RNA–Protein interactions for RNA: ENST00000472147.1

ITGB1-209, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-209ENST00000472147 PPP1R37O75864 691 aa9.23□□□□□ -0.93
ITGB1-209ENST00000472147 IRX5P78411 483 aaPredicted RBP9.23□□□□□ -0.93
ITGB1-209ENST00000472147 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.23□□□□□ -0.934e-16■□□□□ 11.1
ITGB1-209ENST00000472147 CEP162Q5TB80 1403 aa9.22□□□□□ -0.93
ITGB1-209ENST00000472147 LRRC7Q96NW7 1537 aa9.22□□□□□ -0.93
ITGB1-209ENST00000472147 UGGT1Q9NYU2 1555 aa9.22□□□□□ -0.93
ITGB1-209ENST00000472147 KCNA6P17658 529 aa9.22□□□□□ -0.93
ITGB1-209ENST00000472147 HAP1P54257 671 aaPredicted RBP9.22□□□□□ -0.93
ITGB1-209ENST00000472147 POTEAQ6S8J7 498 aa9.22□□□□□ -0.93
ITGB1-209ENST00000472147 TSHZ2Q9NRE2 1034 aa9.22□□□□□ -0.93
ITGB1-209ENST00000472147 VWDEQ8N2E2 1590 aa9.21□□□□□ -0.93
ITGB1-209ENST00000472147 INO80Q9ULG1 1556 aaPredicted RBP9.21□□□□□ -0.93
ITGB1-209ENST00000472147 LRRIQ1Q96JM4 1722 aa9.21□□□□□ -0.94
ITGB1-209ENST00000472147 HDGFP51858 240 aaKnown RBP9.2□□□□□ -0.94
ITGB1-209ENST00000472147 PROSER2Q86WR7 435 aaPredicted RBP9.2□□□□□ -0.94
ITGB1-209ENST00000472147 PDCD7Q8N8D1 485 aaKnown RBP9.2□□□□□ -0.94
ITGB1-209ENST00000472147 KRTAP3-3Q9BYR6 98 aa9.2□□□□□ -0.94
ITGB1-209ENST00000472147 KRTAP3-2Q9BYR7 98 aa9.2□□□□□ -0.94
ITGB1-209ENST00000472147 SLAIN2Q9P270 581 aa9.2□□□□□ -0.94
ITGB1-209ENST00000472147 KDM5DQ9BY66 1539 aa9.2□□□□□ -0.94
ITGB1-209ENST00000472147 NEURL4Q96JN8 1562 aa9.2□□□□□ -0.94
ITGB1-209ENST00000472147 DEPDC5O75140 1603 aa9.2□□□□□ -0.94
ITGB1-209ENST00000472147 ADGBQ8N7X0 1667 aa9.2□□□□□ -0.94
ITGB1-209ENST00000472147 OCEL1Q9H607 264 aa9.19□□□□□ -0.94
ITGB1-209ENST00000472147 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.19□□□□□ -0.94
ITGB1-209ENST00000472147 SRCAPQ6ZRS2 3230 aa9.19□□□□□ -0.94
ITGB1-209ENST00000472147 EMP3P54852 163 aa9.18□□□□□ -0.94
ITGB1-209ENST00000472147 DPY19L2Q6NUT2 758 aa9.18□□□□□ -0.94
ITGB1-209ENST00000472147 CCDC141Q6ZP82 1450 aa9.18□□□□□ -0.94
ITGB1-209ENST00000472147 ALKQ9UM73 1620 aa9.17□□□□□ -0.94
ITGB1-209ENST00000472147 IDI1Q13907 227 aa9.17□□□□□ -0.94
ITGB1-209ENST00000472147 SLC52A1Q9NWF4 448 aa9.16□□□□□ -0.94
ITGB1-209ENST00000472147 ARHGAP31Q2M1Z3 1444 aa9.15□□□□□ -0.94
ITGB1-209ENST00000472147 TMEM2Q9UHN6 1383 aa9.15□□□□□ -0.94
ITGB1-209ENST00000472147 ZNF772Q68DY9 489 aaPredicted RBP9.15□□□□□ -0.94
ITGB1-209ENST00000472147 HS3ST6Q96QI5 342 aa9.15□□□□□ -0.94
ITGB1-209ENST00000472147 SCAF11Q99590 1463 aaKnown RBP9.15□□□□□ -0.95
ITGB1-209ENST00000472147 TMEM94Q12767 1356 aa9.14□□□□□ -0.95
ITGB1-209ENST00000472147 POTEB3A0JP26 581 aa9.14□□□□□ -0.95
ITGB1-209ENST00000472147 POTEBQ6S5H4 581 aa9.14□□□□□ -0.95
ITGB1-209ENST00000472147 SLC26A8Q96RN1 970 aa9.14□□□□□ -0.95
ITGB1-209ENST00000472147 VSIG10Q8N0Z9 540 aa9.13□□□□□ -0.95
ITGB1-209ENST00000472147 BCANQ96GW7 911 aa9.13□□□□□ -0.95
ITGB1-209ENST00000472147 RRP7BPQ9NSQ0 103 aa9.13□□□□□ -0.95
ITGB1-209ENST00000472147 ERVK-7P63135 1459 aa9.13□□□□□ -0.95
ITGB1-209ENST00000472147 NCOA2Q15596 1464 aa9.13□□□□□ -0.95
ITGB1-209ENST00000472147 TIAM1Q13009 1591 aa9.12□□□□□ -0.95
ITGB1-209ENST00000472147 POLR1AO95602 1720 aaPredicted RBP9.12□□□□□ -0.95
ITGB1-209ENST00000472147 FAM205CA6NFA0 338 aa9.12□□□□□ -0.95
ITGB1-209ENST00000472147 CADPS2Q86UW7 1296 aa9.12□□□□□ -0.95
ITGB1-209ENST00000472147 UPF1Q92900 1129 aaKnown RBP eCLIP9.12□□□□□ -0.95
ITGB1-209ENST00000472147 KDM2AQ9Y2K7 1162 aa9.12□□□□□ -0.95
ITGB1-209ENST00000472147 TBX22Q9Y458 520 aa9.12□□□□□ -0.95
ITGB1-209ENST00000472147 ARHGAP23Q9P227 1491 aa9.12□□□□□ -0.95
ITGB1-209ENST00000472147 KANK1Q14678 1352 aa9.12□□□□□ -0.95
ITGB1-209ENST00000472147 JCADQ9P266 1359 aa9.12□□□□□ -0.95
ITGB1-209ENST00000472147 SLIT1O75093 1534 aa9.11□□□□□ -0.95
ITGB1-209ENST00000472147 EHBP1L1Q8N3D4 1523 aa9.11□□□□□ -0.95
ITGB1-209ENST00000472147 SPATA31A6Q5VVP1 1343 aa9.11□□□□□ -0.95
ITGB1-209ENST00000472147 IQGAP1P46940 1657 aa9.11□□□□□ -0.95
ITGB1-209ENST00000472147 CAMSAP2Q08AD1 1489 aa9.11□□□□□ -0.95
ITGB1-209ENST00000472147 RBM33Q96EV2 1170 aaKnown RBP9.11□□□□□ -0.95
ITGB1-209ENST00000472147 C19orf44Q9H6X5 657 aa9.11□□□□□ -0.95
ITGB1-209ENST00000472147 ABCC3O15438 1527 aa9.1□□□□□ -0.95
ITGB1-209ENST00000472147 RXRBP28702 533 aa9.1□□□□□ -0.95
ITGB1-209ENST00000472147 MYOM3Q5VTT5 1437 aa9.1□□□□□ -0.95
ITGB1-209ENST00000472147 ARHGEF5Q12774 1597 aa9.1□□□□□ -0.95
ITGB1-209ENST00000472147 MSH6P52701 1360 aa9.1□□□□□ -0.95
ITGB1-209ENST00000472147 NCOA3Q9Y6Q9 1424 aa9.09□□□□□ -0.95
ITGB1-209ENST00000472147 KANK4Q5T7N3 995 aaPredicted RBP9.09□□□□□ -0.95
ITGB1-209ENST00000472147 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.09□□□□□ -0.95
ITGB1-209ENST00000472147 ATF3P18847 181 aa9.08□□□□□ -0.96
ITGB1-209ENST00000472147 MEX3CQ5U5Q3 659 aaKnown RBP9.08□□□□□ -0.96
ITGB1-209ENST00000472147 RNF17Q9BXT8 1623 aaKnown RBP9.08□□□□□ -0.96
ITGB1-209ENST00000472147 MICALL2Q8IY33 904 aa9.07□□□□□ -0.96
ITGB1-209ENST00000472147 L3MBTL3Q96JM7 780 aaPredicted RBP9.07□□□□□ -0.96
ITGB1-209ENST00000472147 BOLA1Q9Y3E2 137 aa9.07□□□□□ -0.96
ITGB1-209ENST00000472147 KIF15Q9NS87 1388 aa9.07□□□□□ -0.96
ITGB1-209ENST00000472147 SYNMO15061 1565 aa9.07□□□□□ -0.96
ITGB1-209ENST00000472147 STRCP1A6NGW2 1772 aa9.07□□□□□ -0.96
ITGB1-209ENST00000472147 DUOX2Q9NRD8 1548 aa9.06□□□□□ -0.96
ITGB1-209ENST00000472147 LRRC9Q6ZRR7 1453 aa9.06□□□□□ -0.96
ITGB1-209ENST00000472147 C14orf37Q86TY3 774 aa9.05□□□□□ -0.96
ITGB1-209ENST00000472147 PRDM15P57071 1507 aaPredicted RBP9.05□□□□□ -0.96
ITGB1-209ENST00000472147 ERBINQ96RT1 1412 aa9.05□□□□□ -0.96
ITGB1-209ENST00000472147 TET3O43151 1660 aa9.04□□□□□ -0.96
ITGB1-209ENST00000472147 PPP1R15AO75807 674 aaPredicted RBP9.04□□□□□ -0.96
ITGB1-209ENST00000472147 TRIM52Q96A61 297 aa9.04□□□□□ -0.96
ITGB1-209ENST00000472147 LRRC59Q96AG4 307 aaKnown RBP9.04□□□□□ -0.96
ITGB1-209ENST00000472147 FGD6Q6ZV73 1430 aa9.04□□□□□ -0.96
ITGB1-209ENST00000472147 MAST1Q9Y2H9 1570 aa9.03□□□□□ -0.96
ITGB1-209ENST00000472147 ANKRD30AQ9BXX3 1397 aa9.03□□□□□ -0.96
ITGB1-209ENST00000472147 QTRT2Q9H974 415 aaKnown RBP9.03□□□□□ -0.96
ITGB1-209ENST00000472147 CHIC2Q9UKJ5 165 aa9.03□□□□□ -0.96
ITGB1-209ENST00000472147 ABCC5O15440 1437 aa9.03□□□□□ -0.96
ITGB1-209ENST00000472147 ZC3H13Q5T200 1668 aaKnown RBP9.03□□□□□ -0.96
ITGB1-209ENST00000472147 UBR1Q8IWV7 1749 aa9.02□□□□□ -0.96
ITGB1-209ENST00000472147 PLEKHG1Q9ULL1 1385 aa9.02□□□□□ -0.97
ITGB1-209ENST00000472147 RBM6P78332 1123 aaKnown RBP9.02□□□□□ -0.97
ITGB1-209ENST00000472147 C3orf67Q6ZVT6 689 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms