RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 MYOM2P54296 1465 aa8.81□□□□□ -1
SPEN-204ENST00000471538 STAC3Q96MF2 364 aa8.8□□□□□ -1
SPEN-204ENST00000471538 MRS2Q9HD23 443 aa8.8□□□□□ -1
SPEN-204ENST00000471538 KTN1Q86UP2 1357 aaKnown RBP8.8□□□□□ -1
SPEN-204ENST00000471538 REREQ9P2R6 1566 aa8.8□□□□□ -1
SPEN-204ENST00000471538 MROH2AA6NES4 1674 aa8.8□□□□□ -1
SPEN-204ENST00000471538 KIF3BO15066 747 aa8.8□□□□□ -1
SPEN-204ENST00000471538 UGGT1Q9NYU2 1555 aa8.79□□□□□ -1
SPEN-204ENST00000471538 ZBED9Q6R2W3 1325 aa8.79□□□□□ -1
SPEN-204ENST00000471538 ADGRB3O60242 1522 aa8.79□□□□□ -1
SPEN-204ENST00000471538 KIF1BO60333 1816 aa8.79□□□□□ -1
SPEN-204ENST00000471538 NRXN1Q9ULB1 1477 aa8.79□□□□□ -1
SPEN-204ENST00000471538 SCUBE2Q9NQ36 999 aa8.78□□□□□ -1
SPEN-204ENST00000471538 ABCC3O15438 1527 aa8.77□□□□□ -1
SPEN-204ENST00000471538 SCAF11Q99590 1463 aaKnown RBP8.77□□□□□ -1.01
SPEN-204ENST00000471538 LRPPRCP42704 1394 aaKnown RBP8.77□□□□□ -1.01
SPEN-204ENST00000471538 PARD3Q8TEW0 1356 aa8.77□□□□□ -1.01
SPEN-204ENST00000471538 PER1O15534 1290 aaPredicted RBP8.77□□□□□ -1.01
SPEN-204ENST00000471538 FKBP8Q14318 412 aa8.77□□□□□ -1.01
SPEN-204ENST00000471538 POLR3GLQ9BT43 218 aa8.77□□□□□ -1.01
SPEN-204ENST00000471538 CCDC61Q9Y6R9 512 aa8.77□□□□□ -1.01
SPEN-204ENST00000471538 CAMSAP1Q5T5Y3 1602 aa8.77□□□□□ -1.01
SPEN-204ENST00000471538 ZNF335Q9H4Z2 1342 aaPredicted RBP8.76□□□□□ -1.01
SPEN-204ENST00000471538 BRD4O60885 1362 aaPredicted RBP8.76□□□□□ -1.01
SPEN-204ENST00000471538 FAM9BQ8IZU0 186 aa8.76□□□□□ -1.01
SPEN-204ENST00000471538 MYT1LQ9UL68 1186 aa8.76□□□□□ -1.01
SPEN-204ENST00000471538 NPATQ14207 1427 aa8.76□□□□□ -1.01
SPEN-204ENST00000471538 NCKAP5LQ9HCH0 1330 aa8.76□□□□□ -1.01
SPEN-204ENST00000471538 MYO3AQ8NEV4 1616 aa8.75□□□□□ -1.01
SPEN-204ENST00000471538 AGLP35573 1532 aa8.75□□□□□ -1.01
SPEN-204ENST00000471538 MYOM1P52179 1685 aa8.75□□□□□ -1.01
SPEN-204ENST00000471538 RALBP1Q15311 655 aa8.75□□□□□ -1.01
SPEN-204ENST00000471538 PNISRQ8TF01 805 aaKnown RBP8.75□□□□□ -1.01
SPEN-204ENST00000471538 MYBBP1AQ9BQG0 1328 aaKnown RBP8.75□□□□□ -1.01
SPEN-204ENST00000471538 PIK3C2BO00750 1634 aa8.75□□□□□ -1.01
SPEN-204ENST00000471538 PPLO60437 1756 aa8.75□□□□□ -1.01
SPEN-204ENST00000471538 ZC3H13Q5T200 1668 aaKnown RBP8.74□□□□□ -1.01
SPEN-204ENST00000471538 SYNMO15061 1565 aa8.74□□□□□ -1.01
SPEN-204ENST00000471538 UBAP1LF5GYI3 381 aa8.74□□□□□ -1.01
SPEN-204ENST00000471538 KIF12Q96FN5 646 aa8.74□□□□□ -1.01
SPEN-204ENST00000471538 WASHC2CQ9Y4E1 1318 aa8.74□□□□□ -1.01
SPEN-204ENST00000471538 MED1Q15648 1581 aaPredicted RBP8.74□□□□□ -1.01
SPEN-204ENST00000471538 SETBP1Q9Y6X0 1596 aa8.74□□□□□ -1.01
SPEN-204ENST00000471538 NOS1P29475 1434 aa8.73□□□□□ -1.01
SPEN-204ENST00000471538 TMF1P82094 1093 aa8.73□□□□□ -1.01
SPEN-204ENST00000471538 BMP2KQ9NSY1 1161 aaPredicted RBP8.73□□□□□ -1.01
SPEN-204ENST00000471538 NEFLP07196 543 aa8.72□□□□□ -1.01
SPEN-204ENST00000471538 TRPC6Q9Y210 931 aa8.72□□□□□ -1.01
SPEN-204ENST00000471538 ARHGAP31Q2M1Z3 1444 aa8.72□□□□□ -1.01
SPEN-204ENST00000471538 SMG6Q86US8 1419 aaKnown RBP8.72□□□□□ -1.01
SPEN-204ENST00000471538 ADGRF5Q8IZF2 1346 aa8.71□□□□□ -1.01
SPEN-204ENST00000471538 INSRP06213 1382 aa8.71□□□□□ -1.01
SPEN-204ENST00000471538 KDM5AP29375 1690 aaKnown RBP8.71□□□□□ -1.01
SPEN-204ENST00000471538 ZNF142P52746 1687 aaPredicted RBP8.71□□□□□ -1.01
SPEN-204ENST00000471538 PIK3C2GO75747 1445 aa8.71□□□□□ -1.02
SPEN-204ENST00000471538 ADGRB1O14514 1584 aa8.71□□□□□ -1.02
SPEN-204ENST00000471538 HSPA1LP34931 641 aa8.71□□□□□ -1.02
SPEN-204ENST00000471538 CDAN1Q8IWY9 1227 aa8.71□□□□□ -1.02
SPEN-204ENST00000471538 TSPYL2Q9H2G4 693 aaPredicted RBP8.71□□□□□ -1.02
SPEN-204ENST00000471538 EIF3AQ14152 1382 aaKnown RBP8.7□□□□□ -1.02
SPEN-204ENST00000471538 ALKQ9UM73 1620 aa8.7□□□□□ -1.02
SPEN-204ENST00000471538 NLRP13Q86W25 1043 aa8.7□□□□□ -1.02
SPEN-204ENST00000471538 BCANQ96GW7 911 aa8.7□□□□□ -1.02
SPEN-204ENST00000471538 PANK3Q9H999 370 aa8.7□□□□□ -1.02
SPEN-204ENST00000471538 SBNO2Q9Y2G9 1366 aa8.69□□□□□ -1.02
SPEN-204ENST00000471538 ERVK-7P63135 1459 aa8.69□□□□□ -1.02
SPEN-204ENST00000471538 CLTCQ00610 1675 aaKnown RBP8.69□□□□□ -1.02
SPEN-204ENST00000471538 ERICH6BQ5W0A0 696 aa8.69□□□□□ -1.02
SPEN-204ENST00000471538 TMC1Q8TDI8 760 aa8.69□□□□□ -1.02
SPEN-204ENST00000471538 ZMYM3Q14202 1370 aa8.69□□□□□ -1.02
SPEN-204ENST00000471538 NEXMIFQ5QGS0 1516 aa8.68□□□□□ -1.02
SPEN-204ENST00000471538 CFAP70Q5T0N1 1121 aa8.68□□□□□ -1.02
SPEN-204ENST00000471538 COLQQ9Y215 455 aaPredicted RBP8.68□□□□□ -1.02
SPEN-204ENST00000471538 RNF123Q5XPI4 1314 aa8.68□□□□□ -1.02
SPEN-204ENST00000471538 NPC1L1Q9UHC9 1359 aa8.68□□□□□ -1.02
SPEN-204ENST00000471538 BLMP54132 1417 aaPredicted RBP8.68□□□□□ -1.02
SPEN-204ENST00000471538 CEP170BQ9Y4F5 1589 aaPredicted RBP8.68□□□□□ -1.02
SPEN-204ENST00000471538 TIE1P35590 1138 aa8.67□□□□□ -1.02
SPEN-204ENST00000471538 CNGB1Q14028 1251 aaPredicted RBP8.67□□□□□ -1.02
SPEN-204ENST00000471538 CDCA8Q53HL2 280 aa8.67□□□□□ -1.02
SPEN-204ENST00000471538 RPGRIP1LQ68CZ1 1315 aa8.67□□□□□ -1.02
SPEN-204ENST00000471538 GGT6Q6P531 493 aa8.67□□□□□ -1.02
SPEN-204ENST00000471538 ASXL1Q8IXJ9 1541 aa8.67□□□□□ -1.02
SPEN-204ENST00000471538 PROM2Q8N271 834 aa8.67□□□□□ -1.02
SPEN-204ENST00000471538 TSHZ2Q9NRE2 1034 aa8.67□□□□□ -1.02
SPEN-204ENST00000471538 NUDCQ9Y266 331 aa8.67□□□□□ -1.02
SPEN-204ENST00000471538 AMER1Q5JTC6 1135 aaPredicted RBP8.66□□□□□ -1.02
SPEN-204ENST00000471538 ESF1Q9H501 851 aaKnown RBP8.66□□□□□ -1.02
SPEN-204ENST00000471538 CFAP65Q6ZU64 1925 aaKnown RBP8.66□□□□□ -1.02
SPEN-204ENST00000471538 QRICH2Q9H0J4 1663 aa8.66□□□□□ -1.02
SPEN-204ENST00000471538 SLC24A1O60721 1099 aa8.65□□□□□ -1.02
SPEN-204ENST00000471538 PIP4K2BP78356 416 aa8.65□□□□□ -1.02
SPEN-204ENST00000471538 C14orf93Q9H972 538 aaKnown RBP8.65□□□□□ -1.02
SPEN-204ENST00000471538 ZFYVE9O95405 1425 aa8.65□□□□□ -1.03
SPEN-204ENST00000471538 ARHGEF28Q8N1W1 1705 aaKnown RBP8.64□□□□□ -1.03
SPEN-204ENST00000471538 MAP3K13O43283 966 aa8.64□□□□□ -1.03
SPEN-204ENST00000471538 CC2D1BQ5T0F9 858 aaKnown RBP8.64□□□□□ -1.03
SPEN-204ENST00000471538 TMEM131LA2VDJ0 1609 aa8.64□□□□□ -1.03
SPEN-204ENST00000471538 MYO5BQ9ULV0 1848 aa8.63□□□□□ -1.03
SPEN-204ENST00000471538 IRX6P78412 446 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms