RNA–Protein interactions for RNA: ENST00000471459.1

HOXB3-206, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-206ENST00000471459 COL16A1Q07092 1604 aaPredicted RBP21.66■■□□□ 1.06
HOXB3-206ENST00000471459 NUTM2BA6NNL0 878 aaPredicted RBP21.66■■□□□ 1.06
HOXB3-206ENST00000471459 NUTM2EB1AL46 878 aaPredicted RBP21.66■■□□□ 1.06
HOXB3-206ENST00000471459 NUTM2AQ8IVF1 878 aaPredicted RBP21.66■■□□□ 1.06
HOXB3-206ENST00000471459 IFT172Q9UG01 1749 aa21.66■■□□□ 1.06
HOXB3-206ENST00000471459 NRXN1Q9ULB1 1477 aa21.65■■□□□ 1.06
HOXB3-206ENST00000471459 DDX17Q92841 729 aaKnown RBP21.65■■□□□ 1.06
HOXB3-206ENST00000471459 RGS17Q9UGC6 210 aaPredicted RBP21.65■■□□□ 1.06
HOXB3-206ENST00000471459 NALCNQ8IZF0 1738 aa21.65■■□□□ 1.06
HOXB3-206ENST00000471459 NUTM2FA1L443 756 aa21.62■■□□□ 1.05
HOXB3-206ENST00000471459 PRAM1Q96QH2 718 aa21.62■■□□□ 1.05
HOXB3-206ENST00000471459 NPHP3Q7Z494 1330 aa21.61■■□□□ 1.05
HOXB3-206ENST00000471459 ZNF772Q68DY9 489 aaPredicted RBP21.61■■□□□ 1.05
HOXB3-206ENST00000471459 SAFB2Q14151 953 aaKnown RBP eCLIP21.6■■□□□ 1.05
HOXB3-206ENST00000471459 PLEKHH1Q9ULM0 1364 aa21.6■■□□□ 1.05
HOXB3-206ENST00000471459 LAMC1P11047 1609 aa21.59■■□□□ 1.05
HOXB3-206ENST00000471459 FOXO3O43524 673 aa21.59■■□□□ 1.05
HOXB3-206ENST00000471459 TRAK1Q9UPV9 953 aa21.59■■□□□ 1.05
HOXB3-206ENST00000471459 SOS2Q07890 1332 aaPredicted RBP21.58■■□□□ 1.05
HOXB3-206ENST00000471459 POTEAQ6S8J7 498 aa21.58■■□□□ 1.05
HOXB3-206ENST00000471459 CDC42BPGQ6DT37 1551 aa21.57■■□□□ 1.04
HOXB3-206ENST00000471459 NHSL1Q5SYE7 1610 aa21.55■■□□□ 1.04
HOXB3-206ENST00000471459 SHPRHQ149N8 1683 aa21.54■■□□□ 1.04
HOXB3-206ENST00000471459 PNPLA6Q8IY17 1366 aa21.54■■□□□ 1.04
HOXB3-206ENST00000471459 KNDC1Q76NI1 1749 aa21.54■■□□□ 1.04
HOXB3-206ENST00000471459 PSME1Q06323 249 aa21.52■■□□□ 1.04
HOXB3-206ENST00000471459 LRP6O75581 1613 aa21.51■■□□□ 1.03
HOXB3-206ENST00000471459 NGLY1Q96IV0 654 aa21.51■■□□□ 1.03
HOXB3-206ENST00000471459 C8orf37Q96NL8 207 aa21.51■■□□□ 1.03
HOXB3-206ENST00000471459 PHF8Q9UPP1 1060 aa21.51■■□□□ 1.03
HOXB3-206ENST00000471459 DLC1Q96QB1 1528 aa21.5■■□□□ 1.03
HOXB3-206ENST00000471459 ADAMTS2O95450 1211 aa21.5■■□□□ 1.03
HOXB3-206ENST00000471459 XPCQ01831 940 aaPredicted RBP21.5■■□□□ 1.03
HOXB3-206ENST00000471459 KRT28Q7Z3Y7 464 aa21.49■■□□□ 1.03
HOXB3-206ENST00000471459 MINK1Q8N4C8 1332 aaPredicted RBP21.49■■□□□ 1.03
HOXB3-206ENST00000471459 EIF3AQ14152 1382 aaKnown RBP21.48■■□□□ 1.03
HOXB3-206ENST00000471459 RXRBP28702 533 aa21.48■■□□□ 1.03
HOXB3-206ENST00000471459 HIRIP3Q9BW71 556 aaPredicted RBP21.48■■□□□ 1.03
HOXB3-206ENST00000471459 AFF2P51816 1311 aa21.48■■□□□ 1.03
HOXB3-206ENST00000471459 NEUROD1Q13562 356 aa21.47■■□□□ 1.03
HOXB3-206ENST00000471459 ADGRB1O14514 1584 aa21.47■■□□□ 1.03
HOXB3-206ENST00000471459 TRIM26Q12899 539 aaPredicted RBP21.46■■□□□ 1.03
HOXB3-206ENST00000471459 WASLO00401 505 aaPredicted RBP21.45■■□□□ 1.02
HOXB3-206ENST00000471459 HAP1P54257 671 aaPredicted RBP21.43■■□□□ 1.02
HOXB3-206ENST00000471459 L3MBTL2Q969R5 705 aa21.43■■□□□ 1.02
HOXB3-206ENST00000471459 SIN3AQ96ST3 1273 aa21.43■■□□□ 1.02
HOXB3-206ENST00000471459 QTRT2Q9H974 415 aaKnown RBP21.43■■□□□ 1.02
HOXB3-206ENST00000471459 SPATA31A3Q5VYP0 1347 aa21.42■■□□□ 1.02
HOXB3-206ENST00000471459 LMOD2Q6P5Q4 547 aa21.42■■□□□ 1.02
HOXB3-206ENST00000471459 ANKARQ7Z5J8 1434 aa21.42■■□□□ 1.02
HOXB3-206ENST00000471459 PMFBP1Q8TBY8 1022 aa21.42■■□□□ 1.02
HOXB3-206ENST00000471459 FMN2Q9NZ56 1722 aa21.41■■□□□ 1.02
HOXB3-206ENST00000471459 PXDNQ92626 1479 aa21.41■■□□□ 1.02
HOXB3-206ENST00000471459 GPRASP1Q5JY77 1395 aa21.39■■□□□ 1.02
HOXB3-206ENST00000471459 NBPF1Q3BBV0 1214 aa21.39■■□□□ 1.01
HOXB3-206ENST00000471459 NGDNQ8NEJ9 315 aaKnown RBP21.39■■□□□ 1.01
HOXB3-206ENST00000471459 USP21Q9UK80 565 aa21.39■■□□□ 1.01
HOXB3-206ENST00000471459 KIF1AQ12756 1690 aa21.38■■□□□ 1.01
HOXB3-206ENST00000471459 RBM6P78332 1123 aaKnown RBP21.38■■□□□ 1.01
HOXB3-206ENST00000471459 FNBP4Q8N3X1 1017 aaPredicted RBP21.36■■□□□ 1.01
HOXB3-206ENST00000471459 NUDT16Q96DE0 195 aaKnown RBP21.36■■□□□ 1.01
HOXB3-206ENST00000471459 CDK19Q9BWU1 502 aa21.36■■□□□ 1.01
HOXB3-206ENST00000471459 TRPC5Q9UL62 973 aaPredicted RBP21.36■■□□□ 1.01
HOXB3-206ENST00000471459 SBNO1A3KN83 1393 aa21.36■■□□□ 1.01
HOXB3-206ENST00000471459 ARHGEF10O15013 1369 aa21.35■■□□□ 1.01
HOXB3-206ENST00000471459 ADGRB2O60241 1585 aa21.34■■□□□ 1.01
HOXB3-206ENST00000471459 PLEKHG5O94827 1062 aa21.33■■□□□ 1.01
HOXB3-206ENST00000471459 CENPJQ9HC77 1338 aaPredicted RBP21.32■■□□□ 1
HOXB3-206ENST00000471459 TNS3Q68CZ2 1445 aa21.32■■□□□ 1
HOXB3-206ENST00000471459 PAK3O75914 559 aaPredicted RBP21.32■■□□□ 1
HOXB3-206ENST00000471459 PRR36Q9H6K5 1346 aa21.31■■□□□ 1
HOXB3-206ENST00000471459 TULP4Q9NRJ4 1543 aa21.31■■□□□ 1
HOXB3-206ENST00000471459 COL22A1Q8NFW1 1626 aaPredicted RBP21.31■■□□□ 1
HOXB3-206ENST00000471459 CCDC61Q9Y6R9 512 aa21.31■■□□□ 1
HOXB3-206ENST00000471459 KIAA1210Q9ULL0 1709 aa21.31■■□□□ 1
HOXB3-206ENST00000471459 SRPK2P78362 688 aaKnown RBP21.3■■□□□ 1
HOXB3-206ENST00000471459 CDK12Q9NYV4 1490 aaPredicted RBP21.28■■□□□ 1
HOXB3-206ENST00000471459 CABLES1Q8TDN4 633 aa21.28■■□□□ 1
HOXB3-206ENST00000471459 ROCK2O75116 1388 aaKnown RBP21.27■■□□□ 1
HOXB3-206ENST00000471459 TONSLQ96HA7 1378 aa21.26■□□□□ 0.99
HOXB3-206ENST00000471459 RGPD8O14715 1765 aaPredicted RBP21.26■□□□□ 0.99
HOXB3-206ENST00000471459 UNC5CLQ8IV45 518 aa21.25■□□□□ 0.99
HOXB3-206ENST00000471459 ARHGEF28Q8N1W1 1705 aaKnown RBP21.25■□□□□ 0.99
HOXB3-206ENST00000471459 PLEKHG3A1L390 1219 aa21.24■□□□□ 0.99
HOXB3-206ENST00000471459 USP32Q8NFA0 1604 aa21.23■□□□□ 0.99
HOXB3-206ENST00000471459 NBPF8Q3BBV2 869 aa21.23■□□□□ 0.99
HOXB3-206ENST00000471459 EVC2Q86UK5 1308 aa21.23■□□□□ 0.99
HOXB3-206ENST00000471459 GJD4Q96KN9 370 aaPredicted RBP21.22■□□□□ 0.99
HOXB3-206ENST00000471459 ACEP12821 1306 aa21.22■□□□□ 0.99
HOXB3-206ENST00000471459 CABP2Q9NPB3 220 aa21.21■□□□□ 0.99
HOXB3-206ENST00000471459 ATP7BP35670 1465 aa21.2■□□□□ 0.98
HOXB3-206ENST00000471459 CCDC9Q9Y3X0 531 aaKnown RBP21.2■□□□□ 0.98
HOXB3-206ENST00000471459 ATRNO75882 1429 aa21.2■□□□□ 0.98
HOXB3-206ENST00000471459 BCL9LQ86UU0 1499 aa21.2■□□□□ 0.98
HOXB3-206ENST00000471459 UPF1Q92900 1129 aaKnown RBP eCLIP21.19■□□□□ 0.98
HOXB3-206ENST00000471459 CARD11Q9BXL7 1154 aa21.19■□□□□ 0.98
HOXB3-206ENST00000471459 FAM83GA6ND36 823 aa21.18■□□□□ 0.98
HOXB3-206ENST00000471459 POLR3AO14802 1390 aaPredicted RBP21.17■□□□□ 0.98
HOXB3-206ENST00000471459 RGS12O14924 1447 aa21.16■□□□□ 0.98
HOXB3-206ENST00000471459 ABTB2Q8N961 1025 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms