RNA–Protein interactions for RNA: ENST00000474252.1

LIN7B-205, Transcript of lin-7 homolog B, crumbs cell polarity complex component, humanhuman

TSL 3

Gene LIN7B, Length 521 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7B-205ENST00000474252 CDC42BPGQ6DT37 1551 aa24.94■■□□□ 1.58
LIN7B-205ENST00000474252 CADPS2Q86UW7 1296 aa24.94■■□□□ 1.58
LIN7B-205ENST00000474252 ARHGEF28Q8N1W1 1705 aaKnown RBP24.94■■□□□ 1.58
LIN7B-205ENST00000474252 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.94■■□□□ 1.58
LIN7B-205ENST00000474252 POGKQ9P215 609 aa24.92■■□□□ 1.58
LIN7B-205ENST00000474252 ADGRB2O60241 1585 aa24.9■■□□□ 1.58
LIN7B-205ENST00000474252 ATF3P18847 181 aa24.9■■□□□ 1.58
LIN7B-205ENST00000474252 MST1RQ04912 1400 aa24.89■■□□□ 1.58
LIN7B-205ENST00000474252 CARD11Q9BXL7 1154 aa24.89■■□□□ 1.58
LIN7B-205ENST00000474252 EIF3AQ14152 1382 aaKnown RBP24.88■■□□□ 1.57
LIN7B-205ENST00000474252 SAFB2Q14151 953 aaKnown RBP eCLIP24.87■■□□□ 1.57
LIN7B-205ENST00000474252 CENPJQ9HC77 1338 aaPredicted RBP24.86■■□□□ 1.57
LIN7B-205ENST00000474252 SLAIN2Q9P270 581 aa24.86■■□□□ 1.57
LIN7B-205ENST00000474252 C1orf167Q5SNV9 1468 aa24.83■■□□□ 1.56
LIN7B-205ENST00000474252 MINK1Q8N4C8 1332 aaPredicted RBP24.82■■□□□ 1.56
LIN7B-205ENST00000474252 PIP4K2BP78356 416 aa24.81■■□□□ 1.56
LIN7B-205ENST00000474252 SBNO2Q9Y2G9 1366 aa24.8■■□□□ 1.56
LIN7B-205ENST00000474252 HIRIP3Q9BW71 556 aaPredicted RBP24.79■■□□□ 1.56
LIN7B-205ENST00000474252 FMN2Q9NZ56 1722 aa24.78■■□□□ 1.56
LIN7B-205ENST00000474252 ANKARQ7Z5J8 1434 aa24.78■■□□□ 1.56
LIN7B-205ENST00000474252 WASLO00401 505 aaPredicted RBP24.77■■□□□ 1.56
LIN7B-205ENST00000474252 SCAF1Q9H7N4 1312 aaKnown RBP24.77■■□□□ 1.56
LIN7B-205ENST00000474252 USP47Q96K76 1375 aa24.77■■□□□ 1.56
LIN7B-205ENST00000474252 QRICH2Q9H0J4 1663 aa24.76■■□□□ 1.55
LIN7B-205ENST00000474252 ROBO1Q9Y6N7 1651 aa24.76■■□□□ 1.55
LIN7B-205ENST00000474252 BRINP3Q76B58 766 aa24.76■■□□□ 1.55
LIN7B-205ENST00000474252 ILDR1Q86SU0 546 aaPredicted RBP24.76■■□□□ 1.55
LIN7B-205ENST00000474252 TULP4Q9NRJ4 1543 aa24.76■■□□□ 1.55
LIN7B-205ENST00000474252 ATP7BP35670 1465 aa24.7■■□□□ 1.55
LIN7B-205ENST00000474252 PRR36Q9H6K5 1346 aa24.7■■□□□ 1.54
LIN7B-205ENST00000474252 USP32Q8NFA0 1604 aa24.7■■□□□ 1.54
LIN7B-205ENST00000474252 AHDC1Q5TGY3 1603 aaPredicted RBP24.69■■□□□ 1.54
LIN7B-205ENST00000474252 ST20-MTHFSA0A0A6YYL1 179 aa24.69■■□□□ 1.54
LIN7B-205ENST00000474252 NUTM2FA1L443 756 aa24.69■■□□□ 1.54
LIN7B-205ENST00000474252 ORAI2Q96SN7 254 aa24.69■■□□□ 1.54
LIN7B-205ENST00000474252 CDK19Q9BWU1 502 aa24.69■■□□□ 1.54
LIN7B-205ENST00000474252 TESK2Q96S53 571 aa24.68■■□□□ 1.54
LIN7B-205ENST00000474252 EVC2Q86UK5 1308 aa24.66■■□□□ 1.54
LIN7B-205ENST00000474252 HSPA1LP34931 641 aa24.66■■□□□ 1.54
LIN7B-205ENST00000474252 ESCO1Q5FWF5 840 aa24.66■■□□□ 1.54
LIN7B-205ENST00000474252 NUDT16Q96DE0 195 aaKnown RBP24.64■■□□□ 1.54
LIN7B-205ENST00000474252 KIF1AQ12756 1690 aa24.63■■□□□ 1.53
LIN7B-205ENST00000474252 NHSL1Q5SYE7 1610 aa24.63■■□□□ 1.53
LIN7B-205ENST00000474252 SRPK2P78362 688 aaKnown RBP24.62■■□□□ 1.53
LIN7B-205ENST00000474252 PHF8Q9UPP1 1060 aa24.62■■□□□ 1.53
LIN7B-205ENST00000474252 SLC24A1O60721 1099 aa24.61■■□□□ 1.53
LIN7B-205ENST00000474252 CABP2Q9NPB3 220 aa24.61■■□□□ 1.53
LIN7B-205ENST00000474252 TOPAZ1Q8N9V7 1692 aa24.61■■□□□ 1.53
LIN7B-205ENST00000474252 EIF4G2P78344 907 aaKnown RBP eCLIP24.6■■□□□ 1.53
LIN7B-205ENST00000474252 COL16A1Q07092 1604 aaPredicted RBP24.6■■□□□ 1.53
LIN7B-205ENST00000474252 NPHP3Q7Z494 1330 aa24.6■■□□□ 1.53
LIN7B-205ENST00000474252 CCDC61Q9Y6R9 512 aa24.59■■□□□ 1.53
LIN7B-205ENST00000474252 ATAD2Q6PL18 1390 aa24.58■■□□□ 1.53
LIN7B-205ENST00000474252 PUS7Q96PZ0 661 aaKnown RBP24.58■■□□□ 1.53
LIN7B-205ENST00000474252 SOS2Q07890 1332 aaPredicted RBP24.58■■□□□ 1.52
LIN7B-205ENST00000474252 PXDNQ92626 1479 aa24.58■■□□□ 1.52
LIN7B-205ENST00000474252 HSPA5P11021 654 aaKnown RBP24.57■■□□□ 1.52
LIN7B-205ENST00000474252 DDX17Q92841 729 aaKnown RBP24.57■■□□□ 1.52
LIN7B-205ENST00000474252 DISP3Q9P2K9 1392 aa24.56■■□□□ 1.52
LIN7B-205ENST00000474252 PHLPP1O60346 1717 aa24.56■■□□□ 1.52
LIN7B-205ENST00000474252 ITSN1Q15811 1721 aa24.55■■□□□ 1.52
LIN7B-205ENST00000474252 PPIP5K1Q6PFW1 1433 aa24.55■■□□□ 1.52
LIN7B-205ENST00000474252 PLEKHG3A1L390 1219 aa24.55■■□□□ 1.52
LIN7B-205ENST00000474252 FOXO3O43524 673 aa24.55■■□□□ 1.52
LIN7B-205ENST00000474252 POLR3AO14802 1390 aaPredicted RBP24.54■■□□□ 1.52
LIN7B-205ENST00000474252 TMF1P82094 1093 aa24.54■■□□□ 1.52
LIN7B-205ENST00000474252 PMFBP1Q8TBY8 1022 aa24.54■■□□□ 1.52
LIN7B-205ENST00000474252 RGPD8O14715 1765 aaPredicted RBP24.53■■□□□ 1.52
LIN7B-205ENST00000474252 ZEB1P37275 1124 aaPredicted RBP24.49■■□□□ 1.51
LIN7B-205ENST00000474252 CABP1Q9NZU7 370 aa24.49■■□□□ 1.51
LIN7B-205ENST00000474252 ACEP12821 1306 aa24.49■■□□□ 1.51
LIN7B-205ENST00000474252 JCADQ9P266 1359 aa24.49■■□□□ 1.51
LIN7B-205ENST00000474252 SBNO1A3KN83 1393 aa24.48■■□□□ 1.51
LIN7B-205ENST00000474252 XPCQ01831 940 aaPredicted RBP24.48■■□□□ 1.51
LIN7B-205ENST00000474252 NGDNQ8NEJ9 315 aaKnown RBP24.48■■□□□ 1.51
LIN7B-205ENST00000474252 LRRC59Q96AG4 307 aaKnown RBP24.48■■□□□ 1.51
LIN7B-205ENST00000474252 CDCA8Q53HL2 280 aa24.47■■□□□ 1.51
LIN7B-205ENST00000474252 KRT28Q7Z3Y7 464 aa24.47■■□□□ 1.51
LIN7B-205ENST00000474252 NINLQ9Y2I6 1382 aa24.46■■□□□ 1.51
LIN7B-205ENST00000474252 PNPLA6Q8IY17 1366 aa24.45■■□□□ 1.5
LIN7B-205ENST00000474252 PSME1Q06323 249 aa24.45■■□□□ 1.5
LIN7B-205ENST00000474252 TNS3Q68CZ2 1445 aa24.44■■□□□ 1.5
LIN7B-205ENST00000474252 SPATA31A3Q5VYP0 1347 aa24.44■■□□□ 1.5
LIN7B-205ENST00000474252 CPSF1Q10570 1443 aaKnown RBP24.44■■□□□ 1.5
LIN7B-205ENST00000474252 CD163L1Q9NR16 1453 aa24.43■■□□□ 1.5
LIN7B-205ENST00000474252 SHPRHQ149N8 1683 aa24.43■■□□□ 1.5
LIN7B-205ENST00000474252 BRD4O60885 1362 aaPredicted RBP24.42■■□□□ 1.5
LIN7B-205ENST00000474252 TRPM3Q9HCF6 1732 aaPredicted RBP24.42■■□□□ 1.5
LIN7B-205ENST00000474252 USP6P35125 1406 aa24.42■■□□□ 1.5
LIN7B-205ENST00000474252 SSH2Q76I76 1423 aa24.4■■□□□ 1.5
LIN7B-205ENST00000474252 SLC12A5Q9H2X9 1139 aa24.39■■□□□ 1.49
LIN7B-205ENST00000474252 SPATA31A6Q5VVP1 1343 aa24.38■■□□□ 1.49
LIN7B-205ENST00000474252 TMC1Q8TDI8 760 aa24.38■■□□□ 1.49
LIN7B-205ENST00000474252 ZNF692Q9BU19 519 aaPredicted RBP24.38■■□□□ 1.49
LIN7B-205ENST00000474252 ARHGEF10O15013 1369 aa24.38■■□□□ 1.49
LIN7B-205ENST00000474252 COL22A1Q8NFW1 1626 aaPredicted RBP24.38■■□□□ 1.49
LIN7B-205ENST00000474252 C11orf95C9JLR9 678 aaPredicted RBP24.36■■□□□ 1.49
LIN7B-205ENST00000474252 A0A1W2PP64 1363 aa24.36■■□□□ 1.49
LIN7B-205ENST00000474252 ALS2Q96Q42 1657 aa24.35■■□□□ 1.49
LIN7B-205ENST00000474252 ANKRD36BQ8N2N9 1353 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms