RNA–Protein interactions for RNA: ENST00000472098.5

MDH1-210, Transcript of malate dehydrogenase 1, humanhuman

TSL 1 (best)

Gene MDH1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-210ENST00000472098 GTF3C3Q9Y5Q9 886 aa13.27□□□□□ -0.29
MDH1-210ENST00000472098 HLA-CQ95604 372 aa13.26□□□□□ -0.29
MDH1-210ENST00000472098 MORN1Q5T089 497 aa13.25□□□□□ -0.29
MDH1-210ENST00000472098 PCDHB3Q9Y5E6 796 aa13.25□□□□□ -0.29
MDH1-210ENST00000472098 NRG2O14511 850 aaPredicted RBP13.24□□□□□ -0.29
MDH1-210ENST00000472098 GUCA2AQ02747 115 aa13.24□□□□□ -0.29
MDH1-210ENST00000472098 PUS10Q3MIT2 529 aaKnown RBP13.24□□□□□ -0.29
MDH1-210ENST00000472098 PCDHB15Q9Y5E8 787 aa13.24□□□□□ -0.29
MDH1-210ENST00000472098 V9GY48 417 aaPredicted RBP13.24□□□□□ -0.29
MDH1-210ENST00000472098 NKX2-3Q8TAU0 364 aa13.23□□□□□ -0.29
MDH1-210ENST00000472098 PCDHGC3Q9UN70 934 aa13.23□□□□□ -0.29
MDH1-210ENST00000472098 CSPP1Q1MSJ5 1256 aa13.22□□□□□ -0.29
MDH1-210ENST00000472098 PRPF38BQ5VTL8 546 aaKnown RBP13.21□□□□□ -0.29
MDH1-210ENST00000472098 SLC27A5Q9Y2P5 690 aa13.21□□□□□ -0.29
MDH1-210ENST00000472098 LILRB3O75022 631 aa13.2□□□□□ -0.3
MDH1-210ENST00000472098 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.2□□□□□ -0.3
MDH1-210ENST00000472098 NR1I2O75469 434 aa13.19□□□□□ -0.3
MDH1-210ENST00000472098 PPP2R2DQ66LE6 453 aa13.19□□□□□ -0.3
MDH1-210ENST00000472098 BLOC1S3Q6QNY0 202 aa13.19□□□□□ -0.3
MDH1-210ENST00000472098 QPCTQ16769 361 aa13.18□□□□□ -0.3
MDH1-210ENST00000472098 Q3C1V9 767 aa13.18□□□□□ -0.3
MDH1-210ENST00000472098 ZBTB3Q9H5J0 574 aa13.18□□□□□ -0.3
MDH1-210ENST00000472098 HRCP23327 699 aa13.17□□□□□ -0.3
MDH1-210ENST00000472098 SCUBE3Q8IX30 993 aa13.17□□□□□ -0.3
MDH1-210ENST00000472098 CABLES1Q8TDN4 633 aa13.16□□□□□ -0.3
MDH1-210ENST00000472098 NUTM2BA6NNL0 878 aaPredicted RBP13.15□□□□□ -0.3
MDH1-210ENST00000472098 NUTM2EB1AL46 878 aaPredicted RBP13.15□□□□□ -0.3
MDH1-210ENST00000472098 MTMR2Q13614 643 aa13.15□□□□□ -0.3
MDH1-210ENST00000472098 NUTM2DQ5VT03 806 aaPredicted RBP13.15□□□□□ -0.3
MDH1-210ENST00000472098 FBXO31Q5XUX0 539 aaPredicted RBP13.15□□□□□ -0.3
MDH1-210ENST00000472098 NUTM2AQ8IVF1 878 aaPredicted RBP13.15□□□□□ -0.3
MDH1-210ENST00000472098 SALL2Q9Y467 1007 aaPredicted RBP13.15□□□□□ -0.3
MDH1-210ENST00000472098 SPDYE5A6NIY4 337 aa13.14□□□□□ -0.31
MDH1-210ENST00000472098 C6orf229H3BNL8 230 aa13.14□□□□□ -0.31
MDH1-210ENST00000472098 COPS2P61201 443 aa13.14□□□□□ -0.31
MDH1-210ENST00000472098 RFC5P40937 340 aa13.13□□□□□ -0.31
MDH1-210ENST00000472098 RTL5Q5HYW3 569 aaPredicted RBP13.13□□□□□ -0.31
MDH1-210ENST00000472098 BRICD5Q6PL45 260 aa13.12□□□□□ -0.31
MDH1-210ENST00000472098 SYMPKQ92797 1274 aaKnown RBP13.12□□□□□ -0.31
MDH1-210ENST00000472098 FMNL1O95466 1100 aaPredicted RBP13.11□□□□□ -0.31
MDH1-210ENST00000472098 EMID1Q96A84 441 aaPredicted RBP13.11□□□□□ -0.31
MDH1-210ENST00000472098 THAP11Q96EK4 314 aa13.11□□□□□ -0.31
MDH1-210ENST00000472098 RNF19BQ6ZMZ0 732 aa13.1□□□□□ -0.31
MDH1-210ENST00000472098 RETREG3Q86VR2 466 aa13.1□□□□□ -0.31
MDH1-210ENST00000472098 PDZRN3Q9UPQ7 1066 aa13.1□□□□□ -0.31
MDH1-210ENST00000472098 ZPR1O75312 459 aa13.09□□□□□ -0.31
MDH1-210ENST00000472098 TMEM259Q4ZIN3 620 aa13.09□□□□□ -0.31
MDH1-210ENST00000472098 TRIM67Q6ZTA4 783 aa13.09□□□□□ -0.31
MDH1-210ENST00000472098 USB1Q9BQ65 265 aaKnown RBP13.07□□□□□ -0.32
MDH1-210ENST00000472098 PRR7Q8TB68 274 aa13.06□□□□□ -0.32
MDH1-210ENST00000472098 CFAP99D6REC4 459 aa13.05□□□□□ -0.32
MDH1-210ENST00000472098 BANK1Q8NDB2 785 aa13.05□□□□□ -0.32
MDH1-210ENST00000472098 SPSB2Q99619 263 aa13.05□□□□□ -0.32
MDH1-210ENST00000472098 AP1G2O75843 785 aa13.03□□□□□ -0.32
MDH1-210ENST00000472098 FLIIQ13045 1269 aa13.03□□□□□ -0.32
MDH1-210ENST00000472098 HELBQ8NG08 1087 aaPredicted RBP13.03□□□□□ -0.32
MDH1-210ENST00000472098 TLL1O43897 1013 aa13.02□□□□□ -0.33
MDH1-210ENST00000472098 ADH1BP00325 375 aa13.02□□□□□ -0.33
MDH1-210ENST00000472098 ZNF787Q6DD87 383 aa13.02□□□□□ -0.33
MDH1-210ENST00000472098 MSS51Q4VC12 460 aa13.01□□□□□ -0.33
MDH1-210ENST00000472098 DESI1Q6ICB0 168 aa13.01□□□□□ -0.33
MDH1-210ENST00000472098 FAM160A2Q8N612 972 aaPredicted RBP13□□□□□ -0.33
MDH1-210ENST00000472098 TSC1Q92574 1164 aa13□□□□□ -0.33
MDH1-210ENST00000472098 RNF223E7ERA6 249 aa12.99□□□□□ -0.33
MDH1-210ENST00000472098 GGCXP38435 758 aa12.99□□□□□ -0.33
MDH1-210ENST00000472098 CTDSPL2Q05D32 466 aa12.98□□□□□ -0.33
MDH1-210ENST00000472098 MCM6Q14566 821 aa12.98□□□□□ -0.33
MDH1-210ENST00000472098 ZNF775Q96BV0 537 aaPredicted RBP12.98□□□□□ -0.33
MDH1-210ENST00000472098 USP17L8P0C7I0 530 aa12.97□□□□□ -0.33
MDH1-210ENST00000472098 ERICH6Q7L0X2 663 aa12.97□□□□□ -0.33
MDH1-210ENST00000472098 JUNDP17535 347 aa12.96□□□□□ -0.33
MDH1-210ENST00000472098 SNRKQ9NRH2 765 aa12.96□□□□□ -0.33
MDH1-210ENST00000472098 SOCS7O14512 581 aa12.94□□□□□ -0.34
MDH1-210ENST00000472098 DXOO77932 396 aaKnown RBP12.94□□□□□ -0.34
MDH1-210ENST00000472098 MMP16P51512 607 aa12.94□□□□□ -0.34
MDH1-210ENST00000472098 LYPD8Q6UX82 237 aa12.94□□□□□ -0.34
MDH1-210ENST00000472098 SLC6A16Q9GZN6 736 aa12.94□□□□□ -0.34
MDH1-210ENST00000472098 SLC19A1P41440 591 aa12.93□□□□□ -0.34
MDH1-210ENST00000472098 PRDM9Q9NQV7 894 aa12.93□□□□□ -0.34
MDH1-210ENST00000472098 PER1O15534 1290 aaPredicted RBP12.92□□□□□ -0.34
MDH1-210ENST00000472098 C14orf37Q86TY3 774 aa12.92□□□□□ -0.34
MDH1-210ENST00000472098 MTMR14Q8NCE2 650 aa12.92□□□□□ -0.34
MDH1-210ENST00000472098 PTPRNQ16849 979 aa12.91□□□□□ -0.34
MDH1-210ENST00000472098 SPRYD7Q5W111 196 aa12.91□□□□□ -0.34
MDH1-210ENST00000472098 LRRN4Q8WUT4 740 aa12.91□□□□□ -0.34
MDH1-210ENST00000472098 MYT1Q01538 1121 aa12.9□□□□□ -0.34
MDH1-210ENST00000472098 POTECB2RU33 542 aa12.89□□□□□ -0.35
MDH1-210ENST00000472098 APBB1O00213 710 aa12.89□□□□□ -0.35
MDH1-210ENST00000472098 PPEF1O14829 653 aaPredicted RBP12.89□□□□□ -0.35
MDH1-210ENST00000472098 LIAT1Q6ZQX7 453 aa12.89□□□□□ -0.35
MDH1-210ENST00000472098 S1PR4O95977 384 aa12.88□□□□□ -0.35
MDH1-210ENST00000472098 TIMELESSQ9UNS1 1208 aa12.88□□□□□ -0.35
MDH1-210ENST00000472098 PRR20EP86478 221 aa12.87□□□□□ -0.35
MDH1-210ENST00000472098 PRR20CP86479 221 aa12.87□□□□□ -0.35
MDH1-210ENST00000472098 PRR20DP86480 221 aa12.87□□□□□ -0.35
MDH1-210ENST00000472098 PRR20BP86481 221 aa12.87□□□□□ -0.35
MDH1-210ENST00000472098 PRR20AP86496 221 aa12.87□□□□□ -0.35
MDH1-210ENST00000472098 ZNF598Q86UK7 904 aaKnown RBP12.87□□□□□ -0.35
MDH1-210ENST00000472098 ANKLE1Q8NAG6 615 aa12.87□□□□□ -0.35
MDH1-210ENST00000472098 HMX1Q9NP08 348 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms