RNA–Protein interactions for RNA: ENST00000473146.5

SLC6A20-206, Transcript of solute carrier family 6 member 20, humanhuman

TSL 1 (best)

Gene SLC6A20, Length 2,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-206ENST00000473146 PLEKHG1Q9ULL1 1385 aa17.34■□□□□ 0.37
SLC6A20-206ENST00000473146 EID1Q9Y6B2 187 aa17.33■□□□□ 0.37
SLC6A20-206ENST00000473146 PRAM1Q96QH2 718 aa17.33■□□□□ 0.36
SLC6A20-206ENST00000473146 SETD1BQ9UPS6 1966 aaKnown RBP17.33■□□□□ 0.36
SLC6A20-206ENST00000473146 LRPPRCP42704 1394 aaKnown RBP17.33■□□□□ 0.36
SLC6A20-206ENST00000473146 ADAMTS13Q76LX8 1427 aa17.33■□□□□ 0.36
SLC6A20-206ENST00000473146 SMG6Q86US8 1419 aaKnown RBP17.32■□□□□ 0.36
SLC6A20-206ENST00000473146 TULP4Q9NRJ4 1543 aa17.31■□□□□ 0.36
SLC6A20-206ENST00000473146 POGKQ9P215 609 aa17.3■□□□□ 0.36
SLC6A20-206ENST00000473146 ABCC11Q96J66 1382 aa17.3■□□□□ 0.36
SLC6A20-206ENST00000473146 ZNF142P52746 1687 aaPredicted RBP17.3■□□□□ 0.36
SLC6A20-206ENST00000473146 NOP58Q9Y2X3 529 aaKnown RBP17.3■□□□□ 0.36
SLC6A20-206ENST00000473146 DLC1Q96QB1 1528 aa17.3■□□□□ 0.36
SLC6A20-206ENST00000473146 NUDCQ9Y266 331 aa17.29■□□□□ 0.36
SLC6A20-206ENST00000473146 EVC2Q86UK5 1308 aa17.29■□□□□ 0.36
SLC6A20-206ENST00000473146 MED14O60244 1454 aa17.28■□□□□ 0.36
SLC6A20-206ENST00000473146 DEKP35659 375 aaKnown RBP17.28■□□□□ 0.36
SLC6A20-206ENST00000473146 WAPLQ7Z5K2 1190 aa17.28■□□□□ 0.36
SLC6A20-206ENST00000473146 CCDC136Q96JN2 1154 aa17.28■□□□□ 0.36
SLC6A20-206ENST00000473146 SLC26A8Q96RN1 970 aa17.28■□□□□ 0.36
SLC6A20-206ENST00000473146 MINK1Q8N4C8 1332 aaPredicted RBP17.27■□□□□ 0.36
SLC6A20-206ENST00000473146 PLEKHH1Q9ULM0 1364 aa17.26■□□□□ 0.35
SLC6A20-206ENST00000473146 SENP3-EIF4A1A0A087X0R7 540 aa17.26■□□□□ 0.35
SLC6A20-206ENST00000473146 KNDC1Q76NI1 1749 aa17.26■□□□□ 0.35
SLC6A20-206ENST00000473146 TECPR2O15040 1411 aa17.25■□□□□ 0.35
SLC6A20-206ENST00000473146 PAK3O75914 559 aaPredicted RBP17.25■□□□□ 0.35
SLC6A20-206ENST00000473146 NBR1Q14596 966 aa17.25■□□□□ 0.35
SLC6A20-206ENST00000473146 CABP2Q9NPB3 220 aa17.25■□□□□ 0.35
SLC6A20-206ENST00000473146 PUS7Q96PZ0 661 aaKnown RBP17.24■□□□□ 0.35
SLC6A20-206ENST00000473146 KTN1Q86UP2 1357 aaKnown RBP17.24■□□□□ 0.35
SLC6A20-206ENST00000473146 SLC12A5Q9H2X9 1139 aa17.23■□□□□ 0.35
SLC6A20-206ENST00000473146 RALBP1Q15311 655 aa17.23■□□□□ 0.35
SLC6A20-206ENST00000473146 CC2D1BQ5T0F9 858 aaKnown RBP17.23■□□□□ 0.35
SLC6A20-206ENST00000473146 TMC1Q8TDI8 760 aa17.23■□□□□ 0.35
SLC6A20-206ENST00000473146 KNSTRNQ9Y448 316 aa17.23■□□□□ 0.35
SLC6A20-206ENST00000473146 CPS1P31327 1500 aa17.23■□□□□ 0.35
SLC6A20-206ENST00000473146 RNF123Q5XPI4 1314 aa17.23■□□□□ 0.35
SLC6A20-206ENST00000473146 PARD3Q8TEW0 1356 aa17.22■□□□□ 0.35
SLC6A20-206ENST00000473146 TBX22Q9Y458 520 aa17.22■□□□□ 0.35
SLC6A20-206ENST00000473146 SRPK2P78362 688 aaKnown RBP17.22■□□□□ 0.35
SLC6A20-206ENST00000473146 FAM135BQ49AJ0 1406 aa17.22■□□□□ 0.35
SLC6A20-206ENST00000473146 PTPRUQ92729 1446 aa17.21■□□□□ 0.35
SLC6A20-206ENST00000473146 AMER1Q5JTC6 1135 aaPredicted RBP17.21■□□□□ 0.35
SLC6A20-206ENST00000473146 SIRT1Q96EB6 747 aa17.21■□□□□ 0.35
SLC6A20-206ENST00000473146 CARD14Q9BXL6 1004 aa17.21■□□□□ 0.35
SLC6A20-206ENST00000473146 ROBO2Q9HCK4 1378 aa17.21■□□□□ 0.34
SLC6A20-206ENST00000473146 DIP2AQ14689 1571 aa17.2■□□□□ 0.34
SLC6A20-206ENST00000473146 ANKLE2Q86XL3 938 aa17.2■□□□□ 0.34
SLC6A20-206ENST00000473146 ANP32AP39687 249 aaKnown RBP17.2■□□□□ 0.34
SLC6A20-206ENST00000473146 CDK19Q9BWU1 502 aa17.19■□□□□ 0.34
SLC6A20-206ENST00000473146 MYBBP1AQ9BQG0 1328 aaKnown RBP17.19■□□□□ 0.34
SLC6A20-206ENST00000473146 PNISRQ8TF01 805 aaKnown RBP17.19■□□□□ 0.34
SLC6A20-206ENST00000473146 AMOTL2Q9Y2J4 779 aa17.17■□□□□ 0.34
SLC6A20-206ENST00000473146 IPO9Q96P70 1041 aaKnown RBP17.17■□□□□ 0.34
SLC6A20-206ENST00000473146 ATAD2Q6PL18 1390 aa17.17■□□□□ 0.34
SLC6A20-206ENST00000473146 NPC1L1Q9UHC9 1359 aa17.15■□□□□ 0.34
SLC6A20-206ENST00000473146 NINLQ9Y2I6 1382 aa17.15■□□□□ 0.34
SLC6A20-206ENST00000473146 NSD3Q9BZ95 1437 aa17.14■□□□□ 0.33
SLC6A20-206ENST00000473146 ANKRD36BQ8N2N9 1353 aa17.14■□□□□ 0.33
SLC6A20-206ENST00000473146 KDM4FA0A1W2PPD8 638 aa17.14■□□□□ 0.33
SLC6A20-206ENST00000473146 WASLO00401 505 aaPredicted RBP17.14■□□□□ 0.33
SLC6A20-206ENST00000473146 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.14■□□□□ 0.33
SLC6A20-206ENST00000473146 BRD4O60885 1362 aaPredicted RBP17.13■□□□□ 0.33
SLC6A20-206ENST00000473146 XRN1Q8IZH2 1706 aaKnown RBP17.13■□□□□ 0.33
SLC6A20-206ENST00000473146 NLRP13Q86W25 1043 aa17.13■□□□□ 0.33
SLC6A20-206ENST00000473146 ZBTB47Q9UFB7 747 aaPredicted RBP17.13■□□□□ 0.33
SLC6A20-206ENST00000473146 PTCH1Q13635 1447 aa17.12■□□□□ 0.33
SLC6A20-206ENST00000473146 A0A1W2PP64 1363 aa17.12■□□□□ 0.33
SLC6A20-206ENST00000473146 PIK3R4Q99570 1358 aa17.12■□□□□ 0.33
SLC6A20-206ENST00000473146 CD163L1Q9NR16 1453 aa17.11■□□□□ 0.33
SLC6A20-206ENST00000473146 CABP1Q9NZU7 370 aa17.1■□□□□ 0.33
SLC6A20-206ENST00000473146 NPHP4O75161 1426 aaPredicted RBP17.1■□□□□ 0.33
SLC6A20-206ENST00000473146 KCNA6P17658 529 aa17.1■□□□□ 0.33
SLC6A20-206ENST00000473146 ADGRB2O60241 1585 aa17.1■□□□□ 0.33
SLC6A20-206ENST00000473146 NCKAP5LQ9HCH0 1330 aa17.1■□□□□ 0.33
SLC6A20-206ENST00000473146 CHD2O14647 1828 aaKnown RBP17.09■□□□□ 0.33
SLC6A20-206ENST00000473146 USP32Q8NFA0 1604 aa17.09■□□□□ 0.33
SLC6A20-206ENST00000473146 RTL5Q5HYW3 569 aaPredicted RBP17.08■□□□□ 0.33
SLC6A20-206ENST00000473146 TERF2IPQ9NYB0 399 aa17.08■□□□□ 0.33
SLC6A20-206ENST00000473146 PPP2R1AP30153 589 aa17.08■□□□□ 0.32
SLC6A20-206ENST00000473146 NUDT16Q96DE0 195 aaKnown RBP17.07■□□□□ 0.32
SLC6A20-206ENST00000473146 CGNL1Q0VF96 1302 aa17.07■□□□□ 0.32
SLC6A20-206ENST00000473146 RRP1P56182 461 aaKnown RBP17.07■□□□□ 0.32
SLC6A20-206ENST00000473146 ATP7BP35670 1465 aa17.06■□□□□ 0.32
SLC6A20-206ENST00000473146 PRR36Q9H6K5 1346 aa17.06■□□□□ 0.32
SLC6A20-206ENST00000473146 PPIP5K1Q6PFW1 1433 aa17.05■□□□□ 0.32
SLC6A20-206ENST00000473146 EXOC6Q8TAG9 804 aa17.05■□□□□ 0.32
SLC6A20-206ENST00000473146 SALL2Q9Y467 1007 aaPredicted RBP17.05■□□□□ 0.32
SLC6A20-206ENST00000473146 CCDC61Q9Y6R9 512 aa17.05■□□□□ 0.32
SLC6A20-206ENST00000473146 HDGFL2Q7Z4V5 671 aaPredicted RBP17.05■□□□□ 0.32
SLC6A20-206ENST00000473146 NPM2Q86SE8 214 aaKnown RBP17.05■□□□□ 0.32
SLC6A20-206ENST00000473146 RCAN3Q9UKA8 241 aa17.03■□□□□ 0.32
SLC6A20-206ENST00000473146 NUTM2FA1L443 756 aa17.02■□□□□ 0.32
SLC6A20-206ENST00000473146 HSPA2P54652 639 aa17.02■□□□□ 0.32
SLC6A20-206ENST00000473146 CPSF1Q10570 1443 aaKnown RBP17.02■□□□□ 0.31
SLC6A20-206ENST00000473146 MORC1Q86VD1 984 aa17.01■□□□□ 0.31
SLC6A20-206ENST00000473146 NSD2O96028 1365 aa17.01■□□□□ 0.31
SLC6A20-206ENST00000473146 TCERG1O14776 1098 aaKnown RBP17■□□□□ 0.31
SLC6A20-206ENST00000473146 TOPAZ1Q8N9V7 1692 aa17■□□□□ 0.31
SLC6A20-206ENST00000473146 CDC42BPGQ6DT37 1551 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms