RNA–Protein interactions for RNA: ENST00000473689.5

IMP4-213, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 5

Gene IMP4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-213ENST00000473689 SOS2Q07890 1332 aaPredicted RBP30.54■■■□□ 2.48
IMP4-213ENST00000473689 C14orf93Q9H972 538 aaKnown RBP30.54■■■□□ 2.48
IMP4-213ENST00000473689 PNPLA6Q8IY17 1366 aa30.53■■■□□ 2.48
IMP4-213ENST00000473689 IFT172Q9UG01 1749 aa30.52■■■□□ 2.48
IMP4-213ENST00000473689 HRCP23327 699 aa30.51■■■□□ 2.47
IMP4-213ENST00000473689 SIRT1Q96EB6 747 aa30.5■■■□□ 2.47
IMP4-213ENST00000473689 NRXN1Q9ULB1 1477 aa30.49■■■□□ 2.47
IMP4-213ENST00000473689 LAMC1P11047 1609 aa30.48■■■□□ 2.47
IMP4-213ENST00000473689 PLEKHH1Q9ULM0 1364 aa30.48■■■□□ 2.47
IMP4-213ENST00000473689 YTHDC2Q9H6S0 1430 aaKnown RBP30.47■■■□□ 2.47
IMP4-213ENST00000473689 CFAP70Q5T0N1 1121 aa30.47■■■□□ 2.47
IMP4-213ENST00000473689 ESCO1Q5FWF5 840 aa30.46■■■□□ 2.47
IMP4-213ENST00000473689 CDC42BPGQ6DT37 1551 aa30.45■■■□□ 2.47
IMP4-213ENST00000473689 MYOM2P54296 1465 aa30.44■■■□□ 2.46
IMP4-213ENST00000473689 AFF2P51816 1311 aa30.43■■■□□ 2.46
IMP4-213ENST00000473689 NPHP3Q7Z494 1330 aa30.4■■■□□ 2.46
IMP4-213ENST00000473689 DHX57Q6P158 1386 aaKnown RBP30.4■■■□□ 2.46
IMP4-213ENST00000473689 NUTM2FA1L443 756 aa30.38■■■□□ 2.45
IMP4-213ENST00000473689 FOXO3O43524 673 aa30.38■■■□□ 2.45
IMP4-213ENST00000473689 RXRBP28702 533 aa30.38■■■□□ 2.45
IMP4-213ENST00000473689 C8orf37Q96NL8 207 aa30.38■■■□□ 2.45
IMP4-213ENST00000473689 KNDC1Q76NI1 1749 aa30.36■■■□□ 2.45
IMP4-213ENST00000473689 ADAMTS2O95450 1211 aa30.34■■■□□ 2.45
IMP4-213ENST00000473689 PXDNQ92626 1479 aa30.32■■■□□ 2.44
IMP4-213ENST00000473689 XPCQ01831 940 aaPredicted RBP30.31■■■□□ 2.44
IMP4-213ENST00000473689 NGLY1Q96IV0 654 aa30.31■■■□□ 2.44
IMP4-213ENST00000473689 STAC3Q96MF2 364 aa30.31■■■□□ 2.44
IMP4-213ENST00000473689 PRAM1Q96QH2 718 aa30.31■■■□□ 2.44
IMP4-213ENST00000473689 QTRT2Q9H974 415 aaKnown RBP30.31■■■□□ 2.44
IMP4-213ENST00000473689 DCAF11Q8TEB1 546 aa30.3■■■□□ 2.44
IMP4-213ENST00000473689 CDK12Q9NYV4 1490 aaPredicted RBP30.28■■■□□ 2.44
IMP4-213ENST00000473689 KDM2AQ9Y2K7 1162 aa30.28■■■□□ 2.44
IMP4-213ENST00000473689 FNBP4Q8N3X1 1017 aaPredicted RBP30.26■■■□□ 2.43
IMP4-213ENST00000473689 ADGRB1O14514 1584 aa30.25■■■□□ 2.43
IMP4-213ENST00000473689 RBM6P78332 1123 aaKnown RBP30.25■■■□□ 2.43
IMP4-213ENST00000473689 SAFB2Q14151 953 aaKnown RBP eCLIP30.25■■■□□ 2.43
IMP4-213ENST00000473689 DLC1Q96QB1 1528 aa30.24■■■□□ 2.43
IMP4-213ENST00000473689 COL22A1Q8NFW1 1626 aaPredicted RBP30.24■■■□□ 2.43
IMP4-213ENST00000473689 FMN2Q9NZ56 1722 aa30.23■■■□□ 2.43
IMP4-213ENST00000473689 POGKQ9P215 609 aa30.23■■■□□ 2.43
IMP4-213ENST00000473689 UPF1Q92900 1129 aaKnown RBP eCLIP30.22■■■□□ 2.43
IMP4-213ENST00000473689 SPATA31A3Q5VYP0 1347 aa30.22■■■□□ 2.43
IMP4-213ENST00000473689 KRT28Q7Z3Y7 464 aa30.21■■■□□ 2.43
IMP4-213ENST00000473689 USP21Q9UK80 565 aa30.21■■■□□ 2.43
IMP4-213ENST00000473689 PHF8Q9UPP1 1060 aa30.21■■■□□ 2.43
IMP4-213ENST00000473689 TRAK1Q9UPV9 953 aa30.21■■■□□ 2.43
IMP4-213ENST00000473689 TRPC5Q9UL62 973 aaPredicted RBP30.16■■■□□ 2.42
IMP4-213ENST00000473689 RGS12O14924 1447 aa30.14■■■□□ 2.42
IMP4-213ENST00000473689 PSME1Q06323 249 aa30.13■■■□□ 2.41
IMP4-213ENST00000473689 KIF1AQ12756 1690 aa30.13■■■□□ 2.41
IMP4-213ENST00000473689 ANKARQ7Z5J8 1434 aa30.13■■■□□ 2.41
IMP4-213ENST00000473689 HIRIP3Q9BW71 556 aaPredicted RBP30.11■■■□□ 2.41
IMP4-213ENST00000473689 ATRNO75882 1429 aa30.11■■■□□ 2.41
IMP4-213ENST00000473689 BCL9LQ86UU0 1499 aa30.11■■■□□ 2.41
IMP4-213ENST00000473689 MINK1Q8N4C8 1332 aaPredicted RBP30.1■■■□□ 2.41
IMP4-213ENST00000473689 SBNO1A3KN83 1393 aa30.09■■■□□ 2.41
IMP4-213ENST00000473689 ADGRB2O60241 1585 aa30.09■■■□□ 2.41
IMP4-213ENST00000473689 WASLO00401 505 aaPredicted RBP30.08■■■□□ 2.41
IMP4-213ENST00000473689 PMFBP1Q8TBY8 1022 aa30.08■■■□□ 2.41
IMP4-213ENST00000473689 PRR36Q9H6K5 1346 aa30.07■■■□□ 2.4
IMP4-213ENST00000473689 TNS3Q68CZ2 1445 aa30.06■■■□□ 2.4
IMP4-213ENST00000473689 USP32Q8NFA0 1604 aa30.04■■■□□ 2.4
IMP4-213ENST00000473689 RGPD8O14715 1765 aaPredicted RBP30.03■■■□□ 2.4
IMP4-213ENST00000473689 EIF3AQ14152 1382 aaKnown RBP30.03■■■□□ 2.4
IMP4-213ENST00000473689 CABLES1Q8TDN4 633 aa30.02■■■□□ 2.4
IMP4-213ENST00000473689 GJD4Q96KN9 370 aaPredicted RBP30.01■■■□□ 2.39
IMP4-213ENST00000473689 SLIT2O94813 1529 aa30.01■■■□□ 2.39
IMP4-213ENST00000473689 UNC5CLQ8IV45 518 aa30■■■□□ 2.39
IMP4-213ENST00000473689 ARHGEF10O15013 1369 aa30■■■□□ 2.39
IMP4-213ENST00000473689 TULP4Q9NRJ4 1543 aa29.98■■■□□ 2.39
IMP4-213ENST00000473689 LMOD2Q6P5Q4 547 aa29.98■■■□□ 2.39
IMP4-213ENST00000473689 NBPF1Q3BBV0 1214 aa29.96■■■□□ 2.39
IMP4-213ENST00000473689 HAP1P54257 671 aaPredicted RBP29.95■■■□□ 2.39
IMP4-213ENST00000473689 MARF1Q9Y4F3 1742 aaKnown RBP29.95■■■□□ 2.38
IMP4-213ENST00000473689 GPRASP1Q5JY77 1395 aa29.94■■■□□ 2.38
IMP4-213ENST00000473689 NUDT16Q96DE0 195 aaKnown RBP29.93■■■□□ 2.38
IMP4-213ENST00000473689 ATAD2Q6PL18 1390 aa29.91■■■□□ 2.38
IMP4-213ENST00000473689 PLEKHG5O94827 1062 aa29.91■■■□□ 2.38
IMP4-213ENST00000473689 NGDNQ8NEJ9 315 aaKnown RBP29.91■■■□□ 2.38
IMP4-213ENST00000473689 CDK19Q9BWU1 502 aa29.91■■■□□ 2.38
IMP4-213ENST00000473689 FAM83GA6ND36 823 aa29.9■■■□□ 2.38
IMP4-213ENST00000473689 ARHGEF28Q8N1W1 1705 aaKnown RBP29.88■■■□□ 2.37
IMP4-213ENST00000473689 ATP7BP35670 1465 aa29.87■■■□□ 2.37
IMP4-213ENST00000473689 RALGAPBQ86X10 1494 aa29.87■■■□□ 2.37
IMP4-213ENST00000473689 VPS72Q15906 364 aa29.87■■■□□ 2.37
IMP4-213ENST00000473689 KIAA1210Q9ULL0 1709 aa29.86■■■□□ 2.37
IMP4-213ENST00000473689 L3MBTL2Q969R5 705 aa29.86■■■□□ 2.37
IMP4-213ENST00000473689 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.85■■■□□ 2.37
IMP4-213ENST00000473689 TRPM3Q9HCF6 1732 aaPredicted RBP29.85■■■□□ 2.37
IMP4-213ENST00000473689 SIN3AQ96ST3 1273 aa29.84■■■□□ 2.37
IMP4-213ENST00000473689 CCDC61Q9Y6R9 512 aa29.84■■■□□ 2.37
IMP4-213ENST00000473689 GLI3P10071 1580 aa29.82■■■□□ 2.36
IMP4-213ENST00000473689 ONECUT3O60422 494 aaPredicted RBP29.82■■■□□ 2.36
IMP4-213ENST00000473689 PLEKHG3A1L390 1219 aa29.81■■■□□ 2.36
IMP4-213ENST00000473689 PAK3O75914 559 aaPredicted RBP29.81■■■□□ 2.36
IMP4-213ENST00000473689 ALS2Q96Q42 1657 aa29.8■■■□□ 2.36
IMP4-213ENST00000473689 POLR3AO14802 1390 aaPredicted RBP29.79■■■□□ 2.36
IMP4-213ENST00000473689 ACEP12821 1306 aa29.78■■■□□ 2.36
IMP4-213ENST00000473689 NBPF8Q3BBV2 869 aa29.78■■■□□ 2.36
IMP4-213ENST00000473689 ABCA3Q99758 1704 aa29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms