RNA–Protein interactions for RNA: ENST00000470951.5

SRGAP3-204, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-204ENST00000470951 TSPOAP1O95153 1857 aa14.47□□□□□ -0.09
SRGAP3-204ENST00000470951 SCAF11Q99590 1463 aaKnown RBP14.47□□□□□ -0.09
SRGAP3-204ENST00000470951 CLUAP1Q96AJ1 413 aa14.47□□□□□ -0.09
SRGAP3-204ENST00000470951 CNKSR2Q8WXI2 1034 aa14.46□□□□□ -0.09
SRGAP3-204ENST00000470951 KDM5AP29375 1690 aaKnown RBP14.46□□□□□ -0.09
SRGAP3-204ENST00000470951 UPF2Q9HAU5 1272 aaKnown RBP14.46□□□□□ -0.1
SRGAP3-204ENST00000470951 KIAA1210Q9ULL0 1709 aa14.45□□□□□ -0.1
SRGAP3-204ENST00000470951 IGHDP01880 384 aa14.45□□□□□ -0.1
SRGAP3-204ENST00000470951 POGKQ9P215 609 aa14.45□□□□□ -0.1
SRGAP3-204ENST00000470951 ANTXR1Q9H6X2 564 aa14.44□□□□□ -0.1
SRGAP3-204ENST00000470951 BCAR3O75815 825 aa14.44□□□□□ -0.1
SRGAP3-204ENST00000470951 CD109Q6YHK3 1445 aa14.44□□□□□ -0.1
SRGAP3-204ENST00000470951 CEP152O94986 1710 aa14.43□□□□□ -0.1
SRGAP3-204ENST00000470951 PMFBP1Q8TBY8 1022 aa14.43□□□□□ -0.1
SRGAP3-204ENST00000470951 ABCA9Q8IUA7 1624 aa14.43□□□□□ -0.1
SRGAP3-204ENST00000470951 APAF1O14727 1248 aa14.43□□□□□ -0.1
SRGAP3-204ENST00000470951 PRDM4Q9UKN5 801 aa14.43□□□□□ -0.1
SRGAP3-204ENST00000470951 GLI2P10070 1586 aa14.43□□□□□ -0.1
SRGAP3-204ENST00000470951 CENPJQ9HC77 1338 aaPredicted RBP14.43□□□□□ -0.1
SRGAP3-204ENST00000470951 DHX37Q8IY37 1157 aaKnown RBP14.42□□□□□ -0.1
SRGAP3-204ENST00000470951 CALD1Q05682 793 aaKnown RBP14.42□□□□□ -0.1
SRGAP3-204ENST00000470951 SPINK5Q9NQ38 1064 aaPredicted RBP14.42□□□□□ -0.1
SRGAP3-204ENST00000470951 MAP3K4Q9Y6R4 1608 aa14.41□□□□□ -0.1
SRGAP3-204ENST00000470951 TBC1D32Q96NH3 1257 aa14.41□□□□□ -0.1
SRGAP3-204ENST00000470951 ARHGAP5Q13017 1502 aa14.41□□□□□ -0.1
SRGAP3-204ENST00000470951 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.41□□□□□ -0.1
SRGAP3-204ENST00000470951 CCDC146Q8IYE0 955 aa14.4□□□□□ -0.1
SRGAP3-204ENST00000470951 TRPM2O94759 1503 aa14.4□□□□□ -0.1
SRGAP3-204ENST00000470951 SEC24BO95487 1268 aa14.4□□□□□ -0.11
SRGAP3-204ENST00000470951 NEURL4Q96JN8 1562 aa14.39□□□□□ -0.11
SRGAP3-204ENST00000470951 FSD2A1L4K1 749 aa14.38□□□□□ -0.11
SRGAP3-204ENST00000470951 CANXP27824 592 aaKnown RBP14.38□□□□□ -0.11
SRGAP3-204ENST00000470951 SLKQ9H2G2 1235 aaPredicted RBP14.38□□□□□ -0.11
SRGAP3-204ENST00000470951 POLR3AO14802 1390 aaPredicted RBP14.38□□□□□ -0.11
SRGAP3-204ENST00000470951 PAXIP1Q6ZW49 1069 aaPredicted RBP14.38□□□□□ -0.11
SRGAP3-204ENST00000470951 PPRC1Q5VV67 1664 aaKnown RBP14.38□□□□□ -0.11
SRGAP3-204ENST00000470951 GOLGA6L3A6NEY3 463 aa14.37□□□□□ -0.11
SRGAP3-204ENST00000470951 RRAGDQ9NQL2 400 aaPredicted RBP14.37□□□□□ -0.11
SRGAP3-204ENST00000470951 PLCH2O75038 1416 aa14.37□□□□□ -0.11
SRGAP3-204ENST00000470951 HSP90AA1P07900 732 aaKnown RBP14.36□□□□□ -0.11
SRGAP3-204ENST00000470951 TBC1D2Q9BYX2 928 aa14.36□□□□□ -0.11
SRGAP3-204ENST00000470951 COG6Q9Y2V7 657 aa14.36□□□□□ -0.11
SRGAP3-204ENST00000470951 WWC1Q8IX03 1113 aa14.36□□□□□ -0.11
SRGAP3-204ENST00000470951 CFAP44Q96MT7 982 aa14.36□□□□□ -0.11
SRGAP3-204ENST00000470951 ISY1Q9ULR0 285 aaKnown RBP14.36□□□□□ -0.11
SRGAP3-204ENST00000470951 PTPRTO14522 1441 aa14.35□□□□□ -0.11
SRGAP3-204ENST00000470951 MCM4P33991 863 aa14.35□□□□□ -0.11
SRGAP3-204ENST00000470951 CLCN1P35523 988 aa14.35□□□□□ -0.11
SRGAP3-204ENST00000470951 PANK1Q8TE04 598 aa14.35□□□□□ -0.11
SRGAP3-204ENST00000470951 FANCAO15360 1455 aa14.34□□□□□ -0.11
SRGAP3-204ENST00000470951 RWDD1Q9H446 243 aaPredicted RBP14.34□□□□□ -0.11
SRGAP3-204ENST00000470951 EFCAB2Q5VUJ9 269 aa14.33□□□□□ -0.11
SRGAP3-204ENST00000470951 XRCC6P12956 609 aaKnown RBP eCLIP14.33□□□□□ -0.12
SRGAP3-204ENST00000470951 CHMP5Q9NZZ3 219 aa14.33□□□□□ -0.12
SRGAP3-204ENST00000470951 CCDC9Q9Y3X0 531 aaKnown RBP14.33□□□□□ -0.12
SRGAP3-204ENST00000470951 SHPRHQ149N8 1683 aa14.33□□□□□ -0.12
SRGAP3-204ENST00000470951 KANK1Q14678 1352 aa14.32□□□□□ -0.12
SRGAP3-204ENST00000470951 RARSP54136 660 aaKnown RBP14.32□□□□□ -0.12
SRGAP3-204ENST00000470951 DMRT2Q9Y5R5 561 aa14.32□□□□□ -0.12
SRGAP3-204ENST00000470951 CLTCL1P53675 1640 aa14.32□□□□□ -0.12
SRGAP3-204ENST00000470951 WDR63Q8IWG1 891 aa14.32□□□□□ -0.12
SRGAP3-204ENST00000470951 FOXD4L1Q9NU39 408 aa14.32□□□□□ -0.12
SRGAP3-204ENST00000470951 ERVK-7P63135 1459 aa14.32□□□□□ -0.12
SRGAP3-204ENST00000470951 MRE11P49959 708 aa14.31□□□□□ -0.12
SRGAP3-204ENST00000470951 PNNQ9H307 717 aaKnown RBP14.31□□□□□ -0.12
SRGAP3-204ENST00000470951 PDZRN3Q9UPQ7 1066 aa14.31□□□□□ -0.12
SRGAP3-204ENST00000470951 IQSEC2Q5JU85 1478 aa14.31□□□□□ -0.12
SRGAP3-204ENST00000470951 MYO3AQ8NEV4 1616 aa14.31□□□□□ -0.12
SRGAP3-204ENST00000470951 TET3O43151 1660 aa14.31□□□□□ -0.12
SRGAP3-204ENST00000470951 SBNO2Q9Y2G9 1366 aa14.3□□□□□ -0.12
SRGAP3-204ENST00000470951 NAP1L2Q9ULW6 460 aaPredicted RBP14.3□□□□□ -0.12
SRGAP3-204ENST00000470951 DEPDC5O75140 1603 aa14.3□□□□□ -0.12
SRGAP3-204ENST00000470951 BRD2P25440 801 aaKnown RBP14.3□□□□□ -0.12
SRGAP3-204ENST00000470951 PCDHB15Q9Y5E8 787 aa14.3□□□□□ -0.12
SRGAP3-204ENST00000470951 MYOM2P54296 1465 aa14.29□□□□□ -0.12
SRGAP3-204ENST00000470951 DDX11L8A8MPP1 907 aa14.29□□□□□ -0.12
SRGAP3-204ENST00000470951 CCDC27Q2M243 656 aa14.29□□□□□ -0.12
SRGAP3-204ENST00000470951 RUNDC1Q96C34 613 aa14.29□□□□□ -0.12
SRGAP3-204ENST00000470951 RAPGEF3O95398 923 aa14.28□□□□□ -0.12
SRGAP3-204ENST00000470951 PPP4R3CPQ6ZMV5 832 aa14.28□□□□□ -0.12
SRGAP3-204ENST00000470951 ARAP3Q8WWN8 1544 aa14.28□□□□□ -0.12
SRGAP3-204ENST00000470951 RTEL1-TNFRSF6BF6WH68 1400 aa14.27□□□□□ -0.12
SRGAP3-204ENST00000470951 ADGRL1O94910 1474 aa14.27□□□□□ -0.12
SRGAP3-204ENST00000470951 TRAK2O60296 914 aa14.27□□□□□ -0.13
SRGAP3-204ENST00000470951 USP32Q8NFA0 1604 aa14.27□□□□□ -0.13
SRGAP3-204ENST00000470951 CT47B1P0C2W7 299 aaPredicted RBP14.26□□□□□ -0.13
SRGAP3-204ENST00000470951 ABCC1P33527 1531 aa14.26□□□□□ -0.13
SRGAP3-204ENST00000470951 NEO1Q92859 1461 aa14.26□□□□□ -0.13
SRGAP3-204ENST00000470951 CARD14Q9BXL6 1004 aa14.26□□□□□ -0.13
SRGAP3-204ENST00000470951 C22orf23Q9BZE7 217 aa14.26□□□□□ -0.13
SRGAP3-204ENST00000470951 HSP90B1P14625 803 aaKnown RBP14.26□□□□□ -0.13
SRGAP3-204ENST00000470951 ABCA6Q8N139 1617 aa14.25□□□□□ -0.13
SRGAP3-204ENST00000470951 RLBP1P12271 317 aa14.25□□□□□ -0.13
SRGAP3-204ENST00000470951 AFAP1Q8N556 730 aa14.25□□□□□ -0.13
SRGAP3-204ENST00000470951 NCOA3Q9Y6Q9 1424 aa14.25□□□□□ -0.13
SRGAP3-204ENST00000470951 MVPQ14764 893 aaKnown RBP14.25□□□□□ -0.13
SRGAP3-204ENST00000470951 IPO4Q8TEX9 1081 aaKnown RBP14.25□□□□□ -0.13
SRGAP3-204ENST00000470951 MYH16Q9H6N6 1097 aa14.25□□□□□ -0.13
SRGAP3-204ENST00000470951 PTMSP20962 102 aa14.24□□□□□ -0.13
SRGAP3-204ENST00000470951 NAP1L5Q96NT1 182 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms