□□□□□ -1.33
PHC3-205ENST00000474275 C8orf37Q96NL8 207 aa6.76□□□□□ -1.33
PHC3-205ENST00000474275 XRN1Q8IZH2 1706 aaKnown RBP6.76□□□□□ -1.33
PHC3-205ENST00000474275 NHSL1Q5SYE7 1610 aa6.76□□□□□ -1.33
PHC3-205ENST00000474275 TRPM2O94759 1503 aa6.76□□□□□ -1.33
PHC3-205ENST00000474275 ERICH6BQ5W0A0 696 aa6.76□□□□□ -1.33
PHC3-205ENST00000474275 CDK12Q9NYV4 1490 aaPredicted RBP6.75□□□□□ -1.33
PHC3-205ENST00000474275 IQGAP3Q86VI3 1631 aa6.75□□□□□ -1.33
PHC3-205ENST00000474275 NUP155O75694 1391 aa6.75□□□□□ -1.33
PHC3-205ENST00000474275 PNPLA6Q8IY17 1366 aa6.75□□□□□ -1.33
PHC3-205ENST00000474275 ADAMTS2O95450 1211 aa6.75□□□□□ -1.33
PHC3-205ENST00000474275 LRRC59Q96AG4 307 aaKnown RBP6.75□□□□□ -1.33
PHC3-205ENST00000474275 DCCP43146 1447 aa6.74□□□□□ -1.33
PHC3-205ENST00000474275 BRD2P25440 801 aaKnown RBP6.74□□□□□ -1.33
PHC3-205ENST00000474275 ORAI2Q96SN7 254 aa6.74□□□□□ -1.33
PHC3-205ENST00000474275 SETBP1Q9Y6X0 1596 aa6.74□□□□□ -1.33
PHC3-205ENST00000474275 ITGAEP38570 1179 aa6.74□□□□□ -1.33
PHC3-205ENST00000474275 RBM6P78332 1123 aaKnown RBP6.74□□□□□ -1.33
PHC3-205ENST00000474275 NALCNQ8IZF0 1738 aa6.73□□□□□ -1.33
PHC3-205ENST00000474275 NBR1Q14596 966 aa6.72□□□□□ -1.33
PHC3-205ENST00000474275 ZNF326Q5BKZ1 582 aaKnown RBP6.72□□□□□ -1.33
PHC3-205ENST00000474275 NGLY1Q96IV0 654 aa6.72□□□□□ -1.33
PHC3-205ENST00000474275 ROCK1Q13464 1354 aa6.72□□□□□ -1.33
PHC3-205ENST00000474275 ADGRL3Q9HAR2 1447 aa6.72□□□□□ -1.33
PHC3-205ENST00000474275 C1orf167Q5SNV9 1468 aa6.72□□□□□ -1.33
PHC3-205ENST00000474275 SSUH2Q9Y2M2 353 aa6.72□□□□□ -1.33
PHC3-205ENST00000474275 RSPH6AQ9H0K4 717 aa6.71□□□□□ -1.33
PHC3-205ENST00000474275 NEXMIFQ5QGS0 1516 aa6.71□□□□□ -1.33
PHC3-205ENST00000474275 RNF25Q96BH1 459 aaPredicted RBP6.71□□□□□ -1.34
PHC3-205ENST00000474275 SOS2Q07890 1332 aaPredicted RBP6.71□□□□□ -1.34
PHC3-205ENST00000474275 ROBO2Q9HCK4 1378 aa6.71□□□□□ -1.34
PHC3-205ENST00000474275 SPHKAPQ2M3C7 1700 aa6.71□□□□□ -1.34
PHC3-205ENST00000474275 CLTCL1P53675 1640 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms