RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 RPIAP49247 311 aa11.99□□□□□ -0.49
CD46-213ENST00000471987 MMP16P51512 607 aa11.98□□□□□ -0.49
CD46-213ENST00000471987 GUCA2AQ02747 115 aa11.98□□□□□ -0.49
CD46-213ENST00000471987 TRIM67Q6ZTA4 783 aa11.98□□□□□ -0.49
CD46-213ENST00000471987 PRR20EP86478 221 aa11.97□□□□□ -0.49
CD46-213ENST00000471987 PRR20CP86479 221 aa11.97□□□□□ -0.49
CD46-213ENST00000471987 PRR20DP86480 221 aa11.97□□□□□ -0.49
CD46-213ENST00000471987 PRR20BP86481 221 aa11.97□□□□□ -0.49
CD46-213ENST00000471987 PRR20AP86496 221 aa11.97□□□□□ -0.49
CD46-213ENST00000471987 PARP9Q8IXQ6 854 aa11.97□□□□□ -0.49
CD46-213ENST00000471987 SPIRE2Q8WWL2 714 aa11.96□□□□□ -0.49
CD46-213ENST00000471987 CD2BP2O95400 341 aaKnown RBP11.95□□□□□ -0.5
CD46-213ENST00000471987 FDX1P10109 184 aa11.95□□□□□ -0.5
CD46-213ENST00000471987 TRAF7Q6Q0C0 670 aa11.95□□□□□ -0.5
CD46-213ENST00000471987 ZBTB24O43167 697 aaPredicted RBP11.94□□□□□ -0.5
CD46-213ENST00000471987 DXOO77932 396 aaKnown RBP11.94□□□□□ -0.5
CD46-213ENST00000471987 BCANQ96GW7 911 aa11.94□□□□□ -0.5
CD46-213ENST00000471987 BEGAINQ9BUH8 593 aa11.94□□□□□ -0.5
CD46-213ENST00000471987 GDF9O60383 454 aa11.92□□□□□ -0.5
CD46-213ENST00000471987 DIXDC1Q155Q3 683 aa11.92□□□□□ -0.5
CD46-213ENST00000471987 RETREG3Q86VR2 466 aa11.92□□□□□ -0.5
CD46-213ENST00000471987 SYMPKQ92797 1274 aaKnown RBP11.91□□□□□ -0.5
CD46-213ENST00000471987 SLC24A3Q9HC58 644 aa11.91□□□□□ -0.5
CD46-213ENST00000471987 TNFRSF10AO00220 468 aa11.9□□□□□ -0.5
CD46-213ENST00000471987 PCDHGC3Q9UN70 934 aa11.9□□□□□ -0.5
CD46-213ENST00000471987 MOXD2PA6NHM9 499 aa11.89□□□□□ -0.51
CD46-213ENST00000471987 C6orf229H3BNL8 230 aa11.89□□□□□ -0.51
CD46-213ENST00000471987 MS4A1P11836 297 aa11.89□□□□□ -0.51
CD46-213ENST00000471987 PDE4DQ08499 809 aa11.89□□□□□ -0.51
CD46-213ENST00000471987 LCE2BO14633 110 aa11.88□□□□□ -0.51
CD46-213ENST00000471987 JUNDP17535 347 aa11.88□□□□□ -0.51
CD46-213ENST00000471987 NDUFV2P19404 249 aa11.88□□□□□ -0.51
CD46-213ENST00000471987 FOXC1Q12948 553 aa11.88□□□□□ -0.51
CD46-213ENST00000471987 PKDCCQ504Y2 493 aa11.87□□□□□ -0.51
CD46-213ENST00000471987 TBC1D2Q9BYX2 928 aa11.87□□□□□ -0.51
CD46-213ENST00000471987 PKD2L1Q9P0L9 805 aa11.87□□□□□ -0.51
CD46-213ENST00000471987 DGAT1O75907 488 aa11.86□□□□□ -0.51
CD46-213ENST00000471987 GJA5P36382 358 aa11.86□□□□□ -0.51
CD46-213ENST00000471987 CCDC24Q8N4L8 307 aa11.86□□□□□ -0.51
CD46-213ENST00000471987 TRIM32Q13049 653 aa11.85□□□□□ -0.51
CD46-213ENST00000471987 SPDYE5A6NIY4 337 aa11.83□□□□□ -0.52
CD46-213ENST00000471987 FAM187AA6NFU0 413 aa11.82□□□□□ -0.52
CD46-213ENST00000471987 MTMR2Q13614 643 aa11.82□□□□□ -0.52
CD46-213ENST00000471987 RSBN1LQ6PCB5 846 aaPredicted RBP11.82□□□□□ -0.52
CD46-213ENST00000471987 NUDT12Q9BQG2 462 aa11.81□□□□□ -0.52
CD46-213ENST00000471987 WNT7AO00755 349 aa11.79□□□□□ -0.52
CD46-213ENST00000471987 SPTLC1O15269 473 aa11.79□□□□□ -0.52
CD46-213ENST00000471987 CYP4X1Q8N118 509 aa11.79□□□□□ -0.52
CD46-213ENST00000471987 PRR7Q8TB68 274 aa11.79□□□□□ -0.52
CD46-213ENST00000471987 MYT1Q01538 1121 aa11.78□□□□□ -0.52
CD46-213ENST00000471987 TOR4AQ9NXH8 423 aa11.78□□□□□ -0.52
CD46-213ENST00000471987 CCNYL3P0C7X3 344 aa11.77□□□□□ -0.53
CD46-213ENST00000471987 PTPRNQ16849 979 aa11.77□□□□□ -0.53
CD46-213ENST00000471987 DESI1Q6ICB0 168 aa11.77□□□□□ -0.53
CD46-213ENST00000471987 RIC3Q7Z5B4 369 aa11.77□□□□□ -0.53
CD46-213ENST00000471987 WNT7BP56706 349 aa11.76□□□□□ -0.53
CD46-213ENST00000471987 PCDHB15Q9Y5E8 787 aa11.76□□□□□ -0.53
CD46-213ENST00000471987 ZBTB3Q9H5J0 574 aa11.75□□□□□ -0.53
CD46-213ENST00000471987 TTC24A2A3L6 582 aaPredicted RBP11.74□□□□□ -0.53
CD46-213ENST00000471987 PRPF38BQ5VTL8 546 aaKnown RBP11.74□□□□□ -0.53
CD46-213ENST00000471987 MYSM1Q5VVJ2 828 aa11.74□□□□□ -0.53
CD46-213ENST00000471987 HRCP23327 699 aa11.73□□□□□ -0.53
CD46-213ENST00000471987 PTCRAQ6ISU1 281 aaPredicted RBP11.73□□□□□ -0.53
CD46-213ENST00000471987 MRGPRX2Q96LB1 330 aa11.73□□□□□ -0.53
CD46-213ENST00000471987 SNIP1Q8TAD8 396 aaKnown RBP11.72□□□□□ -0.53
CD46-213ENST00000471987 EVA1BQ9NVM1 165 aa11.72□□□□□ -0.53
CD46-213ENST00000471987 SKOR1P84550 965 aa11.71□□□□□ -0.53
CD46-213ENST00000471987 RC3H1Q5TC82 1133 aaKnown RBP11.71□□□□□ -0.53
CD46-213ENST00000471987 CSPP1Q1MSJ5 1256 aa11.7□□□□□ -0.54
CD46-213ENST00000471987 TUSC1Q2TAM9 212 aa11.7□□□□□ -0.54
CD46-213ENST00000471987 RSPH6AQ9H0K4 717 aa11.7□□□□□ -0.54
CD46-213ENST00000471987 AVPP01185 164 aa11.69□□□□□ -0.54
CD46-213ENST00000471987 KCNH2Q12809 1159 aa11.69□□□□□ -0.54
CD46-213ENST00000471987 ZNF787Q6DD87 383 aa11.69□□□□□ -0.54
CD46-213ENST00000471987 LIMD1Q9UGP4 676 aa11.69□□□□□ -0.54
CD46-213ENST00000471987 CFAP99D6REC4 459 aa11.68□□□□□ -0.54
CD46-213ENST00000471987 LYPD8Q6UX82 237 aa11.68□□□□□ -0.54
CD46-213ENST00000471987 CABLES1Q8TDN4 633 aa11.68□□□□□ -0.54
CD46-213ENST00000471987 UNC93B1Q9H1C4 597 aa11.68□□□□□ -0.54
CD46-213ENST00000471987 NUTM2BA6NNL0 878 aaPredicted RBP11.67□□□□□ -0.54
CD46-213ENST00000471987 NUTM2EB1AL46 878 aaPredicted RBP11.67□□□□□ -0.54
CD46-213ENST00000471987 NUTM2DQ5VT03 806 aaPredicted RBP11.67□□□□□ -0.54
CD46-213ENST00000471987 NUTM2AQ8IVF1 878 aaPredicted RBP11.67□□□□□ -0.54
CD46-213ENST00000471987 CRIPAKQ8N1N5 446 aa11.67□□□□□ -0.54
CD46-213ENST00000471987 AAASQ9NRG9 546 aa11.67□□□□□ -0.54
CD46-213ENST00000471987 CTC1Q2NKJ3 1217 aa11.66□□□□□ -0.54
CD46-213ENST00000471987 ST8SIA5O15466 376 aa11.65□□□□□ -0.54
CD46-213ENST00000471987 SMPD1P17405 629 aa11.65□□□□□ -0.54
CD46-213ENST00000471987 CLK2P49760 499 aaKnown RBP11.65□□□□□ -0.54
CD46-213ENST00000471987 LILRB3O75022 631 aa11.64□□□□□ -0.55
CD46-213ENST00000471987 CTHP32929 405 aa11.64□□□□□ -0.55
CD46-213ENST00000471987 QPCTQ16769 361 aa11.64□□□□□ -0.55
CD46-213ENST00000471987 EHBP1Q8NDI1 1231 aa11.64□□□□□ -0.55
CD46-213ENST00000471987 KDM4CQ9H3R0 1056 aa11.64□□□□□ -0.55
CD46-213ENST00000471987 J3QL48 77 aa11.63□□□□□ -0.55
CD46-213ENST00000471987 AXIN1O15169 862 aa11.63□□□□□ -0.55
CD46-213ENST00000471987 SH3BP2P78314 561 aa11.63□□□□□ -0.55
CD46-213ENST00000471987 GPBP1L1Q9HC44 474 aaPredicted RBP11.63□□□□□ -0.55
CD46-213ENST00000471987 SMCPP49901 116 aaPredicted RBP11.62□□□□□ -0.55
CD46-213ENST00000471987 BAP1Q92560 729 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms