RNA–Protein interactions for RNA: ENST00000473824.1

UBE2D1-202, Transcript of ubiquitin conjugating enzyme E2 D1, humanhuman

TSL 2

Gene UBE2D1, Length 839 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D1-202ENST00000473824 PLEKHG3A1L390 1219 aa12.22□□□□□ -0.45
UBE2D1-202ENST00000473824 USB1Q9BQ65 265 aaKnown RBP12.22□□□□□ -0.45
UBE2D1-202ENST00000473824 PCDHGC3Q9UN70 934 aa12.22□□□□□ -0.45
UBE2D1-202ENST00000473824 C6orf229H3BNL8 230 aa12.21□□□□□ -0.45
UBE2D1-202ENST00000473824 CLK2P49760 499 aaKnown RBP12.21□□□□□ -0.45
UBE2D1-202ENST00000473824 PPP1R18Q6NYC8 613 aa12.21□□□□□ -0.45
UBE2D1-202ENST00000473824 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.21□□□□□ -0.45
UBE2D1-202ENST00000473824 S1PR4O95977 384 aa12.2□□□□□ -0.46
UBE2D1-202ENST00000473824 MSS51Q4VC12 460 aa12.2□□□□□ -0.46
UBE2D1-202ENST00000473824 SH3D19Q5HYK7 790 aa12.2□□□□□ -0.46
UBE2D1-202ENST00000473824 SPDYE5A6NIY4 337 aa12.19□□□□□ -0.46
UBE2D1-202ENST00000473824 MTMR2Q13614 643 aa12.19□□□□□ -0.46
UBE2D1-202ENST00000473824 TUSC1Q2TAM9 212 aa12.19□□□□□ -0.46
UBE2D1-202ENST00000473824 RETREG3Q86VR2 466 aa12.19□□□□□ -0.46
UBE2D1-202ENST00000473824 IL27Q8NEV9 243 aa12.19□□□□□ -0.46
UBE2D1-202ENST00000473824 SKIV2LQ15477 1246 aaKnown RBP12.18□□□□□ -0.46
UBE2D1-202ENST00000473824 POLR3EQ9NVU0 708 aa12.18□□□□□ -0.46
UBE2D1-202ENST00000473824 PRPF38BQ5VTL8 546 aaKnown RBP12.17□□□□□ -0.46
UBE2D1-202ENST00000473824 FAM160A2Q8N612 972 aaPredicted RBP12.17□□□□□ -0.46
UBE2D1-202ENST00000473824 SYMPKQ92797 1274 aaKnown RBP12.17□□□□□ -0.46
UBE2D1-202ENST00000473824 ZBTB3Q9H5J0 574 aa12.17□□□□□ -0.46
UBE2D1-202ENST00000473824 LIMD1Q9UGP4 676 aa12.17□□□□□ -0.46
UBE2D1-202ENST00000473824 CSPP1Q1MSJ5 1256 aa12.16□□□□□ -0.46
UBE2D1-202ENST00000473824 ATP1B4Q9UN42 357 aaPredicted RBP12.16□□□□□ -0.46
UBE2D1-202ENST00000473824 PCDHB15Q9Y5E8 787 aa12.16□□□□□ -0.46
UBE2D1-202ENST00000473824 GOPCQ9HD26 462 aa12.15□□□□□ -0.46
UBE2D1-202ENST00000473824 RNF223E7ERA6 249 aa12.14□□□□□ -0.47
UBE2D1-202ENST00000473824 ANKLE1Q8NAG6 615 aa12.14□□□□□ -0.47
UBE2D1-202ENST00000473824 RGS20O76081 388 aa12.13□□□□□ -0.47
UBE2D1-202ENST00000473824 HRCP23327 699 aa12.13□□□□□ -0.47
UBE2D1-202ENST00000473824 PRDM9Q9NQV7 894 aa12.13□□□□□ -0.47
UBE2D1-202ENST00000473824 NUTM2BA6NNL0 878 aaPredicted RBP12.12□□□□□ -0.47
UBE2D1-202ENST00000473824 NUTM2EB1AL46 878 aaPredicted RBP12.12□□□□□ -0.47
UBE2D1-202ENST00000473824 NUTM2DQ5VT03 806 aaPredicted RBP12.12□□□□□ -0.47
UBE2D1-202ENST00000473824 NUTM2AQ8IVF1 878 aaPredicted RBP12.12□□□□□ -0.47
UBE2D1-202ENST00000473824 MMP16P51512 607 aa12.11□□□□□ -0.47
UBE2D1-202ENST00000473824 PRR7Q8TB68 274 aa12.11□□□□□ -0.47
UBE2D1-202ENST00000473824 PCMTD1Q96MG8 357 aaPredicted RBP12.11□□□□□ -0.47
UBE2D1-202ENST00000473824 DXOO77932 396 aaKnown RBP12.1□□□□□ -0.47
UBE2D1-202ENST00000473824 JUNDP17535 347 aa12.1□□□□□ -0.47
UBE2D1-202ENST00000473824 CABLES1Q8TDN4 633 aa12.1□□□□□ -0.47
UBE2D1-202ENST00000473824 PPEF1O14829 653 aaPredicted RBP12.09□□□□□ -0.47
UBE2D1-202ENST00000473824 LILRB3O75022 631 aa12.09□□□□□ -0.47
UBE2D1-202ENST00000473824 QPCTQ16769 361 aa12.09□□□□□ -0.47
UBE2D1-202ENST00000473824 DESI1Q6ICB0 168 aa12.08□□□□□ -0.48
UBE2D1-202ENST00000473824 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.08□□□□□ -0.48
UBE2D1-202ENST00000473824 FCF1Q9Y324 198 aaKnown RBP12.08□□□□□ -0.48
UBE2D1-202ENST00000473824 PROCA1Q8NCQ7 364 aaPredicted RBP12.07□□□□□ -0.48
UBE2D1-202ENST00000473824 CFAP99D6REC4 459 aa12.04□□□□□ -0.48
UBE2D1-202ENST00000473824 HELBQ8NG08 1087 aaPredicted RBP12.04□□□□□ -0.48
UBE2D1-202ENST00000473824 PRKD2Q9BZL6 878 aa12.04□□□□□ -0.48
UBE2D1-202ENST00000473824 PTPRNQ16849 979 aa12.03□□□□□ -0.48
UBE2D1-202ENST00000473824 RTL5Q5HYW3 569 aaPredicted RBP12.03□□□□□ -0.48
UBE2D1-202ENST00000473824 TSC1Q92574 1164 aa12.03□□□□□ -0.48
UBE2D1-202ENST00000473824 V9GY48 417 aaPredicted RBP12.03□□□□□ -0.48
UBE2D1-202ENST00000473824 PPP2R2DQ66LE6 453 aa12.02□□□□□ -0.49
UBE2D1-202ENST00000473824 NUDT12Q9BQG2 462 aa12.02□□□□□ -0.49
UBE2D1-202ENST00000473824 CCDC24Q8N4L8 307 aa12.01□□□□□ -0.49
UBE2D1-202ENST00000473824 ZBTB24O43167 697 aaPredicted RBP12□□□□□ -0.49
UBE2D1-202ENST00000473824 CCNYL3P0C7X3 344 aa12□□□□□ -0.49
UBE2D1-202ENST00000473824 SLC19A1P41440 591 aa12□□□□□ -0.49
UBE2D1-202ENST00000473824 PLA2G2CQ5R387 149 aa12□□□□□ -0.49
UBE2D1-202ENST00000473824 LYPD8Q6UX82 237 aa11.98□□□□□ -0.49
UBE2D1-202ENST00000473824 RPIAP49247 311 aa11.97□□□□□ -0.49
UBE2D1-202ENST00000473824 LIAT1Q6ZQX7 453 aa11.96□□□□□ -0.49
UBE2D1-202ENST00000473824 RFC5P40937 340 aa11.95□□□□□ -0.5
UBE2D1-202ENST00000473824 EVA1BQ9NVM1 165 aa11.95□□□□□ -0.5
UBE2D1-202ENST00000473824 CD2BP2O95400 341 aaKnown RBP11.94□□□□□ -0.5
UBE2D1-202ENST00000473824 SPRYD7Q5W111 196 aa11.94□□□□□ -0.5
UBE2D1-202ENST00000473824 FBXO31Q5XUX0 539 aaPredicted RBP11.94□□□□□ -0.5
UBE2D1-202ENST00000473824 EMID1Q96A84 441 aaPredicted RBP11.94□□□□□ -0.5
UBE2D1-202ENST00000473824 AP1G2O75843 785 aa11.93□□□□□ -0.5
UBE2D1-202ENST00000473824 CTHP32929 405 aa11.92□□□□□ -0.5
UBE2D1-202ENST00000473824 KCNH2Q12809 1159 aa11.92□□□□□ -0.5
UBE2D1-202ENST00000473824 TMEM259Q4ZIN3 620 aa11.92□□□□□ -0.5
UBE2D1-202ENST00000473824 PER1O15534 1290 aaPredicted RBP11.91□□□□□ -0.5
UBE2D1-202ENST00000473824 CTDSPL2Q05D32 466 aa11.91□□□□□ -0.5
UBE2D1-202ENST00000473824 TRIM32Q13049 653 aa11.91□□□□□ -0.5
UBE2D1-202ENST00000473824 ZNF598Q86UK7 904 aaKnown RBP11.91□□□□□ -0.5
UBE2D1-202ENST00000473824 TMEM132AQ24JP5 1023 aa11.9□□□□□ -0.5
UBE2D1-202ENST00000473824 F12P00748 615 aaPredicted RBP11.89□□□□□ -0.51
UBE2D1-202ENST00000473824 ZNF697Q5TEC3 545 aa11.89□□□□□ -0.51
UBE2D1-202ENST00000473824 PTCRAQ6ISU1 281 aaPredicted RBP11.88□□□□□ -0.51
UBE2D1-202ENST00000473824 UNC93B1Q9H1C4 597 aa11.88□□□□□ -0.51
UBE2D1-202ENST00000473824 USP17L8P0C7I0 530 aa11.87□□□□□ -0.51
UBE2D1-202ENST00000473824 MAP10Q9P2G4 905 aa11.87□□□□□ -0.51
UBE2D1-202ENST00000473824 WNT7BP56706 349 aa11.84□□□□□ -0.51
UBE2D1-202ENST00000473824 LRRN4Q8WUT4 740 aa11.84□□□□□ -0.51
UBE2D1-202ENST00000473824 BANK1Q8NDB2 785 aa11.83□□□□□ -0.52
UBE2D1-202ENST00000473824 ARMC2Q8NEN0 867 aa11.83□□□□□ -0.52
UBE2D1-202ENST00000473824 IRX2Q9BZI1 471 aaPredicted RBP11.81□□□□□ -0.52
UBE2D1-202ENST00000473824 FOXC1Q12948 553 aa11.79□□□□□ -0.52
UBE2D1-202ENST00000473824 LINC01559Q495D7 138 aa11.79□□□□□ -0.52
UBE2D1-202ENST00000473824 NBPF14Q5TI25 921 aa11.79□□□□□ -0.52
UBE2D1-202ENST00000473824 PNMA1Q8ND90 353 aa11.79□□□□□ -0.52
UBE2D1-202ENST00000473824 BAP1Q92560 729 aa11.79□□□□□ -0.52
UBE2D1-202ENST00000473824 PDZRN3Q9UPQ7 1066 aa11.79□□□□□ -0.52
UBE2D1-202ENST00000473824 WNT7AO00755 349 aa11.78□□□□□ -0.52
UBE2D1-202ENST00000473824 PRR20EP86478 221 aa11.78□□□□□ -0.52
UBE2D1-202ENST00000473824 PRR20CP86479 221 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms