RNA–Protein interactions for RNA: ENST00000471842.1

LTA-215, Transcript of lymphotoxin alpha, humanhuman

TSL 2

Gene LTA, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-215ENST00000471842 PLEKHH1Q9ULM0 1364 aa19.29■□□□□ 0.68
LTA-215ENST00000471842 CFAP70Q5T0N1 1121 aa19.28■□□□□ 0.68
LTA-215ENST00000471842 CDC42BPGQ6DT37 1551 aa19.28■□□□□ 0.68
LTA-215ENST00000471842 KDM2AQ9Y2K7 1162 aa19.28■□□□□ 0.68
LTA-215ENST00000471842 KNDC1Q76NI1 1749 aa19.27■□□□□ 0.68
LTA-215ENST00000471842 ESCO1Q5FWF5 840 aa19.27■□□□□ 0.67
LTA-215ENST00000471842 LRRC59Q96AG4 307 aaKnown RBP19.27■□□□□ 0.67
LTA-215ENST00000471842 LAMC1P11047 1609 aa19.26■□□□□ 0.67
LTA-215ENST00000471842 TECPR2O15040 1411 aa19.26■□□□□ 0.67
LTA-215ENST00000471842 SAFB2Q14151 953 aaKnown RBP eCLIP19.25■□□□□ 0.67
LTA-215ENST00000471842 C14orf93Q9H972 538 aaKnown RBP19.25■□□□□ 0.67
LTA-215ENST00000471842 NRXN1Q9ULB1 1477 aa19.25■□□□□ 0.67
LTA-215ENST00000471842 DHX57Q6P158 1386 aaKnown RBP19.25■□□□□ 0.67
LTA-215ENST00000471842 ABCC11Q96J66 1382 aa19.25■□□□□ 0.67
LTA-215ENST00000471842 DCAF11Q8TEB1 546 aa19.24■□□□□ 0.67
LTA-215ENST00000471842 PNPLA6Q8IY17 1366 aa19.23■□□□□ 0.67
LTA-215ENST00000471842 XPCQ01831 940 aaPredicted RBP19.22■□□□□ 0.67
LTA-215ENST00000471842 HRCP23327 699 aa19.21■□□□□ 0.67
LTA-215ENST00000471842 ZNF772Q68DY9 489 aaPredicted RBP19.2■□□□□ 0.66
LTA-215ENST00000471842 C8orf37Q96NL8 207 aa19.2■□□□□ 0.66
LTA-215ENST00000471842 PRAM1Q96QH2 718 aa19.2■□□□□ 0.66
LTA-215ENST00000471842 POGKQ9P215 609 aa19.2■□□□□ 0.66
LTA-215ENST00000471842 ADAMTS2O95450 1211 aa19.19■□□□□ 0.66
LTA-215ENST00000471842 FOXO3O43524 673 aa19.18■□□□□ 0.66
LTA-215ENST00000471842 FMN2Q9NZ56 1722 aa19.17■□□□□ 0.66
LTA-215ENST00000471842 AFF2P51816 1311 aa19.17■□□□□ 0.66
LTA-215ENST00000471842 SOS2Q07890 1332 aaPredicted RBP19.17■□□□□ 0.66
LTA-215ENST00000471842 NPHP3Q7Z494 1330 aa19.17■□□□□ 0.66
LTA-215ENST00000471842 TRAK1Q9UPV9 953 aa19.16■□□□□ 0.66
LTA-215ENST00000471842 ADGRB1O14514 1584 aa19.13■□□□□ 0.65
LTA-215ENST00000471842 SIRT1Q96EB6 747 aa19.13■□□□□ 0.65
LTA-215ENST00000471842 NGLY1Q96IV0 654 aa19.13■□□□□ 0.65
LTA-215ENST00000471842 HIRIP3Q9BW71 556 aaPredicted RBP19.13■□□□□ 0.65
LTA-215ENST00000471842 PXDNQ92626 1479 aa19.13■□□□□ 0.65
LTA-215ENST00000471842 MINK1Q8N4C8 1332 aaPredicted RBP19.12■□□□□ 0.65
LTA-215ENST00000471842 PLEKHG5O94827 1062 aa19.12■□□□□ 0.65
LTA-215ENST00000471842 DLC1Q96QB1 1528 aa19.12■□□□□ 0.65
LTA-215ENST00000471842 KIF1AQ12756 1690 aa19.11■□□□□ 0.65
LTA-215ENST00000471842 RXRBP28702 533 aa19.1■□□□□ 0.65
LTA-215ENST00000471842 PHF8Q9UPP1 1060 aa19.09■□□□□ 0.65
LTA-215ENST00000471842 COL22A1Q8NFW1 1626 aaPredicted RBP19.07■□□□□ 0.64
LTA-215ENST00000471842 LMOD2Q6P5Q4 547 aa19.07■□□□□ 0.64
LTA-215ENST00000471842 KRT28Q7Z3Y7 464 aa19.07■□□□□ 0.64
LTA-215ENST00000471842 STAC3Q96MF2 364 aa19.07■□□□□ 0.64
LTA-215ENST00000471842 RGPD8O14715 1765 aaPredicted RBP19.07■□□□□ 0.64
LTA-215ENST00000471842 PMFBP1Q8TBY8 1022 aa19.06■□□□□ 0.64
LTA-215ENST00000471842 ADGRB2O60241 1585 aa19.05■□□□□ 0.64
LTA-215ENST00000471842 HAP1P54257 671 aaPredicted RBP19.05■□□□□ 0.64
LTA-215ENST00000471842 QTRT2Q9H974 415 aaKnown RBP19.05■□□□□ 0.64
LTA-215ENST00000471842 USP21Q9UK80 565 aa19.04■□□□□ 0.64
LTA-215ENST00000471842 PSME1Q06323 249 aa19.03■□□□□ 0.64
LTA-215ENST00000471842 USP32Q8NFA0 1604 aa19.03■□□□□ 0.64
LTA-215ENST00000471842 ARHGEF28Q8N1W1 1705 aaKnown RBP19.03■□□□□ 0.64
LTA-215ENST00000471842 ANKARQ7Z5J8 1434 aa19.03■□□□□ 0.64
LTA-215ENST00000471842 SPATA31A3Q5VYP0 1347 aa19.02■□□□□ 0.64
LTA-215ENST00000471842 EIF3AQ14152 1382 aaKnown RBP19.02■□□□□ 0.64
LTA-215ENST00000471842 NEUROD1Q13562 356 aa19.02■□□□□ 0.63
LTA-215ENST00000471842 TNS3Q68CZ2 1445 aa19.01■□□□□ 0.63
LTA-215ENST00000471842 TULP4Q9NRJ4 1543 aa19■□□□□ 0.63
LTA-215ENST00000471842 WASLO00401 505 aaPredicted RBP19■□□□□ 0.63
LTA-215ENST00000471842 RBM6P78332 1123 aaKnown RBP19■□□□□ 0.63
LTA-215ENST00000471842 SIN3AQ96ST3 1273 aa18.99■□□□□ 0.63
LTA-215ENST00000471842 RGS12O14924 1447 aa18.99■□□□□ 0.63
LTA-215ENST00000471842 CABLES1Q8TDN4 633 aa18.98■□□□□ 0.63
LTA-215ENST00000471842 PRR36Q9H6K5 1346 aa18.98■□□□□ 0.63
LTA-215ENST00000471842 NBPF1Q3BBV0 1214 aa18.97■□□□□ 0.63
LTA-215ENST00000471842 TRPC5Q9UL62 973 aaPredicted RBP18.97■□□□□ 0.63
LTA-215ENST00000471842 GPRASP1Q5JY77 1395 aa18.97■□□□□ 0.63
LTA-215ENST00000471842 CDK12Q9NYV4 1490 aaPredicted RBP18.97■□□□□ 0.63
LTA-215ENST00000471842 MARF1Q9Y4F3 1742 aaKnown RBP18.97■□□□□ 0.63
LTA-215ENST00000471842 NGDNQ8NEJ9 315 aaKnown RBP18.97■□□□□ 0.63
LTA-215ENST00000471842 KIAA1210Q9ULL0 1709 aa18.96■□□□□ 0.63
LTA-215ENST00000471842 SBNO1A3KN83 1393 aa18.95■□□□□ 0.62
LTA-215ENST00000471842 ARHGEF10O15013 1369 aa18.95■□□□□ 0.62
LTA-215ENST00000471842 PAK3O75914 559 aaPredicted RBP18.95■□□□□ 0.62
LTA-215ENST00000471842 FNBP4Q8N3X1 1017 aaPredicted RBP18.95■□□□□ 0.62
LTA-215ENST00000471842 L3MBTL2Q969R5 705 aa18.95■□□□□ 0.62
LTA-215ENST00000471842 ATRNO75882 1429 aa18.93■□□□□ 0.62
LTA-215ENST00000471842 NUDT16Q96DE0 195 aaKnown RBP18.92■□□□□ 0.62
LTA-215ENST00000471842 CDK19Q9BWU1 502 aa18.92■□□□□ 0.62
LTA-215ENST00000471842 ATP7BP35670 1465 aa18.92■□□□□ 0.62
LTA-215ENST00000471842 UPF1Q92900 1129 aaKnown RBP eCLIP18.91■□□□□ 0.62
LTA-215ENST00000471842 ITSN1Q15811 1721 aa18.91■□□□□ 0.62
LTA-215ENST00000471842 BCL9LQ86UU0 1499 aa18.91■□□□□ 0.62
LTA-215ENST00000471842 ABCA3Q99758 1704 aa18.91■□□□□ 0.62
LTA-215ENST00000471842 TRPM3Q9HCF6 1732 aaPredicted RBP18.9■□□□□ 0.62
LTA-215ENST00000471842 SRPK2P78362 688 aaKnown RBP18.9■□□□□ 0.62
LTA-215ENST00000471842 CCDC9Q9Y3X0 531 aaKnown RBP18.9■□□□□ 0.62
LTA-215ENST00000471842 CENPJQ9HC77 1338 aaPredicted RBP18.89■□□□□ 0.61
LTA-215ENST00000471842 UNC5CLQ8IV45 518 aa18.88■□□□□ 0.61
LTA-215ENST00000471842 PLCH1Q4KWH8 1693 aa18.87■□□□□ 0.61
LTA-215ENST00000471842 QRICH2Q9H0J4 1663 aa18.87■□□□□ 0.61
LTA-215ENST00000471842 SLIT2O94813 1529 aa18.86■□□□□ 0.61
LTA-215ENST00000471842 ROCK2O75116 1388 aaKnown RBP18.86■□□□□ 0.61
LTA-215ENST00000471842 TRPM1Q7Z4N2 1603 aa18.85■□□□□ 0.61
LTA-215ENST00000471842 GJD4Q96KN9 370 aaPredicted RBP18.85■□□□□ 0.61
LTA-215ENST00000471842 ALS2Q96Q42 1657 aa18.85■□□□□ 0.61
LTA-215ENST00000471842 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.85■□□□□ 0.61
LTA-215ENST00000471842 TOPAZ1Q8N9V7 1692 aa18.84■□□□□ 0.61
LTA-215ENST00000471842 ATAD2Q6PL18 1390 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms