RNA–Protein interactions for RNA: ENST00000471772.6

RPS27A-207, Transcript of ribosomal protein S27a, humanhuman

TSL 2

Gene RPS27A, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27A-207ENST00000471772 PRAM1Q96QH2 718 aa11.39□□□□□ -0.59
RPS27A-207ENST00000471772 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.39□□□□□ -0.59
RPS27A-207ENST00000471772 DLC1Q96QB1 1528 aa11.39□□□□□ -0.59
RPS27A-207ENST00000471772 SCAF1Q9H7N4 1312 aaKnown RBP11.37□□□□□ -0.59
RPS27A-207ENST00000471772 PHF23Q9BUL5 403 aaPredicted RBP11.37□□□□□ -0.59
RPS27A-207ENST00000471772 PLEKHH1Q9ULM0 1364 aa11.36□□□□□ -0.59
RPS27A-207ENST00000471772 ROCK2O75116 1388 aaKnown RBP11.35□□□□□ -0.59
RPS27A-207ENST00000471772 GPRASP1Q5JY77 1395 aa11.34□□□□□ -0.59
RPS27A-207ENST00000471772 SAFB2Q14151 953 aaKnown RBP eCLIP11.34□□□□□ -0.59
RPS27A-207ENST00000471772 NALCNQ8IZF0 1738 aa11.33□□□□□ -0.6
RPS27A-207ENST00000471772 HSPA1LP34931 641 aa11.33□□□□□ -0.6
RPS27A-207ENST00000471772 BRINP3Q76B58 766 aa11.33□□□□□ -0.6
RPS27A-207ENST00000471772 CARD11Q9BXL7 1154 aa11.33□□□□□ -0.6
RPS27A-207ENST00000471772 TRPM1Q7Z4N2 1603 aa11.33□□□□□ -0.6
RPS27A-207ENST00000471772 MST1RQ04912 1400 aa11.33□□□□□ -0.6
RPS27A-207ENST00000471772 MINK1Q8N4C8 1332 aaPredicted RBP11.32□□□□□ -0.6
RPS27A-207ENST00000471772 CENPJQ9HC77 1338 aaPredicted RBP11.32□□□□□ -0.6
RPS27A-207ENST00000471772 C1orf167Q5SNV9 1468 aa11.32□□□□□ -0.6
RPS27A-207ENST00000471772 WASLO00401 505 aaPredicted RBP11.31□□□□□ -0.6
RPS27A-207ENST00000471772 SLC24A1O60721 1099 aa11.31□□□□□ -0.6
RPS27A-207ENST00000471772 CDC42BPGQ6DT37 1551 aa11.31□□□□□ -0.6
RPS27A-207ENST00000471772 RALGAPBQ86X10 1494 aa11.31□□□□□ -0.6
RPS27A-207ENST00000471772 ARHGEF28Q8N1W1 1705 aaKnown RBP11.3□□□□□ -0.6
RPS27A-207ENST00000471772 ESCO1Q5FWF5 840 aa11.3□□□□□ -0.6
RPS27A-207ENST00000471772 ORAI2Q96SN7 254 aa11.3□□□□□ -0.6
RPS27A-207ENST00000471772 ROBO1Q9Y6N7 1651 aa11.3□□□□□ -0.6
RPS27A-207ENST00000471772 EIF3AQ14152 1382 aaKnown RBP11.29□□□□□ -0.6
RPS27A-207ENST00000471772 HIRIP3Q9BW71 556 aaPredicted RBP11.29□□□□□ -0.6
RPS27A-207ENST00000471772 CDK19Q9BWU1 502 aa11.29□□□□□ -0.6
RPS27A-207ENST00000471772 ANKARQ7Z5J8 1434 aa11.27□□□□□ -0.6
RPS27A-207ENST00000471772 NUTM2FA1L443 756 aa11.27□□□□□ -0.61
RPS27A-207ENST00000471772 LRRC59Q96AG4 307 aaKnown RBP11.27□□□□□ -0.61
RPS27A-207ENST00000471772 ADGRB2O60241 1585 aa11.27□□□□□ -0.61
RPS27A-207ENST00000471772 FMN2Q9NZ56 1722 aa11.26□□□□□ -0.61
RPS27A-207ENST00000471772 NUDT16Q96DE0 195 aaKnown RBP11.26□□□□□ -0.61
RPS27A-207ENST00000471772 PHF8Q9UPP1 1060 aa11.26□□□□□ -0.61
RPS27A-207ENST00000471772 CCDC61Q9Y6R9 512 aa11.26□□□□□ -0.61
RPS27A-207ENST00000471772 NPHP3Q7Z494 1330 aa11.26□□□□□ -0.61
RPS27A-207ENST00000471772 EVC2Q86UK5 1308 aa11.26□□□□□ -0.61
RPS27A-207ENST00000471772 RGPD8O14715 1765 aaPredicted RBP11.26□□□□□ -0.61
RPS27A-207ENST00000471772 FOXO3O43524 673 aa11.25□□□□□ -0.61
RPS27A-207ENST00000471772 PUS7Q96PZ0 661 aaKnown RBP11.25□□□□□ -0.61
RPS27A-207ENST00000471772 SOS2Q07890 1332 aaPredicted RBP11.25□□□□□ -0.61
RPS27A-207ENST00000471772 SBNO2Q9Y2G9 1366 aa11.25□□□□□ -0.61
RPS27A-207ENST00000471772 AHDC1Q5TGY3 1603 aaPredicted RBP11.24□□□□□ -0.61
RPS27A-207ENST00000471772 ST20-MTHFSA0A0A6YYL1 179 aa11.24□□□□□ -0.61
RPS27A-207ENST00000471772 SRPK2P78362 688 aaKnown RBP11.24□□□□□ -0.61
RPS27A-207ENST00000471772 PHLPP1O60346 1717 aa11.23□□□□□ -0.61
RPS27A-207ENST00000471772 PLEKHG3A1L390 1219 aa11.23□□□□□ -0.61
RPS27A-207ENST00000471772 PSME1Q06323 249 aa11.23□□□□□ -0.61
RPS27A-207ENST00000471772 DDX17Q92841 729 aaKnown RBP11.23□□□□□ -0.61
RPS27A-207ENST00000471772 PRR36Q9H6K5 1346 aa11.23□□□□□ -0.61
RPS27A-207ENST00000471772 KRT28Q7Z3Y7 464 aa11.22□□□□□ -0.61
RPS27A-207ENST00000471772 TESK2Q96S53 571 aa11.22□□□□□ -0.61
RPS27A-207ENST00000471772 QRICH2Q9H0J4 1663 aa11.22□□□□□ -0.61
RPS27A-207ENST00000471772 CABP2Q9NPB3 220 aa11.22□□□□□ -0.61
RPS27A-207ENST00000471772 TULP4Q9NRJ4 1543 aa11.22□□□□□ -0.61
RPS27A-207ENST00000471772 JCADQ9P266 1359 aa11.22□□□□□ -0.61
RPS27A-207ENST00000471772 NHSL1Q5SYE7 1610 aa11.21□□□□□ -0.61
RPS27A-207ENST00000471772 NGDNQ8NEJ9 315 aaKnown RBP11.21□□□□□ -0.61
RPS27A-207ENST00000471772 PMFBP1Q8TBY8 1022 aa11.21□□□□□ -0.61
RPS27A-207ENST00000471772 USP47Q96K76 1375 aa11.2□□□□□ -0.62
RPS27A-207ENST00000471772 KIF1AQ12756 1690 aa11.2□□□□□ -0.62
RPS27A-207ENST00000471772 COL16A1Q07092 1604 aaPredicted RBP11.2□□□□□ -0.62
RPS27A-207ENST00000471772 USP32Q8NFA0 1604 aa11.2□□□□□ -0.62
RPS27A-207ENST00000471772 SPATA31A6Q5VVP1 1343 aa11.19□□□□□ -0.62
RPS27A-207ENST00000471772 EIF4G2P78344 907 aaKnown RBP eCLIP11.19□□□□□ -0.62
RPS27A-207ENST00000471772 ZNF692Q9BU19 519 aaPredicted RBP11.19□□□□□ -0.62
RPS27A-207ENST00000471772 CABP1Q9NZU7 370 aa11.19□□□□□ -0.62
RPS27A-207ENST00000471772 ATP7BP35670 1465 aa11.19□□□□□ -0.62
RPS27A-207ENST00000471772 ITSN1Q15811 1721 aa11.18□□□□□ -0.62
RPS27A-207ENST00000471772 ACEP12821 1306 aa11.18□□□□□ -0.62
RPS27A-207ENST00000471772 SPATA31A3Q5VYP0 1347 aa11.18□□□□□ -0.62
RPS27A-207ENST00000471772 TMF1P82094 1093 aa11.18□□□□□ -0.62
RPS27A-207ENST00000471772 XPCQ01831 940 aaPredicted RBP11.18□□□□□ -0.62
RPS27A-207ENST00000471772 CDCA8Q53HL2 280 aa11.18□□□□□ -0.62
RPS27A-207ENST00000471772 PXDNQ92626 1479 aa11.18□□□□□ -0.62
RPS27A-207ENST00000471772 SBNO1A3KN83 1393 aa11.17□□□□□ -0.62
RPS27A-207ENST00000471772 POLR3AO14802 1390 aaPredicted RBP11.17□□□□□ -0.62
RPS27A-207ENST00000471772 ATAD2Q6PL18 1390 aa11.17□□□□□ -0.62
RPS27A-207ENST00000471772 BRD4O60885 1362 aaPredicted RBP11.16□□□□□ -0.62
RPS27A-207ENST00000471772 PPIP5K1Q6PFW1 1433 aa11.16□□□□□ -0.62
RPS27A-207ENST00000471772 PNPLA6Q8IY17 1366 aa11.16□□□□□ -0.62
RPS27A-207ENST00000471772 SHPRHQ149N8 1683 aa11.15□□□□□ -0.62
RPS27A-207ENST00000471772 HSPA5P11021 654 aaKnown RBP11.14□□□□□ -0.63
RPS27A-207ENST00000471772 ARHGEF10O15013 1369 aa11.14□□□□□ -0.63
RPS27A-207ENST00000471772 PAK3O75914 559 aaPredicted RBP11.13□□□□□ -0.63
RPS27A-207ENST00000471772 TMC1Q8TDI8 760 aa11.13□□□□□ -0.63
RPS27A-207ENST00000471772 SLC12A5Q9H2X9 1139 aa11.13□□□□□ -0.63
RPS27A-207ENST00000471772 TERF2IPQ9NYB0 399 aa11.13□□□□□ -0.63
RPS27A-207ENST00000471772 TOPAZ1Q8N9V7 1692 aa11.13□□□□□ -0.63
RPS27A-207ENST00000471772 NINLQ9Y2I6 1382 aa11.13□□□□□ -0.63
RPS27A-207ENST00000471772 TNS3Q68CZ2 1445 aa11.12□□□□□ -0.63
RPS27A-207ENST00000471772 NUTM2BA6NNL0 878 aaPredicted RBP11.12□□□□□ -0.63
RPS27A-207ENST00000471772 NUTM2EB1AL46 878 aaPredicted RBP11.12□□□□□ -0.63
RPS27A-207ENST00000471772 LMOD2Q6P5Q4 547 aa11.12□□□□□ -0.63
RPS27A-207ENST00000471772 NUTM2AQ8IVF1 878 aaPredicted RBP11.12□□□□□ -0.63
RPS27A-207ENST00000471772 CPSF1Q10570 1443 aaKnown RBP11.11□□□□□ -0.63
RPS27A-207ENST00000471772 HDGFL2Q7Z4V5 671 aaPredicted RBP11.11□□□□□ -0.63
RPS27A-207ENST00000471772 DISP3Q9P2K9 1392 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms