RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 TRIM32Q13049 653 aa8.02□□□□□ -1.13
ECHDC1-213ENST00000474240 MRGPRX2Q96LB1 330 aa8.02□□□□□ -1.13
ECHDC1-213ENST00000474240 FCHSD2O94868 740 aa8.01□□□□□ -1.13
ECHDC1-213ENST00000474240 METTL3Q86U44 580 aaKnown RBP8.01□□□□□ -1.13
ECHDC1-213ENST00000474240 HPS1Q92902 700 aa8.01□□□□□ -1.13
ECHDC1-213ENST00000474240 OATP04181 439 aa8□□□□□ -1.13
ECHDC1-213ENST00000474240 RNF19BQ6ZMZ0 732 aa8□□□□□ -1.13
ECHDC1-213ENST00000474240 KIFC2Q96AC6 838 aa8□□□□□ -1.13
ECHDC1-213ENST00000474240 GMPRP36959 345 aa7.99□□□□□ -1.13
ECHDC1-213ENST00000474240 ATP6V1AP38606 617 aa7.99□□□□□ -1.13
ECHDC1-213ENST00000474240 KCNV2Q8TDN2 545 aa7.99□□□□□ -1.13
ECHDC1-213ENST00000474240 ARHGEF1Q92888 912 aaKnown RBP7.99□□□□□ -1.13
ECHDC1-213ENST00000474240 DDX11L8A8MPP1 907 aa7.98□□□□□ -1.13
ECHDC1-213ENST00000474240 LORP23490 312 aaPredicted RBP7.98□□□□□ -1.13
ECHDC1-213ENST00000474240 ZSCAN1Q8NBB4 408 aa7.98□□□□□ -1.13
ECHDC1-213ENST00000474240 SLC16A10Q8TF71 515 aa7.98□□□□□ -1.13
ECHDC1-213ENST00000474240 FECHP22830 423 aa7.97□□□□□ -1.13
ECHDC1-213ENST00000474240 MSS51Q4VC12 460 aa7.97□□□□□ -1.13
ECHDC1-213ENST00000474240 BRICD5Q6PL45 260 aa7.97□□□□□ -1.13
ECHDC1-213ENST00000474240 NLRP7Q8WX94 980 aa7.97□□□□□ -1.13
ECHDC1-213ENST00000474240 VEGFBP49765 207 aa7.95□□□□□ -1.14
ECHDC1-213ENST00000474240 NXF1Q9UBU9 619 aaKnown RBP7.95□□□□□ -1.14
ECHDC1-213ENST00000474240 SALL2Q9Y467 1007 aaPredicted RBP7.95□□□□□ -1.14
ECHDC1-213ENST00000474240 BMP1P13497 986 aa7.94□□□□□ -1.14
ECHDC1-213ENST00000474240 BCANQ96GW7 911 aa7.94□□□□□ -1.14
ECHDC1-213ENST00000474240 REPIN1Q9BWE0 567 aaKnown RBP7.94□□□□□ -1.14
ECHDC1-213ENST00000474240 DAXXQ9UER7 740 aaPredicted RBP7.94□□□□□ -1.14
ECHDC1-213ENST00000474240 GCGRP47871 477 aa7.93□□□□□ -1.14
ECHDC1-213ENST00000474240 IRF7Q92985 503 aa7.93□□□□□ -1.14
ECHDC1-213ENST00000474240 HIC1Q14526 733 aa7.91□□□□□ -1.14
ECHDC1-213ENST00000474240 ERBB4Q15303 1308 aa7.9□□□□□ -1.14
ECHDC1-213ENST00000474240 MMP16P51512 607 aa7.9□□□□□ -1.14
ECHDC1-213ENST00000474240 SKOR1P84550 965 aa7.9□□□□□ -1.14
ECHDC1-213ENST00000474240 RC3H1Q5TC82 1133 aaKnown RBP7.9□□□□□ -1.14
ECHDC1-213ENST00000474240 H3BM21 787 aa7.89□□□□□ -1.15
ECHDC1-213ENST00000474240 ALDH1A1P00352 501 aa7.89□□□□□ -1.15
ECHDC1-213ENST00000474240 SUZ12Q15022 739 aaKnown RBP7.89□□□□□ -1.15
ECHDC1-213ENST00000474240 TRIM46Q7Z4K8 759 aa7.89□□□□□ -1.15
ECHDC1-213ENST00000474240 CCDC24Q8N4L8 307 aa7.89□□□□□ -1.15
ECHDC1-213ENST00000474240 SULF1Q8IWU6 871 aa7.88□□□□□ -1.15
ECHDC1-213ENST00000474240 TULP1O00294 542 aaPredicted RBP7.87□□□□□ -1.15
ECHDC1-213ENST00000474240 SEMA3EO15041 775 aa7.87□□□□□ -1.15
ECHDC1-213ENST00000474240 DXOO77932 396 aaKnown RBP7.87□□□□□ -1.15
ECHDC1-213ENST00000474240 WNT7BP56706 349 aa7.86□□□□□ -1.15
ECHDC1-213ENST00000474240 Q3C1V9 767 aa7.86□□□□□ -1.15
ECHDC1-213ENST00000474240 NPAS3Q8IXF0 933 aa7.86□□□□□ -1.15
ECHDC1-213ENST00000474240 CAPN5O15484 640 aaPredicted RBP7.85□□□□□ -1.15
ECHDC1-213ENST00000474240 GRIPAP1Q4V328 841 aa7.85□□□□□ -1.15
ECHDC1-213ENST00000474240 GNPATO15228 680 aa7.84□□□□□ -1.15
ECHDC1-213ENST00000474240 PHOX2BQ99453 314 aa7.84□□□□□ -1.15
ECHDC1-213ENST00000474240 USB1Q9BQ65 265 aaKnown RBP7.84□□□□□ -1.15
ECHDC1-213ENST00000474240 RBM26Q5T8P6 1007 aaKnown RBP7.83□□□□□ -1.16
ECHDC1-213ENST00000474240 GPR37O15354 613 aa7.82□□□□□ -1.16
ECHDC1-213ENST00000474240 SMYD5Q6GMV2 418 aa7.82□□□□□ -1.16
ECHDC1-213ENST00000474240 HLA-CQ95604 372 aa7.81□□□□□ -1.16
ECHDC1-213ENST00000474240 WASF2Q9Y6W5 498 aa7.81□□□□□ -1.16
ECHDC1-213ENST00000474240 KCTD17Q8N5Z5 321 aa7.8□□□□□ -1.16
ECHDC1-213ENST00000474240 EHBP1Q8NDI1 1231 aa7.8□□□□□ -1.16
ECHDC1-213ENST00000474240 ZFP42Q96MM3 310 aa7.8□□□□□ -1.16
ECHDC1-213ENST00000474240 SIAH2O43255 324 aa7.78□□□□□ -1.16
ECHDC1-213ENST00000474240 SOBPA7XYQ1 873 aa7.76□□□□□ -1.17
ECHDC1-213ENST00000474240 CD46P15529 392 aa7.76□□□□□ -1.17
ECHDC1-213ENST00000474240 TESPA1A2RU30 521 aaPredicted RBP7.75□□□□□ -1.17
ECHDC1-213ENST00000474240 KDM4AO75164 1064 aa7.75□□□□□ -1.17
ECHDC1-213ENST00000474240 JUNDP17535 347 aa7.75□□□□□ -1.17
ECHDC1-213ENST00000474240 TLL2Q9Y6L7 1015 aa7.75□□□□□ -1.17
ECHDC1-213ENST00000474240 GSK3AP49840 483 aa7.74□□□□□ -1.17
ECHDC1-213ENST00000474240 GUCA2AQ02747 115 aa7.74□□□□□ -1.17
ECHDC1-213ENST00000474240 PTCRAQ6ISU1 281 aaPredicted RBP7.74□□□□□ -1.17
ECHDC1-213ENST00000474240 VSIG8P0DPA2 414 aa7.73□□□□□ -1.17
ECHDC1-213ENST00000474240 KCNMA1Q12791 1236 aa7.73□□□□□ -1.17
ECHDC1-213ENST00000474240 NUDT12Q9BQG2 462 aa7.73□□□□□ -1.17
ECHDC1-213ENST00000474240 MRPL14Q6P1L8 145 aaKnown RBP7.72□□□□□ -1.17
ECHDC1-213ENST00000474240 SYMPKQ92797 1274 aaKnown RBP7.72□□□□□ -1.17
ECHDC1-213ENST00000474240 PURBQ96QR8 312 aaKnown RBP7.72□□□□□ -1.17
ECHDC1-213ENST00000474240 HOXA2O43364 376 aa7.71□□□□□ -1.18
ECHDC1-213ENST00000474240 SH3BP2P78314 561 aa7.71□□□□□ -1.18
ECHDC1-213ENST00000474240 NNTQ13423 1086 aa7.7□□□□□ -1.18
ECHDC1-213ENST00000474240 LINC01559Q495D7 138 aa7.7□□□□□ -1.18
ECHDC1-213ENST00000474240 USP46P62068 366 aa7.69□□□□□ -1.18
ECHDC1-213ENST00000474240 SCARF1Q14162 830 aa7.69□□□□□ -1.18
ECHDC1-213ENST00000474240 TMEM151AQ8N4L1 468 aa7.69□□□□□ -1.18
ECHDC1-213ENST00000474240 GDF11O95390 407 aa7.67□□□□□ -1.18
ECHDC1-213ENST00000474240 TIMP2P16035 220 aa7.67□□□□□ -1.18
ECHDC1-213ENST00000474240 ADH1CP00326 375 aa7.66□□□□□ -1.18
ECHDC1-213ENST00000474240 WDR4P57081 412 aaKnown RBP7.66□□□□□ -1.18
ECHDC1-213ENST00000474240 RASSF7Q02833 373 aa7.66□□□□□ -1.18
ECHDC1-213ENST00000474240 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.66□□□□□ -1.18
ECHDC1-213ENST00000474240 CCNYL3P0C7X3 344 aa7.65□□□□□ -1.18
ECHDC1-213ENST00000474240 MDM2Q00987 491 aaPredicted RBP7.65□□□□□ -1.18
ECHDC1-213ENST00000474240 RETREG3Q86VR2 466 aa7.65□□□□□ -1.18
ECHDC1-213ENST00000474240 GPIHBP1Q8IV16 184 aa7.65□□□□□ -1.18
ECHDC1-213ENST00000474240 MAN1A2O60476 641 aa7.64□□□□□ -1.19
ECHDC1-213ENST00000474240 UNC93B1Q9H1C4 597 aa7.64□□□□□ -1.19
ECHDC1-213ENST00000474240 PPFIA3O75145 1194 aa7.63□□□□□ -1.19
ECHDC1-213ENST00000474240 MS4A1P11836 297 aa7.63□□□□□ -1.19
ECHDC1-213ENST00000474240 C6orf118Q5T5N4 469 aa7.63□□□□□ -1.19
ECHDC1-213ENST00000474240 BAP1Q92560 729 aa7.63□□□□□ -1.19
ECHDC1-213ENST00000474240 PLEKHG3A1L390 1219 aa7.62□□□□□ -1.19
ECHDC1-213ENST00000474240 RNF225M0QZC1 329 aaPredicted RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms