RNA–Protein interactions for RNA: ENST00000472737.1

SYP-206, Transcript of synaptophysin, humanhuman

TSL 4

Gene SYP, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-206ENST00000472737 GPRASP1Q5JY77 1395 aa18.04■□□□□ 0.48
SYP-206ENST00000472737 ILDR1Q86SU0 546 aaPredicted RBP18.04■□□□□ 0.48
SYP-206ENST00000472737 RBM33Q96EV2 1170 aaKnown RBP18.04■□□□□ 0.48
SYP-206ENST00000472737 PRAM1Q96QH2 718 aa18.04■□□□□ 0.48
SYP-206ENST00000472737 SCAF1Q9H7N4 1312 aaKnown RBP18.03■□□□□ 0.48
SYP-206ENST00000472737 RALGAPBQ86X10 1494 aa18.03■□□□□ 0.48
SYP-206ENST00000472737 WAPLQ7Z5K2 1190 aa18.03■□□□□ 0.48
SYP-206ENST00000472737 ARHGEF28Q8N1W1 1705 aaKnown RBP18.03■□□□□ 0.48
SYP-206ENST00000472737 PIP4K2BP78356 416 aa18.02■□□□□ 0.48
SYP-206ENST00000472737 NBPF1Q3BBV0 1214 aa18.02■□□□□ 0.48
SYP-206ENST00000472737 ADGRB2O60241 1585 aa18.01■□□□□ 0.47
SYP-206ENST00000472737 CENPJQ9HC77 1338 aaPredicted RBP17.99■□□□□ 0.47
SYP-206ENST00000472737 MST1RQ04912 1400 aa17.99■□□□□ 0.47
SYP-206ENST00000472737 NBPF8Q3BBV2 869 aa17.99■□□□□ 0.47
SYP-206ENST00000472737 CARD11Q9BXL7 1154 aa17.99■□□□□ 0.47
SYP-206ENST00000472737 ROBO1Q9Y6N7 1651 aa17.98■□□□□ 0.47
SYP-206ENST00000472737 PLEKHH1Q9ULM0 1364 aa17.97■□□□□ 0.47
SYP-206ENST00000472737 FMN2Q9NZ56 1722 aa17.97■□□□□ 0.47
SYP-206ENST00000472737 ANKARQ7Z5J8 1434 aa17.97■□□□□ 0.47
SYP-206ENST00000472737 C1orf167Q5SNV9 1468 aa17.96■□□□□ 0.47
SYP-206ENST00000472737 WASLO00401 505 aaPredicted RBP17.94■□□□□ 0.46
SYP-206ENST00000472737 SBNO2Q9Y2G9 1366 aa17.93■□□□□ 0.46
SYP-206ENST00000472737 SAFB2Q14151 953 aaKnown RBP eCLIP17.93■□□□□ 0.46
SYP-206ENST00000472737 BRINP3Q76B58 766 aa17.93■□□□□ 0.46
SYP-206ENST00000472737 AHDC1Q5TGY3 1603 aaPredicted RBP17.93■□□□□ 0.46
SYP-206ENST00000472737 KIF1AQ12756 1690 aa17.93■□□□□ 0.46
SYP-206ENST00000472737 QRICH2Q9H0J4 1663 aa17.92■□□□□ 0.46
SYP-206ENST00000472737 MINK1Q8N4C8 1332 aaPredicted RBP17.92■□□□□ 0.46
SYP-206ENST00000472737 ZEB1P37275 1124 aaPredicted RBP17.91■□□□□ 0.46
SYP-206ENST00000472737 NPHP3Q7Z494 1330 aa17.91■□□□□ 0.46
SYP-206ENST00000472737 EVC2Q86UK5 1308 aa17.91■□□□□ 0.46
SYP-206ENST00000472737 PHLPP1O60346 1717 aa17.9■□□□□ 0.46
SYP-206ENST00000472737 ITSN1Q15811 1721 aa17.9■□□□□ 0.46
SYP-206ENST00000472737 TULP4Q9NRJ4 1543 aa17.9■□□□□ 0.46
SYP-206ENST00000472737 ESCO1Q5FWF5 840 aa17.9■□□□□ 0.46
SYP-206ENST00000472737 HSPA1LP34931 641 aa17.89■□□□□ 0.45
SYP-206ENST00000472737 NHSL1Q5SYE7 1610 aa17.89■□□□□ 0.45
SYP-206ENST00000472737 PUS7Q96PZ0 661 aaKnown RBP17.88■□□□□ 0.45
SYP-206ENST00000472737 LRRC59Q96AG4 307 aaKnown RBP17.87■□□□□ 0.45
SYP-206ENST00000472737 CDK19Q9BWU1 502 aa17.87■□□□□ 0.45
SYP-206ENST00000472737 PSME1Q06323 249 aa17.86■□□□□ 0.45
SYP-206ENST00000472737 HIRIP3Q9BW71 556 aaPredicted RBP17.86■□□□□ 0.45
SYP-206ENST00000472737 PHF8Q9UPP1 1060 aa17.86■□□□□ 0.45
SYP-206ENST00000472737 CCDC61Q9Y6R9 512 aa17.86■□□□□ 0.45
SYP-206ENST00000472737 JCADQ9P266 1359 aa17.85■□□□□ 0.45
SYP-206ENST00000472737 SRPK2P78362 688 aaKnown RBP17.84■□□□□ 0.45
SYP-206ENST00000472737 CDCA8Q53HL2 280 aa17.84■□□□□ 0.45
SYP-206ENST00000472737 NUDT16Q96DE0 195 aaKnown RBP17.84■□□□□ 0.45
SYP-206ENST00000472737 ORAI2Q96SN7 254 aa17.84■□□□□ 0.45
SYP-206ENST00000472737 RGPD8O14715 1765 aaPredicted RBP17.84■□□□□ 0.45
SYP-206ENST00000472737 ATAD2Q6PL18 1390 aa17.83■□□□□ 0.45
SYP-206ENST00000472737 SOS2Q07890 1332 aaPredicted RBP17.83■□□□□ 0.44
SYP-206ENST00000472737 BRD4O60885 1362 aaPredicted RBP17.82■□□□□ 0.44
SYP-206ENST00000472737 USP47Q96K76 1375 aa17.82■□□□□ 0.44
SYP-206ENST00000472737 COL16A1Q07092 1604 aaPredicted RBP17.82■□□□□ 0.44
SYP-206ENST00000472737 ATP7BP35670 1465 aa17.81■□□□□ 0.44
SYP-206ENST00000472737 USP32Q8NFA0 1604 aa17.8■□□□□ 0.44
SYP-206ENST00000472737 SPATA31A6Q5VVP1 1343 aa17.8■□□□□ 0.44
SYP-206ENST00000472737 PLEKHG3A1L390 1219 aa17.8■□□□□ 0.44
SYP-206ENST00000472737 NUTM2FA1L443 756 aa17.8■□□□□ 0.44
SYP-206ENST00000472737 EIF4G2P78344 907 aaKnown RBP eCLIP17.8■□□□□ 0.44
SYP-206ENST00000472737 ST20-MTHFSA0A0A6YYL1 179 aa17.79■□□□□ 0.44
SYP-206ENST00000472737 FOXO3O43524 673 aa17.79■□□□□ 0.44
SYP-206ENST00000472737 TMF1P82094 1093 aa17.79■□□□□ 0.44
SYP-206ENST00000472737 NGDNQ8NEJ9 315 aaKnown RBP17.79■□□□□ 0.44
SYP-206ENST00000472737 SHPRHQ149N8 1683 aa17.79■□□□□ 0.44
SYP-206ENST00000472737 NINLQ9Y2I6 1382 aa17.79■□□□□ 0.44
SYP-206ENST00000472737 TOPAZ1Q8N9V7 1692 aa17.78■□□□□ 0.44
SYP-206ENST00000472737 SBNO1A3KN83 1393 aa17.78■□□□□ 0.44
SYP-206ENST00000472737 ZNF692Q9BU19 519 aaPredicted RBP17.77■□□□□ 0.44
SYP-206ENST00000472737 POLR3AO14802 1390 aaPredicted RBP17.77■□□□□ 0.43
SYP-206ENST00000472737 PRR36Q9H6K5 1346 aa17.76■□□□□ 0.43
SYP-206ENST00000472737 KRT28Q7Z3Y7 464 aa17.76■□□□□ 0.43
SYP-206ENST00000472737 PXDNQ92626 1479 aa17.75■□□□□ 0.43
SYP-206ENST00000472737 PPIP5K1Q6PFW1 1433 aa17.75■□□□□ 0.43
SYP-206ENST00000472737 TESK2Q96S53 571 aa17.75■□□□□ 0.43
SYP-206ENST00000472737 CABP2Q9NPB3 220 aa17.75■□□□□ 0.43
SYP-206ENST00000472737 ARHGEF10O15013 1369 aa17.75■□□□□ 0.43
SYP-206ENST00000472737 PMFBP1Q8TBY8 1022 aa17.73■□□□□ 0.43
SYP-206ENST00000472737 SPATA31A3Q5VYP0 1347 aa17.72■□□□□ 0.43
SYP-206ENST00000472737 ACEP12821 1306 aa17.72■□□□□ 0.43
SYP-206ENST00000472737 COL22A1Q8NFW1 1626 aaPredicted RBP17.71■□□□□ 0.43
SYP-206ENST00000472737 TNS3Q68CZ2 1445 aa17.71■□□□□ 0.43
SYP-206ENST00000472737 PNPLA6Q8IY17 1366 aa17.7■□□□□ 0.42
SYP-206ENST00000472737 TERF2IPQ9NYB0 399 aa17.7■□□□□ 0.42
SYP-206ENST00000472737 CABP1Q9NZU7 370 aa17.7■□□□□ 0.42
SYP-206ENST00000472737 HDGFL2Q7Z4V5 671 aaPredicted RBP17.69■□□□□ 0.42
SYP-206ENST00000472737 DDX17Q92841 729 aaKnown RBP17.68■□□□□ 0.42
SYP-206ENST00000472737 TRPM3Q9HCF6 1732 aaPredicted RBP17.67■□□□□ 0.42
SYP-206ENST00000472737 AKAP12Q02952 1782 aa17.66■□□□□ 0.42
SYP-206ENST00000472737 HSPA5P11021 654 aaKnown RBP17.65■□□□□ 0.42
SYP-206ENST00000472737 TTC21AQ8NDW8 1320 aa17.65■□□□□ 0.42
SYP-206ENST00000472737 MED1Q15648 1581 aaPredicted RBP17.65■□□□□ 0.42
SYP-206ENST00000472737 ALS2Q96Q42 1657 aa17.64■□□□□ 0.42
SYP-206ENST00000472737 USP6P35125 1406 aa17.64■□□□□ 0.42
SYP-206ENST00000472737 CPSF1Q10570 1443 aaKnown RBP17.64■□□□□ 0.42
SYP-206ENST00000472737 PAK3O75914 559 aaPredicted RBP17.64■□□□□ 0.41
SYP-206ENST00000472737 XPCQ01831 940 aaPredicted RBP17.64■□□□□ 0.41
SYP-206ENST00000472737 MEX3CQ5U5Q3 659 aaKnown RBP17.64■□□□□ 0.41
SYP-206ENST00000472737 TMC1Q8TDI8 760 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms