RNA–Protein interactions for RNA: ENST00000473339.1

PTK7-211, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 3

Gene PTK7, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-211ENST00000473339 ADGRB1O14514 1584 aa23.78■■□□□ 1.4
PTK7-211ENST00000473339 LRP6O75581 1613 aa23.78■■□□□ 1.4
PTK7-211ENST00000473339 PHF23Q9BUL5 403 aaPredicted RBP23.77■■□□□ 1.4
PTK7-211ENST00000473339 CDC42BPGQ6DT37 1551 aa23.77■■□□□ 1.4
PTK7-211ENST00000473339 LAMC1P11047 1609 aa23.77■■□□□ 1.4
PTK7-211ENST00000473339 DCAF11Q8TEB1 546 aa23.76■■□□□ 1.39
PTK7-211ENST00000473339 SPATA31A6Q5VVP1 1343 aa23.74■■□□□ 1.39
PTK7-211ENST00000473339 SHPRHQ149N8 1683 aa23.73■■□□□ 1.39
PTK7-211ENST00000473339 STAC3Q96MF2 364 aa23.73■■□□□ 1.39
PTK7-211ENST00000473339 KDM2AQ9Y2K7 1162 aa23.73■■□□□ 1.39
PTK7-211ENST00000473339 POTEAQ6S8J7 498 aa23.72■■□□□ 1.39
PTK7-211ENST00000473339 SOS2Q07890 1332 aaPredicted RBP23.72■■□□□ 1.39
PTK7-211ENST00000473339 LRRC59Q96AG4 307 aaKnown RBP23.69■■□□□ 1.38
PTK7-211ENST00000473339 DLC1Q96QB1 1528 aa23.69■■□□□ 1.38
PTK7-211ENST00000473339 PNPLA6Q8IY17 1366 aa23.68■■□□□ 1.38
PTK7-211ENST00000473339 PRAM1Q96QH2 718 aa23.68■■□□□ 1.38
PTK7-211ENST00000473339 ESCO1Q5FWF5 840 aa23.65■■□□□ 1.38
PTK7-211ENST00000473339 NUTM2FA1L443 756 aa23.64■■□□□ 1.37
PTK7-211ENST00000473339 PXDNQ92626 1479 aa23.63■■□□□ 1.37
PTK7-211ENST00000473339 FMN2Q9NZ56 1722 aa23.63■■□□□ 1.37
PTK7-211ENST00000473339 TRAK1Q9UPV9 953 aa23.62■■□□□ 1.37
PTK7-211ENST00000473339 SAFB2Q14151 953 aaKnown RBP eCLIP23.61■■□□□ 1.37
PTK7-211ENST00000473339 FOXO3O43524 673 aa23.6■■□□□ 1.37
PTK7-211ENST00000473339 NUTM2BA6NNL0 878 aaPredicted RBP23.59■■□□□ 1.37
PTK7-211ENST00000473339 NUTM2EB1AL46 878 aaPredicted RBP23.59■■□□□ 1.37
PTK7-211ENST00000473339 NUTM2AQ8IVF1 878 aaPredicted RBP23.59■■□□□ 1.37
PTK7-211ENST00000473339 SIN3AQ96ST3 1273 aa23.59■■□□□ 1.37
PTK7-211ENST00000473339 NPHP3Q7Z494 1330 aa23.59■■□□□ 1.37
PTK7-211ENST00000473339 ADGRB2O60241 1585 aa23.57■■□□□ 1.36
PTK7-211ENST00000473339 XPCQ01831 940 aaPredicted RBP23.56■■□□□ 1.36
PTK7-211ENST00000473339 NBPF1Q3BBV0 1214 aa23.56■■□□□ 1.36
PTK7-211ENST00000473339 POGKQ9P215 609 aa23.56■■□□□ 1.36
PTK7-211ENST00000473339 L3MBTL2Q969R5 705 aa23.55■■□□□ 1.36
PTK7-211ENST00000473339 USP32Q8NFA0 1604 aa23.55■■□□□ 1.36
PTK7-211ENST00000473339 HIRIP3Q9BW71 556 aaPredicted RBP23.53■■□□□ 1.36
PTK7-211ENST00000473339 PRR36Q9H6K5 1346 aa23.53■■□□□ 1.36
PTK7-211ENST00000473339 COL22A1Q8NFW1 1626 aaPredicted RBP23.52■■□□□ 1.36
PTK7-211ENST00000473339 MEX3CQ5U5Q3 659 aaKnown RBP23.52■■□□□ 1.36
PTK7-211ENST00000473339 PHF8Q9UPP1 1060 aa23.51■■□□□ 1.35
PTK7-211ENST00000473339 MINK1Q8N4C8 1332 aaPredicted RBP23.51■■□□□ 1.35
PTK7-211ENST00000473339 ANKARQ7Z5J8 1434 aa23.5■■□□□ 1.35
PTK7-211ENST00000473339 KIAA1210Q9ULL0 1709 aa23.5■■□□□ 1.35
PTK7-211ENST00000473339 RGPD8O14715 1765 aaPredicted RBP23.5■■□□□ 1.35
PTK7-211ENST00000473339 ZNF772Q68DY9 489 aaPredicted RBP23.5■■□□□ 1.35
PTK7-211ENST00000473339 ARHGEF28Q8N1W1 1705 aaKnown RBP23.5■■□□□ 1.35
PTK7-211ENST00000473339 WASLO00401 505 aaPredicted RBP23.49■■□□□ 1.35
PTK7-211ENST00000473339 AFF2P51816 1311 aa23.49■■□□□ 1.35
PTK7-211ENST00000473339 SPATA31A3Q5VYP0 1347 aa23.49■■□□□ 1.35
PTK7-211ENST00000473339 KIF1AQ12756 1690 aa23.48■■□□□ 1.35
PTK7-211ENST00000473339 KRT28Q7Z3Y7 464 aa23.48■■□□□ 1.35
PTK7-211ENST00000473339 ADAMTS2O95450 1211 aa23.46■■□□□ 1.35
PTK7-211ENST00000473339 TRIM26Q12899 539 aaPredicted RBP23.46■■□□□ 1.35
PTK7-211ENST00000473339 C8orf37Q96NL8 207 aa23.46■■□□□ 1.35
PTK7-211ENST00000473339 TULP4Q9NRJ4 1543 aa23.44■■□□□ 1.34
PTK7-211ENST00000473339 PMFBP1Q8TBY8 1022 aa23.44■■□□□ 1.34
PTK7-211ENST00000473339 NEUROD1Q13562 356 aa23.43■■□□□ 1.34
PTK7-211ENST00000473339 FNBP4Q8N3X1 1017 aaPredicted RBP23.43■■□□□ 1.34
PTK7-211ENST00000473339 SBNO1A3KN83 1393 aa23.41■■□□□ 1.34
PTK7-211ENST00000473339 ATP7BP35670 1465 aa23.4■■□□□ 1.34
PTK7-211ENST00000473339 TNS3Q68CZ2 1445 aa23.4■■□□□ 1.34
PTK7-211ENST00000473339 NBPF8Q3BBV2 869 aa23.39■■□□□ 1.33
PTK7-211ENST00000473339 NGLY1Q96IV0 654 aa23.39■■□□□ 1.33
PTK7-211ENST00000473339 NUDT16Q96DE0 195 aaKnown RBP23.38■■□□□ 1.33
PTK7-211ENST00000473339 CDK19Q9BWU1 502 aa23.38■■□□□ 1.33
PTK7-211ENST00000473339 QTRT2Q9H974 415 aaKnown RBP23.38■■□□□ 1.33
PTK7-211ENST00000473339 EIF3AQ14152 1382 aaKnown RBP23.38■■□□□ 1.33
PTK7-211ENST00000473339 RXRBP28702 533 aa23.37■■□□□ 1.33
PTK7-211ENST00000473339 BCL9LQ86UU0 1499 aa23.36■■□□□ 1.33
PTK7-211ENST00000473339 PSME1Q06323 249 aa23.36■■□□□ 1.33
PTK7-211ENST00000473339 TRPM3Q9HCF6 1732 aaPredicted RBP23.35■■□□□ 1.33
PTK7-211ENST00000473339 CDK12Q9NYV4 1490 aaPredicted RBP23.35■■□□□ 1.33
PTK7-211ENST00000473339 TRPM1Q7Z4N2 1603 aa23.34■■□□□ 1.33
PTK7-211ENST00000473339 CABLES1Q8TDN4 633 aa23.34■■□□□ 1.33
PTK7-211ENST00000473339 USP21Q9UK80 565 aa23.33■■□□□ 1.33
PTK7-211ENST00000473339 CENPJQ9HC77 1338 aaPredicted RBP23.33■■□□□ 1.32
PTK7-211ENST00000473339 RBM6P78332 1123 aaKnown RBP23.32■■□□□ 1.32
PTK7-211ENST00000473339 ATRNO75882 1429 aa23.32■■□□□ 1.32
PTK7-211ENST00000473339 GPRASP1Q5JY77 1395 aa23.31■■□□□ 1.32
PTK7-211ENST00000473339 SLIT2O94813 1529 aa23.31■■□□□ 1.32
PTK7-211ENST00000473339 POLR3AO14802 1390 aaPredicted RBP23.3■■□□□ 1.32
PTK7-211ENST00000473339 PLEKHG3A1L390 1219 aa23.3■■□□□ 1.32
PTK7-211ENST00000473339 RGS12O14924 1447 aa23.3■■□□□ 1.32
PTK7-211ENST00000473339 ARHGEF10O15013 1369 aa23.29■■□□□ 1.32
PTK7-211ENST00000473339 ALS2Q96Q42 1657 aa23.29■■□□□ 1.32
PTK7-211ENST00000473339 MARF1Q9Y4F3 1742 aaKnown RBP23.29■■□□□ 1.32
PTK7-211ENST00000473339 CCDC61Q9Y6R9 512 aa23.29■■□□□ 1.32
PTK7-211ENST00000473339 TOPAZ1Q8N9V7 1692 aa23.28■■□□□ 1.32
PTK7-211ENST00000473339 NGDNQ8NEJ9 315 aaKnown RBP23.27■■□□□ 1.32
PTK7-211ENST00000473339 TRPC5Q9UL62 973 aaPredicted RBP23.27■■□□□ 1.32
PTK7-211ENST00000473339 ACEP12821 1306 aa23.26■■□□□ 1.31
PTK7-211ENST00000473339 ROCK2O75116 1388 aaKnown RBP23.26■■□□□ 1.31
PTK7-211ENST00000473339 ABCA3Q99758 1704 aa23.25■■□□□ 1.31
PTK7-211ENST00000473339 CABP2Q9NPB3 220 aa23.25■■□□□ 1.31
PTK7-211ENST00000473339 LMOD2Q6P5Q4 547 aa23.24■■□□□ 1.31
PTK7-211ENST00000473339 FAM83GA6ND36 823 aa23.23■■□□□ 1.31
PTK7-211ENST00000473339 UNC5CLQ8IV45 518 aa23.23■■□□□ 1.31
PTK7-211ENST00000473339 QRICH2Q9H0J4 1663 aa23.22■■□□□ 1.31
PTK7-211ENST00000473339 ITSN1Q15811 1721 aa23.22■■□□□ 1.31
PTK7-211ENST00000473339 UPF1Q92900 1129 aaKnown RBP eCLIP23.22■■□□□ 1.311e-6■■■■□ 22.2
PTK7-211ENST00000473339 CRYBG1Q9Y4K1 1723 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms