RNA–Protein interactions for RNA: ENST00000474100.1

PSMB4-203, Transcript of proteasome subunit beta 4, humanhuman

TSL 5

Gene PSMB4, Length 755 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-203ENST00000474100 POTEIP0CG38 1075 aa11.14□□□□□ -0.63
PSMB4-203ENST00000474100 DCCP43146 1447 aa11.13□□□□□ -0.63
PSMB4-203ENST00000474100 USP21Q9UK80 565 aa11.13□□□□□ -0.63
PSMB4-203ENST00000474100 PNPLA6Q8IY17 1366 aa11.13□□□□□ -0.63
PSMB4-203ENST00000474100 GCC2Q8IWJ2 1684 aa11.12□□□□□ -0.63
PSMB4-203ENST00000474100 TRPC5Q9UL62 973 aaPredicted RBP11.12□□□□□ -0.63
PSMB4-203ENST00000474100 TRPM2O94759 1503 aa11.12□□□□□ -0.63
PSMB4-203ENST00000474100 TMEM131LA2VDJ0 1609 aa11.12□□□□□ -0.63
PSMB4-203ENST00000474100 MST1RQ04912 1400 aa11.11□□□□□ -0.63
PSMB4-203ENST00000474100 PTPRUQ92729 1446 aa11.11□□□□□ -0.63
PSMB4-203ENST00000474100 ANKRD50Q9ULJ7 1429 aa11.1□□□□□ -0.63
PSMB4-203ENST00000474100 FAM50AQ14320 339 aaKnown RBP11.1□□□□□ -0.63
PSMB4-203ENST00000474100 PCDH10Q9P2E7 1040 aa11.1□□□□□ -0.63
PSMB4-203ENST00000474100 MYO5BQ9ULV0 1848 aa11.09□□□□□ -0.63
PSMB4-203ENST00000474100 POTEGQ6S5H5 508 aa11.09□□□□□ -0.63
PSMB4-203ENST00000474100 SETBP1Q9Y6X0 1596 aa11.08□□□□□ -0.64
PSMB4-203ENST00000474100 ADGRL2O95490 1459 aa11.07□□□□□ -0.64
PSMB4-203ENST00000474100 NHSL1Q5SYE7 1610 aa11.07□□□□□ -0.64
PSMB4-203ENST00000474100 ZNF326Q5BKZ1 582 aaKnown RBP11.07□□□□□ -0.64
PSMB4-203ENST00000474100 CCDC125Q86Z20 511 aa11.07□□□□□ -0.64
PSMB4-203ENST00000474100 FNBP4Q8N3X1 1017 aaPredicted RBP11.05□□□□□ -0.64
PSMB4-203ENST00000474100 ADGRL3Q9HAR2 1447 aa11.05□□□□□ -0.64
PSMB4-203ENST00000474100 METP08581 1390 aa11.04□□□□□ -0.64
PSMB4-203ENST00000474100 UNC13BO14795 1591 aa11.04□□□□□ -0.64
PSMB4-203ENST00000474100 ATRNO75882 1429 aa11.04□□□□□ -0.64
PSMB4-203ENST00000474100 PTCH1Q13635 1447 aa11.04□□□□□ -0.64
PSMB4-203ENST00000474100 ORAI2Q96SN7 254 aa11.03□□□□□ -0.64
PSMB4-203ENST00000474100 C1orf167Q5SNV9 1468 aa11.03□□□□□ -0.64
PSMB4-203ENST00000474100 RRBP1Q9P2E9 1410 aaKnown RBP11.02□□□□□ -0.64
PSMB4-203ENST00000474100 XRN1Q8IZH2 1706 aaKnown RBP11.02□□□□□ -0.65
PSMB4-203ENST00000474100 SF3B2Q13435 895 aaKnown RBP11.02□□□□□ -0.65
PSMB4-203ENST00000474100 SOS2Q07890 1332 aaPredicted RBP11.02□□□□□ -0.65
PSMB4-203ENST00000474100 NUP155O75694 1391 aa11.01□□□□□ -0.65
PSMB4-203ENST00000474100 ITGAEP38570 1179 aa11□□□□□ -0.65
PSMB4-203ENST00000474100 GJD4Q96KN9 370 aaPredicted RBP11□□□□□ -0.65
PSMB4-203ENST00000474100 E9PCH4 1651 aa11□□□□□ -0.65
PSMB4-203ENST00000474100 EP400Q96L91 3159 aa11□□□□□ -0.65
PSMB4-203ENST00000474100 DEFB132Q7Z7B7 95 aa10.99□□□□□ -0.65
PSMB4-203ENST00000474100 BLMP54132 1417 aaPredicted RBP10.99□□□□□ -0.65
PSMB4-203ENST00000474100 NRXN3Q9Y4C0 1643 aa10.98□□□□□ -0.65
PSMB4-203ENST00000474100 ESCO1Q5FWF5 840 aa10.98□□□□□ -0.65
PSMB4-203ENST00000474100 XPCQ01831 940 aaPredicted RBP10.97□□□□□ -0.65
PSMB4-203ENST00000474100 NPHP3Q7Z494 1330 aa10.97□□□□□ -0.65
PSMB4-203ENST00000474100 BCL9LQ86UU0 1499 aa10.97□□□□□ -0.65
PSMB4-203ENST00000474100 NALCNQ8IZF0 1738 aa10.97□□□□□ -0.65
PSMB4-203ENST00000474100 MYOM2P54296 1465 aa10.96□□□□□ -0.65
PSMB4-203ENST00000474100 PSDA5PKW4 1024 aaPredicted RBP10.95□□□□□ -0.66
PSMB4-203ENST00000474100 MYCNP04198 464 aaPredicted RBP10.95□□□□□ -0.66
PSMB4-203ENST00000474100 UNC5CLQ8IV45 518 aa10.95□□□□□ -0.66
PSMB4-203ENST00000474100 OTUD5Q96G74 571 aa10.95□□□□□ -0.66
PSMB4-203ENST00000474100 IQGAP3Q86VI3 1631 aa10.95□□□□□ -0.66
PSMB4-203ENST00000474100 ROBO2Q9HCK4 1378 aa10.94□□□□□ -0.66
PSMB4-203ENST00000474100 FOXO3O43524 673 aa10.94□□□□□ -0.66
PSMB4-203ENST00000474100 CCDC9Q9Y3X0 531 aaKnown RBP10.94□□□□□ -0.66
PSMB4-203ENST00000474100 LAMC1P11047 1609 aa10.94□□□□□ -0.66
PSMB4-203ENST00000474100 RALGAPBQ86X10 1494 aa10.93□□□□□ -0.66
PSMB4-203ENST00000474100 A0A0G2JS52 829 aa10.93□□□□□ -0.66
PSMB4-203ENST00000474100 HAP1P54257 671 aaPredicted RBP10.93□□□□□ -0.66
PSMB4-203ENST00000474100 MYT1Q01538 1121 aa10.93□□□□□ -0.66
PSMB4-203ENST00000474100 SEPT12Q8IYM1 358 aa10.93□□□□□ -0.66
PSMB4-203ENST00000474100 COL22A1Q8NFW1 1626 aaPredicted RBP10.93□□□□□ -0.66
PSMB4-203ENST00000474100 LRPPRCP42704 1394 aaKnown RBP10.92□□□□□ -0.66
PSMB4-203ENST00000474100 ROCK1Q13464 1354 aa10.92□□□□□ -0.66
PSMB4-203ENST00000474100 NUTM2FA1L443 756 aa10.92□□□□□ -0.66
PSMB4-203ENST00000474100 VGFO15240 615 aaPredicted RBP10.91□□□□□ -0.66
PSMB4-203ENST00000474100 PLEKHG5O94827 1062 aa10.91□□□□□ -0.66
PSMB4-203ENST00000474100 BAG6P46379 1132 aa10.91□□□□□ -0.66
PSMB4-203ENST00000474100 HFM1A2PYH4 1435 aa10.91□□□□□ -0.66
PSMB4-203ENST00000474100 NEXMIFQ5QGS0 1516 aa10.9□□□□□ -0.66
PSMB4-203ENST00000474100 PXDNQ92626 1479 aa10.9□□□□□ -0.66
PSMB4-203ENST00000474100 HRCP23327 699 aa10.9□□□□□ -0.66
PSMB4-203ENST00000474100 CLCN6P51797 869 aa10.9□□□□□ -0.66
PSMB4-203ENST00000474100 KRT27Q7Z3Y8 459 aa10.9□□□□□ -0.66
PSMB4-203ENST00000474100 LRP5O75197 1615 aa10.9□□□□□ -0.66
PSMB4-203ENST00000474100 GLI3P10071 1580 aa10.9□□□□□ -0.67
PSMB4-203ENST00000474100 SLIT2O94813 1529 aa10.89□□□□□ -0.67
PSMB4-203ENST00000474100 VPS72Q15906 364 aa10.88□□□□□ -0.67
PSMB4-203ENST00000474100 SPHKAPQ2M3C7 1700 aa10.88□□□□□ -0.67
PSMB4-203ENST00000474100 CLEC11AQ9Y240 323 aa10.88□□□□□ -0.67
PSMB4-203ENST00000474100 SPDYE1Q8NFV5 336 aaPredicted RBP10.87□□□□□ -0.67
PSMB4-203ENST00000474100 DCBLD2Q96PD2 775 aa10.87□□□□□ -0.67
PSMB4-203ENST00000474100 STK26Q9P289 416 aa10.87□□□□□ -0.67
PSMB4-203ENST00000474100 SPATA31A3Q5VYP0 1347 aa10.86□□□□□ -0.67
PSMB4-203ENST00000474100 NAIPQ13075 1403 aa10.86□□□□□ -0.67
PSMB4-203ENST00000474100 TRIM26Q12899 539 aaPredicted RBP10.86□□□□□ -0.67
PSMB4-203ENST00000474100 R3HDM1Q15032 1099 aaKnown RBP10.86□□□□□ -0.67
PSMB4-203ENST00000474100 LMOD2Q6P5Q4 547 aa10.86□□□□□ -0.67
PSMB4-203ENST00000474100 KRT28Q7Z3Y7 464 aa10.86□□□□□ -0.67
PSMB4-203ENST00000474100 CLTCL1P53675 1640 aa10.86□□□□□ -0.67
PSMB4-203ENST00000474100 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.85□□□□□ -0.67
PSMB4-203ENST00000474100 MARF1Q9Y4F3 1742 aaKnown RBP10.85□□□□□ -0.67
PSMB4-203ENST00000474100 EN1Q05925 392 aaPredicted RBP10.85□□□□□ -0.67
PSMB4-203ENST00000474100 CABLES1Q8TDN4 633 aa10.85□□□□□ -0.67
PSMB4-203ENST00000474100 CDC42BPGQ6DT37 1551 aa10.85□□□□□ -0.67
PSMB4-203ENST00000474100 PRAG1Q86YV5 1406 aa10.84□□□□□ -0.67
PSMB4-203ENST00000474100 YY1P25490 414 aa10.84□□□□□ -0.67
PSMB4-203ENST00000474100 FAM98CQ17RN3 349 aaKnown RBP10.84□□□□□ -0.67
PSMB4-203ENST00000474100 WAPLQ7Z5K2 1190 aa10.84□□□□□ -0.67
PSMB4-203ENST00000474100 CCDC144AA2RUR9 1427 aa10.84□□□□□ -0.67
PSMB4-203ENST00000474100 RPGRIP1LQ68CZ1 1315 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms