RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 SOS2Q07890 1332 aaPredicted RBP16.85■□□□□ 0.29
ACTB-209ENST00000473257 RPGRIP1LQ68CZ1 1315 aa16.85■□□□□ 0.29
ACTB-209ENST00000473257 RBM6P78332 1123 aaKnown RBP16.83■□□□□ 0.28
ACTB-209ENST00000473257 ESCO1Q5FWF5 840 aa16.83■□□□□ 0.28
ACTB-209ENST00000473257 CDK12Q9NYV4 1490 aaPredicted RBP16.83■□□□□ 0.28
ACTB-209ENST00000473257 PLEKHH1Q9ULM0 1364 aa16.83■□□□□ 0.28
ACTB-209ENST00000473257 LAMC1P11047 1609 aa16.81■□□□□ 0.28
ACTB-209ENST00000473257 FOXO3O43524 673 aa16.81■□□□□ 0.28
ACTB-209ENST00000473257 PRAG1Q86YV5 1406 aa16.8■□□□□ 0.28
ACTB-209ENST00000473257 MPHOSPH9Q99550 1183 aa16.8■□□□□ 0.28
ACTB-209ENST00000473257 USP21Q9UK80 565 aa16.8■□□□□ 0.28
ACTB-209ENST00000473257 CCDC144AA2RUR9 1427 aa16.79■□□□□ 0.28
ACTB-209ENST00000473257 SPATA31E1Q6ZUB1 1445 aa16.79■□□□□ 0.28
ACTB-209ENST00000473257 EP400Q96L91 3159 aa16.79■□□□□ 0.28
ACTB-209ENST00000473257 PLEKHG5O94827 1062 aa16.78■□□□□ 0.28
ACTB-209ENST00000473257 PXDNQ92626 1479 aa16.78■□□□□ 0.28
ACTB-209ENST00000473257 CDC42BPGQ6DT37 1551 aa16.77■□□□□ 0.28
ACTB-209ENST00000473257 MYOM2P54296 1465 aa16.76■□□□□ 0.27
ACTB-209ENST00000473257 LRPPRCP42704 1394 aaKnown RBP16.76■□□□□ 0.27
ACTB-209ENST00000473257 NPHP3Q7Z494 1330 aa16.75■□□□□ 0.27
ACTB-209ENST00000473257 IFT172Q9UG01 1749 aa16.75■□□□□ 0.27
ACTB-209ENST00000473257 COL22A1Q8NFW1 1626 aaPredicted RBP16.74■□□□□ 0.27
ACTB-209ENST00000473257 FNBP4Q8N3X1 1017 aaPredicted RBP16.74■□□□□ 0.27
ACTB-209ENST00000473257 TRPC5Q9UL62 973 aaPredicted RBP16.74■□□□□ 0.27
ACTB-209ENST00000473257 ATRNO75882 1429 aa16.73■□□□□ 0.27
ACTB-209ENST00000473257 SAFB2Q14151 953 aaKnown RBP eCLIP16.73■□□□□ 0.27
ACTB-209ENST00000473257 TECPR2O15040 1411 aa16.72■□□□□ 0.27
ACTB-209ENST00000473257 PIK3C2GO75747 1445 aa16.72■□□□□ 0.27
ACTB-209ENST00000473257 ABCC11Q96J66 1382 aa16.72■□□□□ 0.27
ACTB-209ENST00000473257 ANKRD30BQ9BXX2 1392 aa16.72■□□□□ 0.27
ACTB-209ENST00000473257 BCL9LQ86UU0 1499 aa16.72■□□□□ 0.27
ACTB-209ENST00000473257 YTHDC2Q9H6S0 1430 aaKnown RBP16.71■□□□□ 0.27
ACTB-209ENST00000473257 CFAP70Q5T0N1 1121 aa16.71■□□□□ 0.27
ACTB-209ENST00000473257 ATAD2Q6PL18 1390 aa16.69■□□□□ 0.26
ACTB-209ENST00000473257 CABLES1Q8TDN4 633 aa16.69■□□□□ 0.26
ACTB-209ENST00000473257 FMN2Q9NZ56 1722 aa16.69■□□□□ 0.26
ACTB-209ENST00000473257 KNDC1Q76NI1 1749 aa16.68■□□□□ 0.26
ACTB-209ENST00000473257 KRT28Q7Z3Y7 464 aa16.68■□□□□ 0.26
ACTB-209ENST00000473257 RGPD8O14715 1765 aaPredicted RBP16.67■□□□□ 0.26
ACTB-209ENST00000473257 C14orf93Q9H972 538 aaKnown RBP16.67■□□□□ 0.26
ACTB-209ENST00000473257 SPATA31A3Q5VYP0 1347 aa16.67■□□□□ 0.26
ACTB-209ENST00000473257 PRAM1Q96QH2 718 aa16.66■□□□□ 0.26
ACTB-209ENST00000473257 MARF1Q9Y4F3 1742 aaKnown RBP16.66■□□□□ 0.26
ACTB-209ENST00000473257 GJD4Q96KN9 370 aaPredicted RBP16.65■□□□□ 0.26
ACTB-209ENST00000473257 LMOD2Q6P5Q4 547 aa16.64■□□□□ 0.25
ACTB-209ENST00000473257 PHF8Q9UPP1 1060 aa16.64■□□□□ 0.25
ACTB-209ENST00000473257 PMFBP1Q8TBY8 1022 aa16.63■□□□□ 0.25
ACTB-209ENST00000473257 HIRIP3Q9BW71 556 aaPredicted RBP16.63■□□□□ 0.25
ACTB-209ENST00000473257 RALGAPBQ86X10 1494 aa16.62■□□□□ 0.25
ACTB-209ENST00000473257 NRXN1Q9ULB1 1477 aa16.62■□□□□ 0.25
ACTB-209ENST00000473257 UNC5CLQ8IV45 518 aa16.62■□□□□ 0.25
ACTB-209ENST00000473257 GLI3P10071 1580 aa16.62■□□□□ 0.25
ACTB-209ENST00000473257 SLIT2O94813 1529 aa16.61■□□□□ 0.25
ACTB-209ENST00000473257 HAP1P54257 671 aaPredicted RBP16.61■□□□□ 0.25
ACTB-209ENST00000473257 KDM2AQ9Y2K7 1162 aa16.61■□□□□ 0.25
ACTB-209ENST00000473257 KIF1AQ12756 1690 aa16.61■□□□□ 0.25
ACTB-209ENST00000473257 DHX57Q6P158 1386 aaKnown RBP16.61■□□□□ 0.25
ACTB-209ENST00000473257 RAB3GAP2Q9H2M9 1393 aa16.61■□□□□ 0.25
ACTB-209ENST00000473257 POGKQ9P215 609 aa16.6■□□□□ 0.25
ACTB-209ENST00000473257 TRAK1Q9UPV9 953 aa16.6■□□□□ 0.25
ACTB-209ENST00000473257 TNS3Q68CZ2 1445 aa16.6■□□□□ 0.25
ACTB-209ENST00000473257 USP32Q8NFA0 1604 aa16.59■□□□□ 0.25
ACTB-209ENST00000473257 SIRT1Q96EB6 747 aa16.59■□□□□ 0.25
ACTB-209ENST00000473257 PSME1Q06323 249 aa16.58■□□□□ 0.24
ACTB-209ENST00000473257 MINK1Q8N4C8 1332 aaPredicted RBP16.58■□□□□ 0.24
ACTB-209ENST00000473257 BRWD3Q6RI45 1802 aa16.57■□□□□ 0.24
ACTB-209ENST00000473257 CCDC9Q9Y3X0 531 aaKnown RBP16.57■□□□□ 0.24
ACTB-209ENST00000473257 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.56■□□□□ 0.24
ACTB-209ENST00000473257 PRR36Q9H6K5 1346 aa16.56■□□□□ 0.24
ACTB-209ENST00000473257 FAM83GA6ND36 823 aa16.56■□□□□ 0.24
ACTB-209ENST00000473257 DEFB132Q7Z7B7 95 aa16.56■□□□□ 0.24
ACTB-209ENST00000473257 SEPT12Q8IYM1 358 aa16.56■□□□□ 0.24
ACTB-209ENST00000473257 ADGRB1O14514 1584 aa16.55■□□□□ 0.24
ACTB-209ENST00000473257 ZRANB1Q9UGI0 708 aa16.55■□□□□ 0.24
ACTB-209ENST00000473257 ABCA3Q99758 1704 aa16.55■□□□□ 0.24
ACTB-209ENST00000473257 PLCH1Q4KWH8 1693 aa16.54■□□□□ 0.24
ACTB-209ENST00000473257 DCAF11Q8TEB1 546 aa16.54■□□□□ 0.24
ACTB-209ENST00000473257 SBNO1A3KN83 1393 aa16.53■□□□□ 0.24
ACTB-209ENST00000473257 VPS72Q15906 364 aa16.53■□□□□ 0.24
ACTB-209ENST00000473257 DLC1Q96QB1 1528 aa16.52■□□□□ 0.24
ACTB-209ENST00000473257 A0A0G2JS52 829 aa16.51■□□□□ 0.23
ACTB-209ENST00000473257 MYT1Q01538 1121 aa16.51■□□□□ 0.23
ACTB-209ENST00000473257 ARHGEF10O15013 1369 aa16.51■□□□□ 0.23
ACTB-209ENST00000473257 FAM182BQ5T319 152 aa16.5■□□□□ 0.23
ACTB-209ENST00000473257 ANKARQ7Z5J8 1434 aa16.5■□□□□ 0.23
ACTB-209ENST00000473257 TRPM3Q9HCF6 1732 aaPredicted RBP16.5■□□□□ 0.23
ACTB-209ENST00000473257 ACIN1Q9UKV3 1341 aaKnown RBP16.49■□□□□ 0.23
ACTB-209ENST00000473257 ADGRB2O60241 1585 aa16.49■□□□□ 0.23
ACTB-209ENST00000473257 BLMP54132 1417 aaPredicted RBP16.49■□□□□ 0.23
ACTB-209ENST00000473257 FAM98CQ17RN3 349 aaKnown RBP16.49■□□□□ 0.23
ACTB-209ENST00000473257 CCDC125Q86Z20 511 aa16.49■□□□□ 0.23
ACTB-209ENST00000473257 BTG4Q9NY30 223 aa16.49■□□□□ 0.23
ACTB-209ENST00000473257 WASLO00401 505 aaPredicted RBP16.48■□□□□ 0.23
ACTB-209ENST00000473257 PAK3O75914 559 aaPredicted RBP16.48■□□□□ 0.23
ACTB-209ENST00000473257 KRT27Q7Z3Y8 459 aa16.47■□□□□ 0.23
ACTB-209ENST00000473257 NWD2Q9ULI1 1742 aa16.47■□□□□ 0.23
ACTB-209ENST00000473257 ONECUT3O60422 494 aaPredicted RBP16.46■□□□□ 0.23
ACTB-209ENST00000473257 NUTM2GQ5VZR2 741 aa16.46■□□□□ 0.23
ACTB-209ENST00000473257 NGDNQ8NEJ9 315 aaKnown RBP16.46■□□□□ 0.23
ACTB-209ENST00000473257 GPRASP1Q5JY77 1395 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms