RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 CDC42BPGQ6DT37 1551 aa17.66■□□□□ 0.42
SMPD4-217ENST00000473720 PRAG1Q86YV5 1406 aa17.66■□□□□ 0.42
SMPD4-217ENST00000473720 C8orf37Q96NL8 207 aa17.66■□□□□ 0.42
SMPD4-217ENST00000473720 PIK3C2GO75747 1445 aa17.65■□□□□ 0.42
SMPD4-217ENST00000473720 FMN2Q9NZ56 1722 aa17.65■□□□□ 0.42
SMPD4-217ENST00000473720 ESCO1Q5FWF5 840 aa17.65■□□□□ 0.42
SMPD4-217ENST00000473720 AFF2P51816 1311 aa17.65■□□□□ 0.42
SMPD4-217ENST00000473720 ACIN1Q9UKV3 1341 aaKnown RBP17.64■□□□□ 0.41
SMPD4-217ENST00000473720 PLEKHH1Q9ULM0 1364 aa17.64■□□□□ 0.41
SMPD4-217ENST00000473720 MARF1Q9Y4F3 1742 aaKnown RBP17.64■□□□□ 0.41
SMPD4-217ENST00000473720 ADAMTS2O95450 1211 aa17.63■□□□□ 0.41
SMPD4-217ENST00000473720 LRPPRCP42704 1394 aaKnown RBP17.63■□□□□ 0.41
SMPD4-217ENST00000473720 XPCQ01831 940 aaPredicted RBP17.62■□□□□ 0.41
SMPD4-217ENST00000473720 YTHDC2Q9H6S0 1430 aaKnown RBP17.62■□□□□ 0.41
SMPD4-217ENST00000473720 RXRBP28702 533 aa17.61■□□□□ 0.41
SMPD4-217ENST00000473720 TECPR2O15040 1411 aa17.61■□□□□ 0.41
SMPD4-217ENST00000473720 CFAP70Q5T0N1 1121 aa17.6■□□□□ 0.41
SMPD4-217ENST00000473720 SOS2Q07890 1332 aaPredicted RBP17.6■□□□□ 0.41
SMPD4-217ENST00000473720 COL22A1Q8NFW1 1626 aaPredicted RBP17.59■□□□□ 0.41
SMPD4-217ENST00000473720 MYOM2P54296 1465 aa17.59■□□□□ 0.41
SMPD4-217ENST00000473720 ABCC11Q96J66 1382 aa17.59■□□□□ 0.41
SMPD4-217ENST00000473720 SAFB2Q14151 953 aaKnown RBP eCLIP17.59■□□□□ 0.41
SMPD4-217ENST00000473720 KIF1AQ12756 1690 aa17.58■□□□□ 0.41
SMPD4-217ENST00000473720 FOXO3O43524 673 aa17.58■□□□□ 0.4
SMPD4-217ENST00000473720 NGLY1Q96IV0 654 aa17.58■□□□□ 0.4
SMPD4-217ENST00000473720 KDM2AQ9Y2K7 1162 aa17.58■□□□□ 0.4
SMPD4-217ENST00000473720 DHX57Q6P158 1386 aaKnown RBP17.57■□□□□ 0.4
SMPD4-217ENST00000473720 NPHP3Q7Z494 1330 aa17.57■□□□□ 0.4
SMPD4-217ENST00000473720 C14orf93Q9H972 538 aaKnown RBP17.57■□□□□ 0.4
SMPD4-217ENST00000473720 QTRT2Q9H974 415 aaKnown RBP17.57■□□□□ 0.4
SMPD4-217ENST00000473720 PXDNQ92626 1479 aa17.56■□□□□ 0.4
SMPD4-217ENST00000473720 NRXN1Q9ULB1 1477 aa17.56■□□□□ 0.4
SMPD4-217ENST00000473720 PLEKHG5O94827 1062 aa17.53■□□□□ 0.4
SMPD4-217ENST00000473720 DCAF11Q8TEB1 546 aa17.53■□□□□ 0.4
SMPD4-217ENST00000473720 PRAM1Q96QH2 718 aa17.53■□□□□ 0.4
SMPD4-217ENST00000473720 POGKQ9P215 609 aa17.52■□□□□ 0.4
SMPD4-217ENST00000473720 USP21Q9UK80 565 aa17.51■□□□□ 0.39
SMPD4-217ENST00000473720 TRAK1Q9UPV9 953 aa17.51■□□□□ 0.39
SMPD4-217ENST00000473720 USP32Q8NFA0 1604 aa17.5■□□□□ 0.39
SMPD4-217ENST00000473720 CDK12Q9NYV4 1490 aaPredicted RBP17.5■□□□□ 0.39
SMPD4-217ENST00000473720 RGS12O14924 1447 aa17.49■□□□□ 0.39
SMPD4-217ENST00000473720 RBM6P78332 1123 aaKnown RBP17.49■□□□□ 0.39
SMPD4-217ENST00000473720 UPF1Q92900 1129 aaKnown RBP eCLIP17.49■□□□□ 0.39
SMPD4-217ENST00000473720 ARHGEF28Q8N1W1 1705 aaKnown RBP17.49■□□□□ 0.39
SMPD4-217ENST00000473720 DLC1Q96QB1 1528 aa17.48■□□□□ 0.39
SMPD4-217ENST00000473720 KRT28Q7Z3Y7 464 aa17.48■□□□□ 0.39
SMPD4-217ENST00000473720 SIRT1Q96EB6 747 aa17.48■□□□□ 0.39
SMPD4-217ENST00000473720 HIRIP3Q9BW71 556 aaPredicted RBP17.48■□□□□ 0.39
SMPD4-217ENST00000473720 ADGRB1O14514 1584 aa17.48■□□□□ 0.39
SMPD4-217ENST00000473720 ABCA3Q99758 1704 aa17.47■□□□□ 0.39
SMPD4-217ENST00000473720 LMOD2Q6P5Q4 547 aa17.47■□□□□ 0.39
SMPD4-217ENST00000473720 PHF8Q9UPP1 1060 aa17.47■□□□□ 0.39
SMPD4-217ENST00000473720 PMFBP1Q8TBY8 1022 aa17.46■□□□□ 0.39
SMPD4-217ENST00000473720 MINK1Q8N4C8 1332 aaPredicted RBP17.46■□□□□ 0.38
SMPD4-217ENST00000473720 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.45■□□□□ 0.38
SMPD4-217ENST00000473720 HAP1P54257 671 aaPredicted RBP17.45■□□□□ 0.38
SMPD4-217ENST00000473720 TRPC5Q9UL62 973 aaPredicted RBP17.45■□□□□ 0.38
SMPD4-217ENST00000473720 SPATA31A3Q5VYP0 1347 aa17.45■□□□□ 0.38
SMPD4-217ENST00000473720 ADGRB2O60241 1585 aa17.45■□□□□ 0.38
SMPD4-217ENST00000473720 PLCH1Q4KWH8 1693 aa17.44■□□□□ 0.38
SMPD4-217ENST00000473720 ITSN1Q15811 1721 aa17.44■□□□□ 0.38
SMPD4-217ENST00000473720 BRWD3Q6RI45 1802 aa17.43■□□□□ 0.38
SMPD4-217ENST00000473720 HRCP23327 699 aa17.43■□□□□ 0.38
SMPD4-217ENST00000473720 PSME1Q06323 249 aa17.43■□□□□ 0.38
SMPD4-217ENST00000473720 FNBP4Q8N3X1 1017 aaPredicted RBP17.43■□□□□ 0.38
SMPD4-217ENST00000473720 CABLES1Q8TDN4 633 aa17.42■□□□□ 0.38
SMPD4-217ENST00000473720 TRPM3Q9HCF6 1732 aaPredicted RBP17.41■□□□□ 0.38
SMPD4-217ENST00000473720 ATRNO75882 1429 aa17.41■□□□□ 0.38
SMPD4-217ENST00000473720 TNS3Q68CZ2 1445 aa17.41■□□□□ 0.38
SMPD4-217ENST00000473720 BCL9LQ86UU0 1499 aa17.39■□□□□ 0.37
SMPD4-217ENST00000473720 KIAA1210Q9ULL0 1709 aa17.39■□□□□ 0.37
SMPD4-217ENST00000473720 ALS2Q96Q42 1657 aa17.39■□□□□ 0.37
SMPD4-217ENST00000473720 ANKARQ7Z5J8 1434 aa17.38■□□□□ 0.37
SMPD4-217ENST00000473720 NWD2Q9ULI1 1742 aa17.38■□□□□ 0.37
SMPD4-217ENST00000473720 TULP4Q9NRJ4 1543 aa17.38■□□□□ 0.37
SMPD4-217ENST00000473720 WASLO00401 505 aaPredicted RBP17.36■□□□□ 0.37
SMPD4-217ENST00000473720 STAC3Q96MF2 364 aa17.36■□□□□ 0.37
SMPD4-217ENST00000473720 PRR36Q9H6K5 1346 aa17.36■□□□□ 0.37
SMPD4-217ENST00000473720 GLI3P10071 1580 aa17.36■□□□□ 0.37
SMPD4-217ENST00000473720 GJD4Q96KN9 370 aaPredicted RBP17.35■□□□□ 0.37
SMPD4-217ENST00000473720 SBNO1A3KN83 1393 aa17.35■□□□□ 0.37
SMPD4-217ENST00000473720 EIF3AQ14152 1382 aaKnown RBP17.35■□□□□ 0.37
SMPD4-217ENST00000473720 ATAD2Q6PL18 1390 aa17.35■□□□□ 0.37
SMPD4-217ENST00000473720 ARHGEF10O15013 1369 aa17.34■□□□□ 0.37
SMPD4-217ENST00000473720 PAK3O75914 559 aaPredicted RBP17.34■□□□□ 0.37
SMPD4-217ENST00000473720 SLIT2O94813 1529 aa17.34■□□□□ 0.37
SMPD4-217ENST00000473720 GPRASP1Q5JY77 1395 aa17.34■□□□□ 0.37
SMPD4-217ENST00000473720 UNC5CLQ8IV45 518 aa17.34■□□□□ 0.37
SMPD4-217ENST00000473720 NGDNQ8NEJ9 315 aaKnown RBP17.34■□□□□ 0.37
SMPD4-217ENST00000473720 CCDC9Q9Y3X0 531 aaKnown RBP17.34■□□□□ 0.37
SMPD4-217ENST00000473720 CRYBG1Q9Y4K1 1723 aa17.33■□□□□ 0.37
SMPD4-217ENST00000473720 RALGAPBQ86X10 1494 aa17.32■□□□□ 0.36
SMPD4-217ENST00000473720 QRICH2Q9H0J4 1663 aa17.32■□□□□ 0.36
SMPD4-217ENST00000473720 NRAPQ86VF7 1730 aa17.31■□□□□ 0.36
SMPD4-217ENST00000473720 TOPAZ1Q8N9V7 1692 aa17.31■□□□□ 0.36
SMPD4-217ENST00000473720 NBPF1Q3BBV0 1214 aa17.3■□□□□ 0.36
SMPD4-217ENST00000473720 COL14A1Q05707 1796 aaKnown RBP17.3■□□□□ 0.36
SMPD4-217ENST00000473720 NUDT16Q96DE0 195 aaKnown RBP17.29■□□□□ 0.36
SMPD4-217ENST00000473720 CDK19Q9BWU1 502 aa17.29■□□□□ 0.36
SMPD4-217ENST00000473720 ATP7BP35670 1465 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 514.2 ms