RNA–Protein interactions for RNA: ENST00000472558.6

IFFO1-208, Transcript of intermediate filament family orphan 1, humanhuman

TSL 2

Gene IFFO1, Length 2,571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-208ENST00000472558 IQGAP1P46940 1657 aa17.74■□□□□ 0.43
IFFO1-208ENST00000472558 TRAPPC8Q9Y2L5 1435 aa17.74■□□□□ 0.43
IFFO1-208ENST00000472558 MYH16Q9H6N6 1097 aa17.73■□□□□ 0.43
IFFO1-208ENST00000472558 NEUROD2Q15784 382 aa17.72■□□□□ 0.43
IFFO1-208ENST00000472558 GAS2L3Q86XJ1 694 aa17.72■□□□□ 0.43
IFFO1-208ENST00000472558 C22orf23Q9BZE7 217 aa17.72■□□□□ 0.43
IFFO1-208ENST00000472558 NPC1L1Q9UHC9 1359 aa17.72■□□□□ 0.43
IFFO1-208ENST00000472558 RRP7AQ9Y3A4 280 aaKnown RBP17.72■□□□□ 0.43
IFFO1-208ENST00000472558 MFAP1P55081 439 aaKnown RBP17.71■□□□□ 0.43
IFFO1-208ENST00000472558 ZMYM3Q14202 1370 aa17.71■□□□□ 0.43
IFFO1-208ENST00000472558 CARD14Q9BXL6 1004 aa17.7■□□□□ 0.42
IFFO1-208ENST00000472558 MADDQ8WXG6 1647 aa17.7■□□□□ 0.42
IFFO1-208ENST00000472558 IQGAP3Q86VI3 1631 aa17.69■□□□□ 0.42
IFFO1-208ENST00000472558 FANCAO15360 1455 aa17.69■□□□□ 0.42
IFFO1-208ENST00000472558 ATP10AO60312 1499 aa17.69■□□□□ 0.42
IFFO1-208ENST00000472558 DDIT3P35638 169 aa17.67■□□□□ 0.42
IFFO1-208ENST00000472558 CDCA8Q53HL2 280 aa17.67■□□□□ 0.42
IFFO1-208ENST00000472558 RWDD1Q9H446 243 aaPredicted RBP17.66■□□□□ 0.42
IFFO1-208ENST00000472558 SCAF11Q99590 1463 aaKnown RBP17.66■□□□□ 0.42
IFFO1-208ENST00000472558 CD109Q6YHK3 1445 aa17.65■□□□□ 0.42
IFFO1-208ENST00000472558 FAM69CQ0P6D2 419 aa17.65■□□□□ 0.42
IFFO1-208ENST00000472558 NGEFQ8N5V2 710 aa17.64■□□□□ 0.41
IFFO1-208ENST00000472558 SCAPERQ9BY12 1400 aa17.64■□□□□ 0.41
IFFO1-208ENST00000472558 DDX11L8A8MPP1 907 aa17.64■□□□□ 0.41
IFFO1-208ENST00000472558 RAPGEF3O95398 923 aa17.64■□□□□ 0.41
IFFO1-208ENST00000472558 NCOA3Q9Y6Q9 1424 aa17.64■□□□□ 0.41
IFFO1-208ENST00000472558 TNPO1Q92973 898 aaKnown RBP17.63■□□□□ 0.41
IFFO1-208ENST00000472558 ABCA9Q8IUA7 1624 aa17.63■□□□□ 0.41
IFFO1-208ENST00000472558 SPAG9O60271 1321 aaKnown RBP17.63■□□□□ 0.41
IFFO1-208ENST00000472558 ABCC1P33527 1531 aa17.63■□□□□ 0.41
IFFO1-208ENST00000472558 CEP152O94986 1710 aa17.63■□□□□ 0.41
IFFO1-208ENST00000472558 AAMPQ13685 434 aa17.62■□□□□ 0.41
IFFO1-208ENST00000472558 RSPH4AQ5TD94 716 aa17.62■□□□□ 0.41
IFFO1-208ENST00000472558 TCP11L2Q8N4U5 519 aa17.62■□□□□ 0.41
IFFO1-208ENST00000472558 PHF23Q9BUL5 403 aaPredicted RBP17.62■□□□□ 0.41
IFFO1-208ENST00000472558 ADGRL1O94910 1474 aa17.62■□□□□ 0.41
IFFO1-208ENST00000472558 SHPRHQ149N8 1683 aa17.61■□□□□ 0.41
IFFO1-208ENST00000472558 POLR3AO14802 1390 aaPredicted RBP17.61■□□□□ 0.41
IFFO1-208ENST00000472558 MVPQ14764 893 aaKnown RBP17.61■□□□□ 0.41
IFFO1-208ENST00000472558 HSCBQ8IWL3 235 aa17.61■□□□□ 0.41
IFFO1-208ENST00000472558 TRIM44Q96DX7 344 aaPredicted RBP17.61■□□□□ 0.41
IFFO1-208ENST00000472558 KDM5AP29375 1690 aaKnown RBP17.6■□□□□ 0.41
IFFO1-208ENST00000472558 ISY1Q9ULR0 285 aaKnown RBP17.59■□□□□ 0.41
IFFO1-208ENST00000472558 MAST1Q9Y2H9 1570 aa17.59■□□□□ 0.41
IFFO1-208ENST00000472558 TNNT2P45379 298 aaPredicted RBP17.59■□□□□ 0.41
IFFO1-208ENST00000472558 IQSEC2Q5JU85 1478 aa17.59■□□□□ 0.41
IFFO1-208ENST00000472558 ERVK-7P63135 1459 aa17.58■□□□□ 0.41
IFFO1-208ENST00000472558 RUNDC1Q96C34 613 aa17.58■□□□□ 0.4
IFFO1-208ENST00000472558 SPHKAPQ2M3C7 1700 aa17.57■□□□□ 0.4
IFFO1-208ENST00000472558 KIAA1211Q6ZU35 1233 aa17.57■□□□□ 0.4
IFFO1-208ENST00000472558 TPM2P07951 284 aa17.56■□□□□ 0.4
IFFO1-208ENST00000472558 CD2BP2O95400 341 aaKnown RBP17.55■□□□□ 0.4
IFFO1-208ENST00000472558 WDR63Q8IWG1 891 aa17.55■□□□□ 0.4
IFFO1-208ENST00000472558 SMC5Q8IY18 1101 aa17.55■□□□□ 0.4
IFFO1-208ENST00000472558 RAB3GAP1Q15042 981 aa17.55■□□□□ 0.4
IFFO1-208ENST00000472558 PDCL3Q9H2J4 239 aa17.55■□□□□ 0.4
IFFO1-208ENST00000472558 TSPOAP1O95153 1857 aa17.55■□□□□ 0.4
IFFO1-208ENST00000472558 RBM25P49756 843 aaKnown RBP17.54■□□□□ 0.4
IFFO1-208ENST00000472558 DZIP1LQ8IYY4 767 aaKnown RBP17.54■□□□□ 0.4
IFFO1-208ENST00000472558 FOXD4L1Q9NU39 408 aa17.54■□□□□ 0.4
IFFO1-208ENST00000472558 DUOX2Q9NRD8 1548 aa17.54■□□□□ 0.4
IFFO1-208ENST00000472558 SNX21Q969T3 373 aa17.54■□□□□ 0.4
IFFO1-208ENST00000472558 KIF2CQ99661 725 aa17.53■□□□□ 0.4
IFFO1-208ENST00000472558 ZKSCAN2Q63HK3 967 aa17.53■□□□□ 0.4
IFFO1-208ENST00000472558 CFAP70Q5T0N1 1121 aa17.52■□□□□ 0.4
IFFO1-208ENST00000472558 TRIM27P14373 513 aa17.52■□□□□ 0.39
IFFO1-208ENST00000472558 HDAC1Q13547 482 aaPredicted RBP17.52■□□□□ 0.39
IFFO1-208ENST00000472558 FTSJ3Q8IY81 847 aaKnown RBP17.52■□□□□ 0.39
IFFO1-208ENST00000472558 RIPK4P57078 832 aa17.51■□□□□ 0.39
IFFO1-208ENST00000472558 TSR2Q969E8 191 aaKnown RBP17.51■□□□□ 0.39
IFFO1-208ENST00000472558 PPP1R9BQ96SB3 815 aa17.51■□□□□ 0.39
IFFO1-208ENST00000472558 KIF3BO15066 747 aa17.5■□□□□ 0.39
IFFO1-208ENST00000472558 GBP4Q96PP9 640 aa17.5■□□□□ 0.39
IFFO1-208ENST00000472558 KANK1Q14678 1352 aa17.5■□□□□ 0.39
IFFO1-208ENST00000472558 CLTCL1P53675 1640 aa17.49■□□□□ 0.39
IFFO1-208ENST00000472558 HSP90AB1P08238 724 aaKnown RBP17.49■□□□□ 0.39
IFFO1-208ENST00000472558 ZFYVE16Q7Z3T8 1539 aa17.49■□□□□ 0.39
IFFO1-208ENST00000472558 RBM10P98175 930 aaKnown RBP17.49■□□□□ 0.39
IFFO1-208ENST00000472558 MORC1Q86VD1 984 aa17.49■□□□□ 0.39
IFFO1-208ENST00000472558 CIZ1Q9ULV3 898 aaPredicted RBP17.49■□□□□ 0.39
IFFO1-208ENST00000472558 NASPP49321 788 aaPredicted RBP17.48■□□□□ 0.39
IFFO1-208ENST00000472558 CCDC173Q0VFZ6 552 aa17.48■□□□□ 0.39
IFFO1-208ENST00000472558 CCDC27Q2M243 656 aa17.48■□□□□ 0.39
IFFO1-208ENST00000472558 RBM42Q9BTD8 480 aaKnown RBP17.48■□□□□ 0.39
IFFO1-208ENST00000472558 OFD1O75665 1012 aa17.48■□□□□ 0.39
IFFO1-208ENST00000472558 SSFA2P28290 1259 aa17.48■□□□□ 0.39
IFFO1-208ENST00000472558 ZSCAN30Q86W11 494 aa17.48■□□□□ 0.39
IFFO1-208ENST00000472558 ITPRIPQ8IWB1 547 aa17.48■□□□□ 0.39
IFFO1-208ENST00000472558 TRPM2O94759 1503 aa17.47■□□□□ 0.39
IFFO1-208ENST00000472558 MTHFSP49914 203 aa17.47■□□□□ 0.39
IFFO1-208ENST00000472558 SKOR2Q2VWA4 1001 aaPredicted RBP17.47■□□□□ 0.39
IFFO1-208ENST00000472558 NSD3Q9BZ95 1437 aa17.47■□□□□ 0.39
IFFO1-208ENST00000472558 ARAP3Q8WWN8 1544 aa17.47■□□□□ 0.39
IFFO1-208ENST00000472558 LNPKQ9C0E8 428 aa17.47■□□□□ 0.39
IFFO1-208ENST00000472558 SSH1Q8WYL5 1049 aa17.46■□□□□ 0.39
IFFO1-208ENST00000472558 SMC4Q9NTJ3 1288 aa17.46■□□□□ 0.39
IFFO1-208ENST00000472558 ATP7AQ04656 1500 aa17.46■□□□□ 0.39
IFFO1-208ENST00000472558 EXOSC9Q06265 439 aaKnown RBP17.45■□□□□ 0.38
IFFO1-208ENST00000472558 SLC12A5Q9H2X9 1139 aa17.45■□□□□ 0.38
IFFO1-208ENST00000472558 PODXL2Q9NZ53 605 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms