RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 THAP11Q96EK4 314 aa10.24□□□□□ -0.77
RBM39-228ENST00000471635 GPR37O15354 613 aa10.23□□□□□ -0.77
RBM39-228ENST00000471635 FECHP22830 423 aa10.23□□□□□ -0.77
RBM39-228ENST00000471635 GPIHBP1Q8IV16 184 aa10.23□□□□□ -0.77
RBM39-228ENST00000471635 GNPATO15228 680 aa10.22□□□□□ -0.77
RBM39-228ENST00000471635 FMNL1O95466 1100 aaPredicted RBP10.22□□□□□ -0.77
RBM39-228ENST00000471635 LORP23490 312 aaPredicted RBP10.21□□□□□ -0.77
RBM39-228ENST00000471635 MORN1Q5T089 497 aa10.21□□□□□ -0.77
RBM39-228ENST00000471635 NPAS3Q8IXF0 933 aa10.21□□□□□ -0.77
RBM39-228ENST00000471635 IRF7Q92985 503 aa10.21□□□□□ -0.77
RBM39-228ENST00000471635 NXF1Q9UBU9 619 aaKnown RBP10.21□□□□□ -0.77
RBM39-228ENST00000471635 GMPRP36959 345 aa10.2□□□□□ -0.78
RBM39-228ENST00000471635 FAM160A2Q8N612 972 aaPredicted RBP10.2□□□□□ -0.78
RBM39-228ENST00000471635 J3QL48 77 aa10.19□□□□□ -0.78
RBM39-228ENST00000471635 TULP1O00294 542 aaPredicted RBP10.19□□□□□ -0.78
RBM39-228ENST00000471635 OATP04181 439 aa10.19□□□□□ -0.78
RBM39-228ENST00000471635 TRIM32Q13049 653 aa10.19□□□□□ -0.78
RBM39-228ENST00000471635 SUZ12Q15022 739 aaKnown RBP10.19□□□□□ -0.78
RBM39-228ENST00000471635 PXYLP1Q8TE99 480 aa10.19□□□□□ -0.78
RBM39-228ENST00000471635 MRGPRX2Q96LB1 330 aa10.19□□□□□ -0.78
RBM39-228ENST00000471635 REPIN1Q9BWE0 567 aaKnown RBP10.19□□□□□ -0.78
RBM39-228ENST00000471635 SALL2Q9Y467 1007 aaPredicted RBP10.19□□□□□ -0.78
RBM39-228ENST00000471635 PRDM9Q9NQV7 894 aa10.18□□□□□ -0.78
RBM39-228ENST00000471635 MSS51Q4VC12 460 aa10.17□□□□□ -0.78
RBM39-228ENST00000471635 METTL3Q86U44 580 aaKnown RBP10.17□□□□□ -0.78
RBM39-228ENST00000471635 ATP6V1AP38606 617 aa10.16□□□□□ -0.78
RBM39-228ENST00000471635 HPS1Q92902 700 aa10.16□□□□□ -0.78
RBM39-228ENST00000471635 FUT2Q10981 343 aa10.15□□□□□ -0.78
RBM39-228ENST00000471635 SLC27A5Q9Y2P5 690 aa10.14□□□□□ -0.79
RBM39-228ENST00000471635 RDH13Q8NBN7 331 aa10.13□□□□□ -0.79
RBM39-228ENST00000471635 BRICD5Q6PL45 260 aa10.12□□□□□ -0.79
RBM39-228ENST00000471635 NLRP7Q8WX94 980 aa10.12□□□□□ -0.79
RBM39-228ENST00000471635 H3BM21 787 aa10.11□□□□□ -0.79
RBM39-228ENST00000471635 PHOX2BQ99453 314 aa10.08□□□□□ -0.8
RBM39-228ENST00000471635 MMP16P51512 607 aa10.07□□□□□ -0.8
RBM39-228ENST00000471635 DAXXQ9UER7 740 aaPredicted RBP10.07□□□□□ -0.8
RBM39-228ENST00000471635 MAP2K5Q13163 448 aa10.06□□□□□ -0.8
RBM39-228ENST00000471635 RNF19BQ6ZMZ0 732 aa10.06□□□□□ -0.8
RBM39-228ENST00000471635 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.06□□□□□ -0.8
RBM39-228ENST00000471635 DDX11L8A8MPP1 907 aa10.05□□□□□ -0.8
RBM39-228ENST00000471635 GCGRP47871 477 aa10.05□□□□□ -0.8
RBM39-228ENST00000471635 WNT7BP56706 349 aa10.05□□□□□ -0.8
RBM39-228ENST00000471635 ERBB4Q15303 1308 aa10.05□□□□□ -0.8
RBM39-228ENST00000471635 RC3H1Q5TC82 1133 aaKnown RBP10.04□□□□□ -0.8
RBM39-228ENST00000471635 VEGFBP49765 207 aa10.03□□□□□ -0.8
RBM39-228ENST00000471635 Q3C1V9 767 aa10.03□□□□□ -0.8
RBM39-228ENST00000471635 GRIPAP1Q4V328 841 aa10.03□□□□□ -0.8
RBM39-228ENST00000471635 SULF1Q8IWU6 871 aa10.03□□□□□ -0.8
RBM39-228ENST00000471635 ALDH1A1P00352 501 aa10.02□□□□□ -0.81
RBM39-228ENST00000471635 BMP1P13497 986 aa10.02□□□□□ -0.81
RBM39-228ENST00000471635 TRIM46Q7Z4K8 759 aa10.02□□□□□ -0.81
RBM39-228ENST00000471635 IRF6O14896 467 aa10.01□□□□□ -0.81
RBM39-228ENST00000471635 KCNMA1Q12791 1236 aa10.01□□□□□ -0.81
RBM39-228ENST00000471635 DXOO77932 396 aaKnown RBP10□□□□□ -0.81
RBM39-228ENST00000471635 MINK1Q8N4C8 1332 aaPredicted RBP10□□□□□ -0.81
RBM39-228ENST00000471635 CAPN5O15484 640 aaPredicted RBP9.99□□□□□ -0.81
RBM39-228ENST00000471635 CCDC102AQ96A19 550 aa9.99□□□□□ -0.81
RBM39-228ENST00000471635 SKOR1P84550 965 aa9.98□□□□□ -0.81
RBM39-228ENST00000471635 KCTD17Q8N5Z5 321 aa9.97□□□□□ -0.81
RBM39-228ENST00000471635 VSIG8P0DPA2 414 aa9.96□□□□□ -0.82
RBM39-228ENST00000471635 MDM2Q00987 491 aaPredicted RBP9.96□□□□□ -0.82
RBM39-228ENST00000471635 USB1Q9BQ65 265 aaKnown RBP9.95□□□□□ -0.82
RBM39-228ENST00000471635 KRI1Q8N9T8 703 aaKnown RBP9.94□□□□□ -0.82
RBM39-228ENST00000471635 WASF2Q9Y6W5 498 aa9.94□□□□□ -0.82
RBM39-228ENST00000471635 CCDC24Q8N4L8 307 aa9.93□□□□□ -0.82
RBM39-228ENST00000471635 GSK3AP49840 483 aa9.92□□□□□ -0.82
RBM39-228ENST00000471635 ZC3H15Q8WU90 426 aaKnown RBP9.92□□□□□ -0.82
RBM39-228ENST00000471635 TMEM151AQ8N4L1 468 aa9.91□□□□□ -0.82
RBM39-228ENST00000471635 ZFP42Q96MM3 310 aa9.91□□□□□ -0.82
RBM39-228ENST00000471635 SIAH2O43255 324 aa9.9□□□□□ -0.82
RBM39-228ENST00000471635 CD46P15529 392 aa9.9□□□□□ -0.82
RBM39-228ENST00000471635 BARGINQ6ZT62 677 aa9.9□□□□□ -0.82
RBM39-228ENST00000471635 ZMYND10O75800 440 aa9.89□□□□□ -0.83
RBM39-228ENST00000471635 EHBP1Q8NDI1 1231 aa9.89□□□□□ -0.83
RBM39-228ENST00000471635 RNF225M0QZC1 329 aaPredicted RBP9.88□□□□□ -0.83
RBM39-228ENST00000471635 CLCN1P35523 988 aa9.88□□□□□ -0.83
RBM39-228ENST00000471635 GPCPD1Q9NPB8 672 aa9.88□□□□□ -0.83
RBM39-228ENST00000471635 GDF11O95390 407 aa9.86□□□□□ -0.83
RBM39-228ENST00000471635 RASSF7Q02833 373 aa9.85□□□□□ -0.83
RBM39-228ENST00000471635 FAM217BQ9NTX9 383 aaPredicted RBP9.85□□□□□ -0.83
RBM39-228ENST00000471635 KDM4AO75164 1064 aa9.84□□□□□ -0.83
RBM39-228ENST00000471635 SCARF1Q14162 830 aa9.84□□□□□ -0.83
RBM39-228ENST00000471635 MRPL14Q6P1L8 145 aaKnown RBP9.83□□□□□ -0.84
RBM39-228ENST00000471635 TTLL12Q14166 644 aaPredicted RBP9.82□□□□□ -0.84
RBM39-228ENST00000471635 JUNDP17535 347 aa9.81□□□□□ -0.84
RBM39-228ENST00000471635 HLA-CQ95604 372 aa9.81□□□□□ -0.84
RBM39-228ENST00000471635 USP46P62068 366 aa9.8□□□□□ -0.84
RBM39-228ENST00000471635 HOXA2O43364 376 aa9.78□□□□□ -0.84
RBM39-228ENST00000471635 SLC24A1O60721 1099 aa9.78□□□□□ -0.84
RBM39-228ENST00000471635 SSTR3P32745 418 aaPredicted RBP9.78□□□□□ -0.84
RBM39-228ENST00000471635 GUCA2AQ02747 115 aa9.78□□□□□ -0.84
RBM39-228ENST00000471635 AMHR2Q16671 573 aa9.78□□□□□ -0.84
RBM39-228ENST00000471635 NUTM1Q86Y26 1132 aa9.78□□□□□ -0.84
RBM39-228ENST00000471635 PURBQ96QR8 312 aaKnown RBP9.78□□□□□ -0.84
RBM39-228ENST00000471635 NUDT12Q9BQG2 462 aa9.78□□□□□ -0.84
RBM39-228ENST00000471635 PLEKHG3A1L390 1219 aa9.77□□□□□ -0.85
RBM39-228ENST00000471635 GIGYF2Q6Y7W6 1299 aaKnown RBP9.77□□□□□ -0.85
RBM39-228ENST00000471635 IGHA1P01876 353 aa9.76□□□□□ -0.85
RBM39-228ENST00000471635 SOBPA7XYQ1 873 aa9.75□□□□□ -0.85
RBM39-228ENST00000471635 TRIM66O15016 1216 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms