RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 FMNL1O95466 1100 aaPredicted RBP15.18■□□□□ 0.02
SGCE-210ENST00000472326 PROCA1Q8NCQ7 364 aaPredicted RBP15.18■□□□□ 0.02
SGCE-210ENST00000472326 SPSB2Q99619 263 aa15.18■□□□□ 0.02
SGCE-210ENST00000472326 C6orf229H3BNL8 230 aa15.17■□□□□ 0.02
SGCE-210ENST00000472326 SKIV2LQ15477 1246 aaKnown RBP15.17■□□□□ 0.02
SGCE-210ENST00000472326 Q3C1V9 767 aa15.17■□□□□ 0.02
SGCE-210ENST00000472326 ATP1B4Q9UN42 357 aaPredicted RBP15.17■□□□□ 0.02
SGCE-210ENST00000472326 ADH1BP00325 375 aa15.15■□□□□ 0.02
SGCE-210ENST00000472326 GJA5P36382 358 aa15.15■□□□□ 0.02
SGCE-210ENST00000472326 QPCTQ16769 361 aa15.15■□□□□ 0.02
SGCE-210ENST00000472326 CABLES1Q8TDN4 633 aa15.15■□□□□ 0.02
SGCE-210ENST00000472326 SALL2Q9Y467 1007 aaPredicted RBP15.15■□□□□ 0.02
SGCE-210ENST00000472326 IFFO2Q5TF58 517 aa15.12■□□□□ 0.01
SGCE-210ENST00000472326 FAM160A2Q8N612 972 aaPredicted RBP15.12■□□□□ 0.01
SGCE-210ENST00000472326 HRCP23327 699 aa15.11■□□□□ 0.01
SGCE-210ENST00000472326 MTMR2Q13614 643 aa15.11■□□□□ 0.01
SGCE-210ENST00000472326 USB1Q9BQ65 265 aaKnown RBP15.11■□□□□ 0.01
SGCE-210ENST00000472326 PRDM9Q9NQV7 894 aa15.11■□□□□ 0.01
SGCE-210ENST00000472326 S1PR4O95977 384 aa15.1■□□□□ 0.01
SGCE-210ENST00000472326 FBXO31Q5XUX0 539 aaPredicted RBP15.09■□□□□ 0.01
SGCE-210ENST00000472326 RETREG3Q86VR2 466 aa15.09■□□□□ 0.01
SGCE-210ENST00000472326 PCMTD1Q96MG8 357 aaPredicted RBP15.09■□□□□ 0.01
SGCE-210ENST00000472326 SLC6A16Q9GZN6 736 aa15.09■□□□□ 0.01
SGCE-210ENST00000472326 ZBTB3Q9H5J0 574 aa15.09■□□□□ 0.01
SGCE-210ENST00000472326 GOPCQ9HD26 462 aa15.09■□□□□ 0.01
SGCE-210ENST00000472326 TUSC1Q2TAM9 212 aa15.08■□□□□ 0
SGCE-210ENST00000472326 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.08■□□□□ 0
SGCE-210ENST00000472326 NUTM2BA6NNL0 878 aaPredicted RBP15.07■□□□□ 0
SGCE-210ENST00000472326 NUTM2EB1AL46 878 aaPredicted RBP15.07■□□□□ 0
SGCE-210ENST00000472326 NUTM2DQ5VT03 806 aaPredicted RBP15.07■□□□□ 0
SGCE-210ENST00000472326 PPP1R18Q6NYC8 613 aa15.07■□□□□ 0
SGCE-210ENST00000472326 NUTM2AQ8IVF1 878 aaPredicted RBP15.07■□□□□ 0
SGCE-210ENST00000472326 LILRB3O75022 631 aa15.06■□□□□ 0
SGCE-210ENST00000472326 MSS51Q4VC12 460 aa15.05■□□□□ -0
SGCE-210ENST00000472326 RTL5Q5HYW3 569 aaPredicted RBP15.05■□□□□ -0
SGCE-210ENST00000472326 PRPF38BQ5VTL8 546 aaKnown RBP15.05■□□□□ -0
SGCE-210ENST00000472326 PRR7Q8TB68 274 aa15.05■□□□□ -0
SGCE-210ENST00000472326 A0A0G2JS52 829 aa15.04■□□□□ -0
SGCE-210ENST00000472326 PPEF1O14829 653 aaPredicted RBP15.04■□□□□ -0
SGCE-210ENST00000472326 CFAP99D6REC4 459 aa15.03■□□□□ -0
SGCE-210ENST00000472326 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.02■□□□□ -0
SGCE-210ENST00000472326 SPDYE5A6NIY4 337 aa15.01□□□□□ -0.01
SGCE-210ENST00000472326 RNF223E7ERA6 249 aa15□□□□□ -0.01
SGCE-210ENST00000472326 TSC1Q92574 1164 aa15□□□□□ -0.01
SGCE-210ENST00000472326 GGCXP38435 758 aa14.99□□□□□ -0.01
SGCE-210ENST00000472326 DXOO77932 396 aaKnown RBP14.97□□□□□ -0.01
SGCE-210ENST00000472326 JUNDP17535 347 aa14.97□□□□□ -0.01
SGCE-210ENST00000472326 MMP16P51512 607 aa14.97□□□□□ -0.01
SGCE-210ENST00000472326 TMEM132AQ24JP5 1023 aa14.97□□□□□ -0.01
SGCE-210ENST00000472326 PPP2R2DQ66LE6 453 aa14.95□□□□□ -0.02
SGCE-210ENST00000472326 FCF1Q9Y324 198 aaKnown RBP14.95□□□□□ -0.02
SGCE-210ENST00000472326 RFC5P40937 340 aa14.93□□□□□ -0.02
SGCE-210ENST00000472326 PLA2G2CQ5R387 149 aa14.91□□□□□ -0.02
SGCE-210ENST00000472326 ANKLE1Q8NAG6 615 aa14.91□□□□□ -0.02
SGCE-210ENST00000472326 PER1O15534 1290 aaPredicted RBP14.9□□□□□ -0.02
SGCE-210ENST00000472326 AP1G2O75843 785 aa14.9□□□□□ -0.02
SGCE-210ENST00000472326 DESI1Q6ICB0 168 aa14.9□□□□□ -0.02
SGCE-210ENST00000472326 CCDC24Q8N4L8 307 aa14.9□□□□□ -0.02
SGCE-210ENST00000472326 CTDSPL2Q05D32 466 aa14.89□□□□□ -0.03
SGCE-210ENST00000472326 HELBQ8NG08 1087 aaPredicted RBP14.89□□□□□ -0.03
SGCE-210ENST00000472326 NUDT12Q9BQG2 462 aa14.88□□□□□ -0.03
SGCE-210ENST00000472326 LYPD8Q6UX82 237 aa14.86□□□□□ -0.03
SGCE-210ENST00000472326 PTPRNQ16849 979 aa14.85□□□□□ -0.03
SGCE-210ENST00000472326 CCNYL3P0C7X3 344 aa14.84□□□□□ -0.03
SGCE-210ENST00000472326 EMID1Q96A84 441 aaPredicted RBP14.84□□□□□ -0.03
SGCE-210ENST00000472326 LRRN4Q8WUT4 740 aa14.83□□□□□ -0.04
SGCE-210ENST00000472326 PTCRAQ6ISU1 281 aaPredicted RBP14.81□□□□□ -0.04
SGCE-210ENST00000472326 LIAT1Q6ZQX7 453 aa14.81□□□□□ -0.04
SGCE-210ENST00000472326 PRKD2Q9BZL6 878 aa14.81□□□□□ -0.04
SGCE-210ENST00000472326 USP17L8P0C7I0 530 aa14.8□□□□□ -0.04
SGCE-210ENST00000472326 EVA1BQ9NVM1 165 aa14.8□□□□□ -0.04
SGCE-210ENST00000472326 MAP10Q9P2G4 905 aa14.8□□□□□ -0.04
SGCE-210ENST00000472326 CTHP32929 405 aa14.79□□□□□ -0.04
SGCE-210ENST00000472326 TMEM259Q4ZIN3 620 aa14.79□□□□□ -0.04
SGCE-210ENST00000472326 SLC19A1P41440 591 aa14.78□□□□□ -0.04
SGCE-210ENST00000472326 F12P00748 615 aaPredicted RBP14.77□□□□□ -0.05
SGCE-210ENST00000472326 KCNH2Q12809 1159 aa14.77□□□□□ -0.05
SGCE-210ENST00000472326 HMX1Q9NP08 348 aaPredicted RBP14.76□□□□□ -0.05
SGCE-210ENST00000472326 ZBTB24O43167 697 aaPredicted RBP14.75□□□□□ -0.05
SGCE-210ENST00000472326 UNC93B1Q9H1C4 597 aa14.74□□□□□ -0.05
SGCE-210ENST00000472326 SNRKQ9NRH2 765 aa14.72□□□□□ -0.05
SGCE-210ENST00000472326 TRIM32Q13049 653 aa14.71□□□□□ -0.05
SGCE-210ENST00000472326 NR6A1Q15406 480 aa14.71□□□□□ -0.05
SGCE-210ENST00000472326 EPS8L1Q8TE68 723 aa14.71□□□□□ -0.05
SGCE-210ENST00000472326 V9GY48 417 aaPredicted RBP14.71□□□□□ -0.05
SGCE-210ENST00000472326 RPIAP49247 311 aa14.7□□□□□ -0.06
SGCE-210ENST00000472326 SPRYD7Q5W111 196 aa14.7□□□□□ -0.06
SGCE-210ENST00000472326 BANK1Q8NDB2 785 aa14.69□□□□□ -0.06
SGCE-210ENST00000472326 RGS20O76081 388 aa14.68□□□□□ -0.06
SGCE-210ENST00000472326 LINC01559Q495D7 138 aa14.67□□□□□ -0.06
SGCE-210ENST00000472326 MTMR14Q8NCE2 650 aa14.67□□□□□ -0.06
SGCE-210ENST00000472326 CD2BP2O95400 341 aaKnown RBP14.66□□□□□ -0.06
SGCE-210ENST00000472326 BAP1Q92560 729 aa14.66□□□□□ -0.06
SGCE-210ENST00000472326 ZNF697Q5TEC3 545 aa14.65□□□□□ -0.06
SGCE-210ENST00000472326 TRIM34Q9BYJ4 488 aa14.65□□□□□ -0.06
SGCE-210ENST00000472326 SKOR1P84550 965 aa14.64□□□□□ -0.07
SGCE-210ENST00000472326 GJD4Q96KN9 370 aaPredicted RBP14.64□□□□□ -0.07
SGCE-210ENST00000472326 ZNF598Q86UK7 904 aaKnown RBP14.63□□□□□ -0.07
SGCE-210ENST00000472326 SH3BP2P78314 561 aa14.61□□□□□ -0.07
SGCE-210ENST00000472326 MCM6Q14566 821 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms