RNA–Protein interactions for RNA: ENST00000471046.1

LAMP1-202, Transcript of lysosomal associated membrane protein 1, humanhuman

TSL 3

Gene LAMP1, Length 424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-202ENST00000471046 PRAG1Q86YV5 1406 aa19.8■□□□□ 0.76
LAMP1-202ENST00000471046 BCL9LQ86UU0 1499 aa19.79■□□□□ 0.76
LAMP1-202ENST00000471046 CDC42BPGQ6DT37 1551 aa19.79■□□□□ 0.76
LAMP1-202ENST00000471046 ZNF326Q5BKZ1 582 aaKnown RBP19.79■□□□□ 0.76
LAMP1-202ENST00000471046 ORAI2Q96SN7 254 aa19.79■□□□□ 0.76
LAMP1-202ENST00000471046 PXDNQ92626 1479 aa19.79■□□□□ 0.76
LAMP1-202ENST00000471046 ROBO2Q9HCK4 1378 aa19.78■□□□□ 0.76
LAMP1-202ENST00000471046 FOXD1Q16676 465 aa19.74■□□□□ 0.75
LAMP1-202ENST00000471046 PLCH1Q4KWH8 1693 aa19.74■□□□□ 0.75
LAMP1-202ENST00000471046 ABCA3Q99758 1704 aa19.73■□□□□ 0.75
LAMP1-202ENST00000471046 USP32Q8NFA0 1604 aa19.73■□□□□ 0.75
LAMP1-202ENST00000471046 RGPD8O14715 1765 aaPredicted RBP19.71■□□□□ 0.75
LAMP1-202ENST00000471046 CCDC125Q86Z20 511 aa19.71■□□□□ 0.75
LAMP1-202ENST00000471046 KNDC1Q76NI1 1749 aa19.71■□□□□ 0.75
LAMP1-202ENST00000471046 FMN2Q9NZ56 1722 aa19.71■□□□□ 0.75
LAMP1-202ENST00000471046 HFM1A2PYH4 1435 aa19.7■□□□□ 0.74
LAMP1-202ENST00000471046 RALGAPBQ86X10 1494 aa19.7■□□□□ 0.74
LAMP1-202ENST00000471046 NWD2Q9ULI1 1742 aa19.7■□□□□ 0.74
LAMP1-202ENST00000471046 BLMP54132 1417 aaPredicted RBP19.69■□□□□ 0.74
LAMP1-202ENST00000471046 KIF1AQ12756 1690 aa19.68■□□□□ 0.74
LAMP1-202ENST00000471046 SLIT2O94813 1529 aa19.68■□□□□ 0.74
LAMP1-202ENST00000471046 IFT172Q9UG01 1749 aa19.68■□□□□ 0.74
LAMP1-202ENST00000471046 GJD4Q96KN9 370 aaPredicted RBP19.67■□□□□ 0.74
LAMP1-202ENST00000471046 NPHP3Q7Z494 1330 aa19.66■□□□□ 0.74
LAMP1-202ENST00000471046 XPCQ01831 940 aaPredicted RBP19.63■□□□□ 0.73
LAMP1-202ENST00000471046 NRAPQ86VF7 1730 aa19.62■□□□□ 0.73
LAMP1-202ENST00000471046 NAIPQ13075 1403 aa19.62■□□□□ 0.73
LAMP1-202ENST00000471046 ITGAEP38570 1179 aa19.62■□□□□ 0.73
LAMP1-202ENST00000471046 DEFB132Q7Z7B7 95 aa19.62■□□□□ 0.73
LAMP1-202ENST00000471046 ESCO1Q5FWF5 840 aa19.61■□□□□ 0.73
LAMP1-202ENST00000471046 RGPD1P0DJD0 1748 aa19.59■□□□□ 0.73
LAMP1-202ENST00000471046 UNC5CLQ8IV45 518 aa19.59■□□□□ 0.73
LAMP1-202ENST00000471046 VGFO15240 615 aaPredicted RBP19.58■□□□□ 0.72
LAMP1-202ENST00000471046 FOXO3O43524 673 aa19.58■□□□□ 0.72
LAMP1-202ENST00000471046 TNS1Q9HBL0 1735 aaKnown RBP19.58■□□□□ 0.72
LAMP1-202ENST00000471046 TECPR2O15040 1411 aa19.57■□□□□ 0.72
LAMP1-202ENST00000471046 LRPPRCP42704 1394 aaKnown RBP19.55■□□□□ 0.72
LAMP1-202ENST00000471046 SPATA31A3Q5VYP0 1347 aa19.54■□□□□ 0.72
LAMP1-202ENST00000471046 CCDC144AA2RUR9 1427 aa19.54■□□□□ 0.72
LAMP1-202ENST00000471046 NUTM2FA1L443 756 aa19.53■□□□□ 0.72
LAMP1-202ENST00000471046 RPGRIP1LQ68CZ1 1315 aa19.52■□□□□ 0.72
LAMP1-202ENST00000471046 SEPT12Q8IYM1 358 aa19.52■□□□□ 0.72
LAMP1-202ENST00000471046 TNS3Q68CZ2 1445 aa19.51■□□□□ 0.71
LAMP1-202ENST00000471046 PLEKHH1Q9ULM0 1364 aa19.51■□□□□ 0.71
LAMP1-202ENST00000471046 TRPM3Q9HCF6 1732 aaPredicted RBP19.51■□□□□ 0.71
LAMP1-202ENST00000471046 CRYBG1Q9Y4K1 1723 aa19.51■□□□□ 0.71
LAMP1-202ENST00000471046 RRBP1Q9P2E9 1410 aaKnown RBP19.51■□□□□ 0.71
LAMP1-202ENST00000471046 SF3B2Q13435 895 aaKnown RBP19.5■□□□□ 0.71
LAMP1-202ENST00000471046 VPS72Q15906 364 aa19.49■□□□□ 0.71
LAMP1-202ENST00000471046 WAPLQ7Z5K2 1190 aa19.49■□□□□ 0.71
LAMP1-202ENST00000471046 PSDA5PKW4 1024 aaPredicted RBP19.48■□□□□ 0.71
LAMP1-202ENST00000471046 ALS2Q96Q42 1657 aa19.48■□□□□ 0.71
LAMP1-202ENST00000471046 THSD7AQ9UPZ6 1657 aa19.47■□□□□ 0.71
LAMP1-202ENST00000471046 COL14A1Q05707 1796 aaKnown RBP19.47■□□□□ 0.71
LAMP1-202ENST00000471046 HRCP23327 699 aa19.46■□□□□ 0.71
LAMP1-202ENST00000471046 KRT27Q7Z3Y8 459 aa19.46■□□□□ 0.71
LAMP1-202ENST00000471046 ADGRF5Q8IZF2 1346 aa19.46■□□□□ 0.71
LAMP1-202ENST00000471046 ONECUT3O60422 494 aaPredicted RBP19.45■□□□□ 0.7
LAMP1-202ENST00000471046 NRXN1Q9ULB1 1477 aa19.44■□□□□ 0.7
LAMP1-202ENST00000471046 KRT28Q7Z3Y7 464 aa19.44■□□□□ 0.7
LAMP1-202ENST00000471046 CABLES1Q8TDN4 633 aa19.44■□□□□ 0.7
LAMP1-202ENST00000471046 STK26Q9P289 416 aa19.44■□□□□ 0.7
LAMP1-202ENST00000471046 ABCC11Q96J66 1382 aa19.44■□□□□ 0.7
LAMP1-202ENST00000471046 RREB1Q92766 1687 aa19.43■□□□□ 0.7
LAMP1-202ENST00000471046 PIK3C2GO75747 1445 aa19.42■□□□□ 0.7
LAMP1-202ENST00000471046 ADGRB2O60241 1585 aa19.42■□□□□ 0.7
LAMP1-202ENST00000471046 SPATA31E1Q6ZUB1 1445 aa19.42■□□□□ 0.7
LAMP1-202ENST00000471046 YTHDC2Q9H6S0 1430 aaKnown RBP19.42■□□□□ 0.7
LAMP1-202ENST00000471046 BAG6P46379 1132 aa19.41■□□□□ 0.7
LAMP1-202ENST00000471046 CCDC9Q9Y3X0 531 aaKnown RBP19.41■□□□□ 0.7
LAMP1-202ENST00000471046 NUP188Q5SRE5 1749 aa19.4■□□□□ 0.7
LAMP1-202ENST00000471046 HAP1P54257 671 aaPredicted RBP19.4■□□□□ 0.7
LAMP1-202ENST00000471046 SBNO1A3KN83 1393 aa19.4■□□□□ 0.7
LAMP1-202ENST00000471046 PLEKHG5O94827 1062 aa19.39■□□□□ 0.69
LAMP1-202ENST00000471046 DISP2A7MBM2 1401 aa19.39■□□□□ 0.69
LAMP1-202ENST00000471046 TMEM132EQ6IEE7 984 aa19.38■□□□□ 0.69
LAMP1-202ENST00000471046 PPARGC1BQ86YN6 1023 aaKnown RBP19.38■□□□□ 0.69
LAMP1-202ENST00000471046 ARHGEF10O15013 1369 aa19.37■□□□□ 0.69
LAMP1-202ENST00000471046 PHF8Q9UPP1 1060 aa19.37■□□□□ 0.69
LAMP1-202ENST00000471046 EN1Q05925 392 aaPredicted RBP19.36■□□□□ 0.69
LAMP1-202ENST00000471046 SLC4A1APQ9BWU0 796 aaKnown RBP19.36■□□□□ 0.69
LAMP1-202ENST00000471046 ANKRD30BQ9BXX2 1392 aa19.35■□□□□ 0.69
LAMP1-202ENST00000471046 A0A0G2JS52 829 aa19.35■□□□□ 0.69
LAMP1-202ENST00000471046 FAM83GA6ND36 823 aa19.35■□□□□ 0.69
LAMP1-202ENST00000471046 MYT1Q01538 1121 aa19.35■□□□□ 0.69
LAMP1-202ENST00000471046 FAM98CQ17RN3 349 aaKnown RBP19.35■□□□□ 0.69
LAMP1-202ENST00000471046 PHRF1Q9P1Y6 1649 aaKnown RBP19.35■□□□□ 0.69
LAMP1-202ENST00000471046 PSME1Q06323 249 aa19.33■□□□□ 0.68
LAMP1-202ENST00000471046 R3HDM1Q15032 1099 aaKnown RBP19.33■□□□□ 0.68
LAMP1-202ENST00000471046 FAM182BQ5T319 152 aa19.33■□□□□ 0.68
LAMP1-202ENST00000471046 RGL3Q3MIN7 710 aa19.31■□□□□ 0.68
LAMP1-202ENST00000471046 LMOD2Q6P5Q4 547 aa19.31■□□□□ 0.68
LAMP1-202ENST00000471046 DLC1Q96QB1 1528 aa19.3■□□□□ 0.68
LAMP1-202ENST00000471046 BTG4Q9NY30 223 aa19.3■□□□□ 0.68
LAMP1-202ENST00000471046 ANKARQ7Z5J8 1434 aa19.3■□□□□ 0.68
LAMP1-202ENST00000471046 ITSN1Q15811 1721 aa19.3■□□□□ 0.68
LAMP1-202ENST00000471046 SIRT1Q96EB6 747 aa19.28■□□□□ 0.68
LAMP1-202ENST00000471046 SPATA31A5Q5VU36 1347 aa19.27■□□□□ 0.68
LAMP1-202ENST00000471046 SPATA31A7Q8IWB4 1347 aa19.27■□□□□ 0.68
LAMP1-202ENST00000471046 EZH2Q15910 746 aaKnown RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms