RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 TBX22Q9Y458 520 aa9.61□□□□□ -0.87
VARS-222ENST00000470953 GOLGB1Q14789 3259 aaKnown RBP9.61□□□□□ -0.87
VARS-222ENST00000470953 CASZ1Q86V15 1759 aa9.6□□□□□ -0.87
VARS-222ENST00000470953 PTPRUQ92729 1446 aa9.6□□□□□ -0.87
VARS-222ENST00000470953 CCDC9Q9Y3X0 531 aaKnown RBP9.6□□□□□ -0.87
VARS-222ENST00000470953 DLC1Q96QB1 1528 aa9.6□□□□□ -0.87
VARS-222ENST00000470953 PARD3Q8TEW0 1356 aa9.6□□□□□ -0.87
VARS-222ENST00000470953 ZFYVE9O95405 1425 aa9.59□□□□□ -0.87
VARS-222ENST00000470953 ARHGAP31Q2M1Z3 1444 aa9.59□□□□□ -0.87
VARS-222ENST00000470953 ADAMTS13Q76LX8 1427 aa9.59□□□□□ -0.87
VARS-222ENST00000470953 PTGER2P43116 358 aa9.59□□□□□ -0.87
VARS-222ENST00000470953 WWC3Q9ULE0 1092 aa9.59□□□□□ -0.87
VARS-222ENST00000470953 TMEM131LA2VDJ0 1609 aa9.58□□□□□ -0.88
VARS-222ENST00000470953 TRIM37O94972 964 aa9.58□□□□□ -0.88
VARS-222ENST00000470953 APBA3O96018 575 aa9.58□□□□□ -0.88
VARS-222ENST00000470953 PDGFDQ9GZP0 370 aaPredicted RBP9.58□□□□□ -0.88
VARS-222ENST00000470953 AMOTL2Q9Y2J4 779 aa9.58□□□□□ -0.88
VARS-222ENST00000470953 C1orf167Q5SNV9 1468 aa9.58□□□□□ -0.88
VARS-222ENST00000470953 CCDC141Q6ZP82 1450 aa9.58□□□□□ -0.88
VARS-222ENST00000470953 ADGRL3Q9HAR2 1447 aa9.57□□□□□ -0.88
VARS-222ENST00000470953 ZBTB7AO95365 584 aa9.57□□□□□ -0.88
VARS-222ENST00000470953 FAM98CQ17RN3 349 aaKnown RBP9.57□□□□□ -0.88
VARS-222ENST00000470953 ORAI2Q96SN7 254 aa9.57□□□□□ -0.88
VARS-222ENST00000470953 NOS1P29475 1434 aa9.56□□□□□ -0.88
VARS-222ENST00000470953 TNS2Q63HR2 1409 aa9.56□□□□□ -0.88
VARS-222ENST00000470953 ATP10DQ9P241 1426 aa9.56□□□□□ -0.88
VARS-222ENST00000470953 EHBP1L1Q8N3D4 1523 aa9.56□□□□□ -0.88
VARS-222ENST00000470953 PLCH1Q4KWH8 1693 aa9.56□□□□□ -0.88
VARS-222ENST00000470953 FYCO1Q9BQS8 1478 aa9.56□□□□□ -0.88
VARS-222ENST00000470953 PCNTO95613 3336 aa9.56□□□□□ -0.88
VARS-222ENST00000470953 NALCNQ8IZF0 1738 aa9.56□□□□□ -0.88
VARS-222ENST00000470953 PIK3R4Q99570 1358 aa9.55□□□□□ -0.88
VARS-222ENST00000470953 APLP1P51693 650 aa9.55□□□□□ -0.88
VARS-222ENST00000470953 GPR162Q16538 588 aa9.55□□□□□ -0.88
VARS-222ENST00000470953 USP32Q8NFA0 1604 aa9.55□□□□□ -0.88
VARS-222ENST00000470953 EIF2AK4Q9P2K8 1649 aaKnown RBP9.55□□□□□ -0.88
VARS-222ENST00000470953 MYO5BQ9ULV0 1848 aa9.54□□□□□ -0.88
VARS-222ENST00000470953 MTUS2Q5JR59 1369 aa9.54□□□□□ -0.88
VARS-222ENST00000470953 PTPN23Q9H3S7 1636 aa9.54□□□□□ -0.88
VARS-222ENST00000470953 ATF5Q9Y2D1 282 aaPredicted RBP9.54□□□□□ -0.88
VARS-222ENST00000470953 RIMS2Q9UQ26 1411 aa9.54□□□□□ -0.88
VARS-222ENST00000470953 XRN1Q8IZH2 1706 aaKnown RBP9.53□□□□□ -0.88
VARS-222ENST00000470953 RPRD2Q5VT52 1461 aaKnown RBP9.53□□□□□ -0.88
VARS-222ENST00000470953 GPBP1L1Q9HC44 474 aaPredicted RBP9.53□□□□□ -0.88
VARS-222ENST00000470953 FAM161AQ3B820 660 aa9.52□□□□□ -0.89
VARS-222ENST00000470953 NWD2Q9ULI1 1742 aa9.52□□□□□ -0.89
VARS-222ENST00000470953 ANO8Q9HCE9 1232 aaPredicted RBP9.51□□□□□ -0.89
VARS-222ENST00000470953 PXDNQ92626 1479 aa9.51□□□□□ -0.89
VARS-222ENST00000470953 TSPY4P0CV99 314 aa9.5□□□□□ -0.89
VARS-222ENST00000470953 TSPY10P0CW01 314 aa9.5□□□□□ -0.89
VARS-222ENST00000470953 XPCQ01831 940 aaPredicted RBP9.5□□□□□ -0.89
VARS-222ENST00000470953 RSPH4AQ5TD94 716 aa9.5□□□□□ -0.89
VARS-222ENST00000470953 JMYQ8N9B5 988 aa9.5□□□□□ -0.89
VARS-222ENST00000470953 ZNF526Q8TF50 670 aaPredicted RBP9.5□□□□□ -0.89
VARS-222ENST00000470953 THSD7AQ9UPZ6 1657 aa9.5□□□□□ -0.89
VARS-222ENST00000470953 WDR90Q96KV7 1748 aa9.49□□□□□ -0.89
VARS-222ENST00000470953 PELP1Q8IZL8 1130 aaKnown RBP9.49□□□□□ -0.89
VARS-222ENST00000470953 CROCC2H7BZ55 1655 aa9.48□□□□□ -0.89
VARS-222ENST00000470953 GCC2Q8IWJ2 1684 aa9.48□□□□□ -0.89
VARS-222ENST00000470953 NRAPQ86VF7 1730 aa9.48□□□□□ -0.89
VARS-222ENST00000470953 KLRG1Q96E93 195 aa9.48□□□□□ -0.89
VARS-222ENST00000470953 SGIP1Q9BQI5 828 aa9.48□□□□□ -0.89
VARS-222ENST00000470953 AATKQ6ZMQ8 1374 aa9.48□□□□□ -0.89
VARS-222ENST00000470953 CEP162Q5TB80 1403 aa9.48□□□□□ -0.89
VARS-222ENST00000470953 ADGRL2O95490 1459 aa9.47□□□□□ -0.89
VARS-222ENST00000470953 ARHGEF5Q12774 1597 aa9.47□□□□□ -0.89
VARS-222ENST00000470953 HTRA3P83110 453 aa9.47□□□□□ -0.89
VARS-222ENST00000470953 FAM196AQ6ZSG2 479 aa9.46□□□□□ -0.9
VARS-222ENST00000470953 MAP3K5Q99683 1374 aa9.46□□□□□ -0.9
VARS-222ENST00000470953 NPHP3Q7Z494 1330 aa9.45□□□□□ -0.9
VARS-222ENST00000470953 NEXMIFQ5QGS0 1516 aa9.45□□□□□ -0.9
VARS-222ENST00000470953 KIF3CO14782 793 aa9.44□□□□□ -0.9
VARS-222ENST00000470953 HDGFP51858 240 aaKnown RBP9.44□□□□□ -0.9
VARS-222ENST00000470953 ARXQ96QS3 562 aa9.44□□□□□ -0.9
VARS-222ENST00000470953 ABCC5O15440 1437 aa9.43□□□□□ -0.9
VARS-222ENST00000470953 ADCY9O60503 1353 aa9.43□□□□□ -0.9
VARS-222ENST00000470953 FOXO3O43524 673 aa9.42□□□□□ -0.9
VARS-222ENST00000470953 PLEKHG5O94827 1062 aa9.42□□□□□ -0.9
VARS-222ENST00000470953 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.42□□□□□ -0.9
VARS-222ENST00000470953 CABLES1Q8TDN4 633 aa9.42□□□□□ -0.9
VARS-222ENST00000470953 SLC52A1Q9NWF4 448 aa9.42□□□□□ -0.9
VARS-222ENST00000470953 NRXN3Q9Y4C0 1643 aa9.42□□□□□ -0.9
VARS-222ENST00000470953 DUOX2Q9NRD8 1548 aa9.41□□□□□ -0.9
VARS-222ENST00000470953 HSPA1AP0DMV8 641 aaKnown RBP9.41□□□□□ -0.9
VARS-222ENST00000470953 HSPA1BP0DMV9 641 aaKnown RBP9.41□□□□□ -0.9
VARS-222ENST00000470953 YBX3P16989 372 aaKnown RBP eCLIP9.41□□□□□ -0.92e-9■■■■□ 26.4
VARS-222ENST00000470953 RRP7BPQ9NSQ0 103 aa9.41□□□□□ -0.9
VARS-222ENST00000470953 ABCA3Q99758 1704 aa9.41□□□□□ -0.9
VARS-222ENST00000470953 SPATA31A5Q5VU36 1347 aa9.4□□□□□ -0.9
VARS-222ENST00000470953 SPATA31A7Q8IWB4 1347 aa9.4□□□□□ -0.9
VARS-222ENST00000470953 CHGAP10645 457 aaKnown RBP9.4□□□□□ -0.9
VARS-222ENST00000470953 HAP1P54257 671 aaPredicted RBP9.4□□□□□ -0.9
VARS-222ENST00000470953 MTFR1LQ9H019 292 aa9.4□□□□□ -0.9
VARS-222ENST00000470953 KIAA1210Q9ULL0 1709 aa9.39□□□□□ -0.91
VARS-222ENST00000470953 METP08581 1390 aa9.39□□□□□ -0.91
VARS-222ENST00000470953 SPATA31A3Q5VYP0 1347 aa9.39□□□□□ -0.91
VARS-222ENST00000470953 ESCO1Q5FWF5 840 aa9.39□□□□□ -0.91
VARS-222ENST00000470953 KLHL34Q8N239 644 aa9.39□□□□□ -0.91
VARS-222ENST00000470953 KIF15Q9NS87 1388 aa9.38□□□□□ -0.91
VARS-222ENST00000470953 RGPD3A6NKT7 1758 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms