RNA–Protein interactions for RNA: ENST00000470819.2

CDKN2A-204, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 856 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-204ENST00000470819 SOS2Q07890 1332 aaPredicted RBP21.02■□□□□ 0.95
CDKN2A-204ENST00000470819 ABCC11Q96J66 1382 aa21.01■□□□□ 0.95
CDKN2A-204ENST00000470819 ESCO1Q5FWF5 840 aa21.01■□□□□ 0.95
CDKN2A-204ENST00000470819 AFF2P51816 1311 aa21.01■□□□□ 0.95
CDKN2A-204ENST00000470819 PLEKHH1Q9ULM0 1364 aa21■□□□□ 0.95
CDKN2A-204ENST00000470819 C14orf93Q9H972 538 aaKnown RBP21■□□□□ 0.95
CDKN2A-204ENST00000470819 TECPR2O15040 1411 aa20.99■□□□□ 0.95
CDKN2A-204ENST00000470819 NUTM2FA1L443 756 aa20.99■□□□□ 0.95
CDKN2A-204ENST00000470819 CFAP70Q5T0N1 1121 aa20.99■□□□□ 0.95
CDKN2A-204ENST00000470819 C8orf37Q96NL8 207 aa20.99■□□□□ 0.95
CDKN2A-204ENST00000470819 YTHDC2Q9H6S0 1430 aaKnown RBP20.97■□□□□ 0.95
CDKN2A-204ENST00000470819 ADAMTS2O95450 1211 aa20.97■□□□□ 0.95
CDKN2A-204ENST00000470819 RXRBP28702 533 aa20.97■□□□□ 0.95
CDKN2A-204ENST00000470819 IFT172Q9UG01 1749 aa20.95■□□□□ 0.94
CDKN2A-204ENST00000470819 FOXO3O43524 673 aa20.95■□□□□ 0.94
CDKN2A-204ENST00000470819 XPCQ01831 940 aaPredicted RBP20.95■□□□□ 0.94
CDKN2A-204ENST00000470819 SIRT1Q96EB6 747 aa20.94■□□□□ 0.94
CDKN2A-204ENST00000470819 CDC42BPGQ6DT37 1551 aa20.93■□□□□ 0.94
CDKN2A-204ENST00000470819 NGLY1Q96IV0 654 aa20.93■□□□□ 0.94
CDKN2A-204ENST00000470819 QTRT2Q9H974 415 aaKnown RBP20.93■□□□□ 0.94
CDKN2A-204ENST00000470819 NPHP3Q7Z494 1330 aa20.93■□□□□ 0.94
CDKN2A-204ENST00000470819 NRXN1Q9ULB1 1477 aa20.93■□□□□ 0.94
CDKN2A-204ENST00000470819 DHX57Q6P158 1386 aaKnown RBP20.92■□□□□ 0.94
CDKN2A-204ENST00000470819 LAMC1P11047 1609 aa20.92■□□□□ 0.94
CDKN2A-204ENST00000470819 MYOM2P54296 1465 aa20.91■□□□□ 0.94
CDKN2A-204ENST00000470819 HRCP23327 699 aa20.9■□□□□ 0.94
CDKN2A-204ENST00000470819 SAFB2Q14151 953 aaKnown RBP eCLIP20.9■□□□□ 0.94
CDKN2A-204ENST00000470819 KDM2AQ9Y2K7 1162 aa20.9■□□□□ 0.94
CDKN2A-204ENST00000470819 PRAM1Q96QH2 718 aa20.89■□□□□ 0.93
CDKN2A-204ENST00000470819 DCAF11Q8TEB1 546 aa20.88■□□□□ 0.93
CDKN2A-204ENST00000470819 PXDNQ92626 1479 aa20.87■□□□□ 0.93
CDKN2A-204ENST00000470819 RBM6P78332 1123 aaKnown RBP20.86■□□□□ 0.93
CDKN2A-204ENST00000470819 UPF1Q92900 1129 aaKnown RBP eCLIP20.86■□□□□ 0.93
CDKN2A-204ENST00000470819 KNDC1Q76NI1 1749 aa20.85■□□□□ 0.93
CDKN2A-204ENST00000470819 POGKQ9P215 609 aa20.85■□□□□ 0.93
CDKN2A-204ENST00000470819 USP21Q9UK80 565 aa20.85■□□□□ 0.93
CDKN2A-204ENST00000470819 CDK12Q9NYV4 1490 aaPredicted RBP20.83■□□□□ 0.93
CDKN2A-204ENST00000470819 KRT28Q7Z3Y7 464 aa20.83■□□□□ 0.93
CDKN2A-204ENST00000470819 FNBP4Q8N3X1 1017 aaPredicted RBP20.83■□□□□ 0.93
CDKN2A-204ENST00000470819 PHF8Q9UPP1 1060 aa20.83■□□□□ 0.93
CDKN2A-204ENST00000470819 TRAK1Q9UPV9 953 aa20.83■□□□□ 0.93
CDKN2A-204ENST00000470819 SPATA31A3Q5VYP0 1347 aa20.8■□□□□ 0.92
CDKN2A-204ENST00000470819 FMN2Q9NZ56 1722 aa20.79■□□□□ 0.92
CDKN2A-204ENST00000470819 HIRIP3Q9BW71 556 aaPredicted RBP20.79■□□□□ 0.92
CDKN2A-204ENST00000470819 TRPC5Q9UL62 973 aaPredicted RBP20.79■□□□□ 0.92
CDKN2A-204ENST00000470819 RGS12O14924 1447 aa20.78■□□□□ 0.92
CDKN2A-204ENST00000470819 COL22A1Q8NFW1 1626 aaPredicted RBP20.78■□□□□ 0.92
CDKN2A-204ENST00000470819 ADGRB1O14514 1584 aa20.78■□□□□ 0.92
CDKN2A-204ENST00000470819 STAC3Q96MF2 364 aa20.78■□□□□ 0.92
CDKN2A-204ENST00000470819 DLC1Q96QB1 1528 aa20.78■□□□□ 0.92
CDKN2A-204ENST00000470819 PSME1Q06323 249 aa20.77■□□□□ 0.92
CDKN2A-204ENST00000470819 MINK1Q8N4C8 1332 aaPredicted RBP20.77■□□□□ 0.91
CDKN2A-204ENST00000470819 PMFBP1Q8TBY8 1022 aa20.76■□□□□ 0.91
CDKN2A-204ENST00000470819 PLEKHG5O94827 1062 aa20.74■□□□□ 0.91
CDKN2A-204ENST00000470819 BCL9LQ86UU0 1499 aa20.74■□□□□ 0.91
CDKN2A-204ENST00000470819 ATRNO75882 1429 aa20.73■□□□□ 0.91
CDKN2A-204ENST00000470819 LMOD2Q6P5Q4 547 aa20.73■□□□□ 0.91
CDKN2A-204ENST00000470819 CABLES1Q8TDN4 633 aa20.73■□□□□ 0.91
CDKN2A-204ENST00000470819 KIF1AQ12756 1690 aa20.72■□□□□ 0.91
CDKN2A-204ENST00000470819 WASLO00401 505 aaPredicted RBP20.71■□□□□ 0.91
CDKN2A-204ENST00000470819 TNS3Q68CZ2 1445 aa20.7■□□□□ 0.9
CDKN2A-204ENST00000470819 ANKARQ7Z5J8 1434 aa20.7■□□□□ 0.9
CDKN2A-204ENST00000470819 HAP1P54257 671 aaPredicted RBP20.7■□□□□ 0.9
CDKN2A-204ENST00000470819 PRR36Q9H6K5 1346 aa20.7■□□□□ 0.9
CDKN2A-204ENST00000470819 SBNO1A3KN83 1393 aa20.7■□□□□ 0.9
CDKN2A-204ENST00000470819 GJD4Q96KN9 370 aaPredicted RBP20.69■□□□□ 0.9
CDKN2A-204ENST00000470819 UNC5CLQ8IV45 518 aa20.68■□□□□ 0.9
CDKN2A-204ENST00000470819 RGPD8O14715 1765 aaPredicted RBP20.67■□□□□ 0.9
CDKN2A-204ENST00000470819 ADGRB2O60241 1585 aa20.66■□□□□ 0.9
CDKN2A-204ENST00000470819 USP32Q8NFA0 1604 aa20.66■□□□□ 0.9
CDKN2A-204ENST00000470819 ARHGEF10O15013 1369 aa20.65■□□□□ 0.9
CDKN2A-204ENST00000470819 SLIT2O94813 1529 aa20.64■□□□□ 0.9
CDKN2A-204ENST00000470819 EIF3AQ14152 1382 aaKnown RBP20.64■□□□□ 0.89
CDKN2A-204ENST00000470819 NBPF1Q3BBV0 1214 aa20.64■□□□□ 0.89
CDKN2A-204ENST00000470819 GPRASP1Q5JY77 1395 aa20.63■□□□□ 0.89
CDKN2A-204ENST00000470819 ATAD2Q6PL18 1390 aa20.63■□□□□ 0.89
CDKN2A-204ENST00000470819 NGDNQ8NEJ9 315 aaKnown RBP20.63■□□□□ 0.89
CDKN2A-204ENST00000470819 NUDT16Q96DE0 195 aaKnown RBP20.62■□□□□ 0.89
CDKN2A-204ENST00000470819 TULP4Q9NRJ4 1543 aa20.62■□□□□ 0.89
CDKN2A-204ENST00000470819 FAM83GA6ND36 823 aa20.61■□□□□ 0.89
CDKN2A-204ENST00000470819 CDK19Q9BWU1 502 aa20.61■□□□□ 0.89
CDKN2A-204ENST00000470819 MARF1Q9Y4F3 1742 aaKnown RBP20.6■□□□□ 0.89
CDKN2A-204ENST00000470819 RALGAPBQ86X10 1494 aa20.6■□□□□ 0.89
CDKN2A-204ENST00000470819 PAK3O75914 559 aaPredicted RBP20.59■□□□□ 0.89
CDKN2A-204ENST00000470819 VPS72Q15906 364 aa20.58■□□□□ 0.89
CDKN2A-204ENST00000470819 CCDC9Q9Y3X0 531 aaKnown RBP20.57■□□□□ 0.88
CDKN2A-204ENST00000470819 L3MBTL2Q969R5 705 aa20.56■□□□□ 0.88
CDKN2A-204ENST00000470819 SIN3AQ96ST3 1273 aa20.56■□□□□ 0.88
CDKN2A-204ENST00000470819 ATP7BP35670 1465 aa20.55■□□□□ 0.88
CDKN2A-204ENST00000470819 GLI3P10071 1580 aa20.55■□□□□ 0.88
CDKN2A-204ENST00000470819 ARHGEF28Q8N1W1 1705 aaKnown RBP20.54■□□□□ 0.88
CDKN2A-204ENST00000470819 SEPT12Q8IYM1 358 aa20.54■□□□□ 0.88
CDKN2A-204ENST00000470819 TRPM3Q9HCF6 1732 aaPredicted RBP20.53■□□□□ 0.88
CDKN2A-204ENST00000470819 BTG4Q9NY30 223 aa20.53■□□□□ 0.88
CDKN2A-204ENST00000470819 CCDC61Q9Y6R9 512 aa20.53■□□□□ 0.88
CDKN2A-204ENST00000470819 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.52■□□□□ 0.88
CDKN2A-204ENST00000470819 ACEP12821 1306 aa20.52■□□□□ 0.87
CDKN2A-204ENST00000470819 MSH5O43196 834 aa20.51■□□□□ 0.87
CDKN2A-204ENST00000470819 ONECUT3O60422 494 aaPredicted RBP20.51■□□□□ 0.87
CDKN2A-204ENST00000470819 NEUROD1Q13562 356 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms