RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 ATP10AO60312 1499 aa10.51□□□□□ -0.73
CCDC171-205ENST00000472806 LHX6Q9UPM6 363 aa10.51□□□□□ -0.73
CCDC171-205ENST00000472806 SPAG9O60271 1321 aaKnown RBP10.51□□□□□ -0.73
CCDC171-205ENST00000472806 ABCA9Q8IUA7 1624 aa10.51□□□□□ -0.73
CCDC171-205ENST00000472806 MYT1LQ9UL68 1186 aa10.5□□□□□ -0.73
CCDC171-205ENST00000472806 AXIN2Q9Y2T1 843 aa10.5□□□□□ -0.73
CCDC171-205ENST00000472806 PCDHGA4Q9Y5G9 962 aa10.5□□□□□ -0.73
CCDC171-205ENST00000472806 KDM5CP41229 1560 aa10.5□□□□□ -0.73
CCDC171-205ENST00000472806 EIF2AK4Q9P2K8 1649 aaKnown RBP10.49□□□□□ -0.73
CCDC171-205ENST00000472806 CARD11Q9BXL7 1154 aa10.49□□□□□ -0.73
CCDC171-205ENST00000472806 KIF7Q2M1P5 1343 aa10.49□□□□□ -0.73
CCDC171-205ENST00000472806 NEFLP07196 543 aa10.48□□□□□ -0.73
CCDC171-205ENST00000472806 ZNF326Q5BKZ1 582 aaKnown RBP10.48□□□□□ -0.73
CCDC171-205ENST00000472806 STAC3Q96MF2 364 aa10.48□□□□□ -0.73
CCDC171-205ENST00000472806 KANK1Q14678 1352 aa10.48□□□□□ -0.73
CCDC171-205ENST00000472806 TMC2Q8TDI7 906 aa10.47□□□□□ -0.73
CCDC171-205ENST00000472806 DCAF11Q8TEB1 546 aa10.47□□□□□ -0.73
CCDC171-205ENST00000472806 TRAPPC8Q9Y2L5 1435 aa10.47□□□□□ -0.73
CCDC171-205ENST00000472806 FANCAO15360 1455 aa10.47□□□□□ -0.73
CCDC171-205ENST00000472806 ZFYVE16Q7Z3T8 1539 aa10.47□□□□□ -0.73
CCDC171-205ENST00000472806 CFAP74Q9C0B2 1584 aa10.47□□□□□ -0.73
CCDC171-205ENST00000472806 LAMC1P11047 1609 aa10.47□□□□□ -0.73
CCDC171-205ENST00000472806 PRKRIP1Q9H875 184 aaPredicted RBP10.46□□□□□ -0.73
CCDC171-205ENST00000472806 ASXL2Q76L83 1435 aa10.45□□□□□ -0.74
CCDC171-205ENST00000472806 PRAG1Q86YV5 1406 aa10.45□□□□□ -0.74
CCDC171-205ENST00000472806 KTN1Q86UP2 1357 aaKnown RBP10.45□□□□□ -0.74
CCDC171-205ENST00000472806 INO80Q9ULG1 1556 aaPredicted RBP10.44□□□□□ -0.74
CCDC171-205ENST00000472806 ATP7AQ04656 1500 aa10.44□□□□□ -0.74
CCDC171-205ENST00000472806 ADGRL1O94910 1474 aa10.44□□□□□ -0.74
CCDC171-205ENST00000472806 SLC34A2O95436 690 aa10.44□□□□□ -0.74
CCDC171-205ENST00000472806 LSM11P83369 360 aaKnown RBP eCLIP10.44□□□□□ -0.74
CCDC171-205ENST00000472806 SUPT16HQ9Y5B9 1047 aaKnown RBP10.44□□□□□ -0.74
CCDC171-205ENST00000472806 DEPDC5O75140 1603 aa10.44□□□□□ -0.74
CCDC171-205ENST00000472806 TRPM1Q7Z4N2 1603 aa10.44□□□□□ -0.74
CCDC171-205ENST00000472806 GPRASP1Q5JY77 1395 aa10.43□□□□□ -0.74
CCDC171-205ENST00000472806 C11orf95C9JLR9 678 aaPredicted RBP10.43□□□□□ -0.74
CCDC171-205ENST00000472806 KDM2AQ9Y2K7 1162 aa10.43□□□□□ -0.74
CCDC171-205ENST00000472806 PLA2R1Q13018 1463 aa10.42□□□□□ -0.74
CCDC171-205ENST00000472806 TET3O43151 1660 aa10.42□□□□□ -0.74
CCDC171-205ENST00000472806 TRPM2O94759 1503 aa10.42□□□□□ -0.74
CCDC171-205ENST00000472806 SCAPERQ9BY12 1400 aa10.41□□□□□ -0.74
CCDC171-205ENST00000472806 NEURL4Q96JN8 1562 aa10.41□□□□□ -0.74
CCDC171-205ENST00000472806 HNRNPUQ00839 825 aaKnown RBP eCLIP10.41□□□□□ -0.74
CCDC171-205ENST00000472806 NKX1-1Q15270 411 aaPredicted RBP10.41□□□□□ -0.74
CCDC171-205ENST00000472806 MRS2Q9HD23 443 aa10.41□□□□□ -0.74
CCDC171-205ENST00000472806 A2MP01023 1474 aa10.41□□□□□ -0.74
CCDC171-205ENST00000472806 ZNF518AQ6AHZ1 1483 aa10.41□□□□□ -0.74
CCDC171-205ENST00000472806 BCORL1Q5H9F3 1711 aa10.41□□□□□ -0.74
CCDC171-205ENST00000472806 DHX29Q7Z478 1369 aaKnown RBP10.4□□□□□ -0.74
CCDC171-205ENST00000472806 KDM4FA0A1W2PPD8 638 aa10.4□□□□□ -0.74
CCDC171-205ENST00000472806 CHGAP10645 457 aaKnown RBP10.4□□□□□ -0.74
CCDC171-205ENST00000472806 HS6ST3Q8IZP7 471 aa10.4□□□□□ -0.74
CCDC171-205ENST00000472806 AFAP1Q8N556 730 aa10.4□□□□□ -0.74
CCDC171-205ENST00000472806 PTPRTO14522 1441 aa10.4□□□□□ -0.75
CCDC171-205ENST00000472806 VWDEQ8N2E2 1590 aa10.39□□□□□ -0.75
CCDC171-205ENST00000472806 SPHKAPQ2M3C7 1700 aa10.38□□□□□ -0.75
CCDC171-205ENST00000472806 PRDM15P57071 1507 aaPredicted RBP10.38□□□□□ -0.75
CCDC171-205ENST00000472806 E9PCH4 1651 aa10.38□□□□□ -0.75
CCDC171-205ENST00000472806 ST20-MTHFSA0A0A6YYL1 179 aa10.38□□□□□ -0.75
CCDC171-205ENST00000472806 SLC24A1O60721 1099 aa10.38□□□□□ -0.75
CCDC171-205ENST00000472806 DSG2Q14126 1118 aa10.38□□□□□ -0.75
CCDC171-205ENST00000472806 RALBP1Q15311 655 aa10.38□□□□□ -0.75
CCDC171-205ENST00000472806 PLPP6Q8IY26 295 aa10.38□□□□□ -0.75
CCDC171-205ENST00000472806 POLR3GLQ9BT43 218 aa10.38□□□□□ -0.75
CCDC171-205ENST00000472806 CEP152O94986 1710 aa10.38□□□□□ -0.75
CCDC171-205ENST00000472806 RGL3Q3MIN7 710 aa10.37□□□□□ -0.75
CCDC171-205ENST00000472806 ZBED9Q6R2W3 1325 aa10.36□□□□□ -0.75
CCDC171-205ENST00000472806 WASHC2CQ9Y4E1 1318 aa10.36□□□□□ -0.75
CCDC171-205ENST00000472806 CD109Q6YHK3 1445 aa10.36□□□□□ -0.75
CCDC171-205ENST00000472806 ERICH6BQ5W0A0 696 aa10.36□□□□□ -0.75
CCDC171-205ENST00000472806 LMTK2Q8IWU2 1503 aa10.36□□□□□ -0.75
CCDC171-205ENST00000472806 RNF17Q9BXT8 1623 aaKnown RBP10.36□□□□□ -0.75
CCDC171-205ENST00000472806 KIF3BO15066 747 aa10.35□□□□□ -0.75
CCDC171-205ENST00000472806 TMF1P82094 1093 aa10.35□□□□□ -0.75
CCDC171-205ENST00000472806 FOXK1P85037 733 aa10.35□□□□□ -0.75
CCDC171-205ENST00000472806 CDCA8Q53HL2 280 aa10.35□□□□□ -0.75
CCDC171-205ENST00000472806 PTCD2Q8WV60 388 aaKnown RBP10.35□□□□□ -0.75
CCDC171-205ENST00000472806 NEO1Q92859 1461 aa10.35□□□□□ -0.75
CCDC171-205ENST00000472806 MLH3Q9UHC1 1453 aa10.35□□□□□ -0.75
CCDC171-205ENST00000472806 COL17A1Q9UMD9 1497 aaPredicted RBP10.35□□□□□ -0.75
CCDC171-205ENST00000472806 POGZQ7Z3K3 1410 aa10.34□□□□□ -0.75
CCDC171-205ENST00000472806 PSEN2P49810 448 aa10.34□□□□□ -0.75
CCDC171-205ENST00000472806 FAM9BQ8IZU0 186 aa10.34□□□□□ -0.75
CCDC171-205ENST00000472806 GPHNQ9NQX3 736 aaPredicted RBP10.34□□□□□ -0.75
CCDC171-205ENST00000472806 EIF3AQ14152 1382 aaKnown RBP10.34□□□□□ -0.75
CCDC171-205ENST00000472806 MYBBP1AQ9BQG0 1328 aaKnown RBP10.33□□□□□ -0.76
CCDC171-205ENST00000472806 KIAA1210Q9ULL0 1709 aa10.33□□□□□ -0.76
CCDC171-205ENST00000472806 DMRTA1Q5VZB9 504 aa10.33□□□□□ -0.76
CCDC171-205ENST00000472806 BRD4O60885 1362 aaPredicted RBP10.33□□□□□ -0.76
CCDC171-205ENST00000472806 HECW2Q9P2P5 1572 aa10.33□□□□□ -0.76
CCDC171-205ENST00000472806 KIDINS220Q9ULH0 1771 aa10.33□□□□□ -0.76
CCDC171-205ENST00000472806 MADDQ8WXG6 1647 aa10.33□□□□□ -0.76
CCDC171-205ENST00000472806 EFCAB6Q5THR3 1501 aa10.33□□□□□ -0.76
CCDC171-205ENST00000472806 TMC1Q8TDI8 760 aa10.32□□□□□ -0.76
CCDC171-205ENST00000472806 CLTCL1P53675 1640 aa10.32□□□□□ -0.76
CCDC171-205ENST00000472806 MYOM2P54296 1465 aa10.31□□□□□ -0.76
CCDC171-205ENST00000472806 PBX2P40425 430 aa10.31□□□□□ -0.76
CCDC171-205ENST00000472806 MROH1Q8NDA8 1641 aa10.31□□□□□ -0.76
CCDC171-205ENST00000472806 SCAF11Q99590 1463 aaKnown RBP10.3□□□□□ -0.76
CCDC171-205ENST00000472806 PTGER2P43116 358 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms