RNA–Protein interactions for RNA: ENST00000470771.1

ABCA4-204, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 3

Gene ABCA4, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-204ENST00000470771 SHPRHQ149N8 1683 aa20.07■□□□□ 0.8
ABCA4-204ENST00000470771 DHX57Q6P158 1386 aaKnown RBP20.07■□□□□ 0.8
ABCA4-204ENST00000470771 STAC3Q96MF2 364 aa20.06■□□□□ 0.8
ABCA4-204ENST00000470771 TECPR2O15040 1411 aa20.05■□□□□ 0.8
ABCA4-204ENST00000470771 NPHP3Q7Z494 1330 aa20.04■□□□□ 0.8
ABCA4-204ENST00000470771 CFAP70Q5T0N1 1121 aa20.04■□□□□ 0.8
ABCA4-204ENST00000470771 LRP6O75581 1613 aa20.04■□□□□ 0.8
ABCA4-204ENST00000470771 SOS2Q07890 1332 aaPredicted RBP20.03■□□□□ 0.8
ABCA4-204ENST00000470771 YTHDC2Q9H6S0 1430 aaKnown RBP20.03■□□□□ 0.8
ABCA4-204ENST00000470771 NHSL1Q5SYE7 1610 aa20.03■□□□□ 0.8
ABCA4-204ENST00000470771 RXRBP28702 533 aa20.02■□□□□ 0.8
ABCA4-204ENST00000470771 PNPLA6Q8IY17 1366 aa20.01■□□□□ 0.79
ABCA4-204ENST00000470771 C8orf37Q96NL8 207 aa20.01■□□□□ 0.79
ABCA4-204ENST00000470771 IFT172Q9UG01 1749 aa20.01■□□□□ 0.79
ABCA4-204ENST00000470771 MYOM2P54296 1465 aa20■□□□□ 0.79
ABCA4-204ENST00000470771 NUTM2FA1L443 756 aa20■□□□□ 0.79
ABCA4-204ENST00000470771 FOXO3O43524 673 aa20■□□□□ 0.79
ABCA4-204ENST00000470771 DCAF11Q8TEB1 546 aa20■□□□□ 0.79
ABCA4-204ENST00000470771 NGLY1Q96IV0 654 aa20■□□□□ 0.79
ABCA4-204ENST00000470771 POGKQ9P215 609 aa20■□□□□ 0.79
ABCA4-204ENST00000470771 KDM2AQ9Y2K7 1162 aa20■□□□□ 0.79
ABCA4-204ENST00000470771 AFF2P51816 1311 aa20■□□□□ 0.79
ABCA4-204ENST00000470771 CDC42BPGQ6DT37 1551 aa20■□□□□ 0.79
ABCA4-204ENST00000470771 NRXN1Q9ULB1 1477 aa19.99■□□□□ 0.79
ABCA4-204ENST00000470771 ADAMTS2O95450 1211 aa19.98■□□□□ 0.79
ABCA4-204ENST00000470771 PRAM1Q96QH2 718 aa19.97■□□□□ 0.79
ABCA4-204ENST00000470771 PLEKHH1Q9ULM0 1364 aa19.95■□□□□ 0.79
ABCA4-204ENST00000470771 QTRT2Q9H974 415 aaKnown RBP19.95■□□□□ 0.78
ABCA4-204ENST00000470771 LAMC1P11047 1609 aa19.94■□□□□ 0.78
ABCA4-204ENST00000470771 SAFB2Q14151 953 aaKnown RBP eCLIP19.94■□□□□ 0.78
ABCA4-204ENST00000470771 PSME1Q06323 249 aa19.93■□□□□ 0.78
ABCA4-204ENST00000470771 KNDC1Q76NI1 1749 aa19.93■□□□□ 0.78
ABCA4-204ENST00000470771 RBM6P78332 1123 aaKnown RBP19.92■□□□□ 0.78
ABCA4-204ENST00000470771 XPCQ01831 940 aaPredicted RBP19.92■□□□□ 0.78
ABCA4-204ENST00000470771 TRAK1Q9UPV9 953 aa19.92■□□□□ 0.78
ABCA4-204ENST00000470771 PHF8Q9UPP1 1060 aa19.91■□□□□ 0.78
ABCA4-204ENST00000470771 KRT28Q7Z3Y7 464 aa19.9■□□□□ 0.78
ABCA4-204ENST00000470771 USP21Q9UK80 565 aa19.9■□□□□ 0.78
ABCA4-204ENST00000470771 FNBP4Q8N3X1 1017 aaPredicted RBP19.87■□□□□ 0.77
ABCA4-204ENST00000470771 TRPC5Q9UL62 973 aaPredicted RBP19.87■□□□□ 0.77
ABCA4-204ENST00000470771 DLC1Q96QB1 1528 aa19.86■□□□□ 0.77
ABCA4-204ENST00000470771 PXDNQ92626 1479 aa19.86■□□□□ 0.77
ABCA4-204ENST00000470771 CDK12Q9NYV4 1490 aaPredicted RBP19.86■□□□□ 0.77
ABCA4-204ENST00000470771 EIF3AQ14152 1382 aaKnown RBP19.86■□□□□ 0.77
ABCA4-204ENST00000470771 SPATA31A3Q5VYP0 1347 aa19.86■□□□□ 0.77
ABCA4-204ENST00000470771 HAP1P54257 671 aaPredicted RBP19.85■□□□□ 0.77
ABCA4-204ENST00000470771 FMN2Q9NZ56 1722 aa19.84■□□□□ 0.77
ABCA4-204ENST00000470771 MINK1Q8N4C8 1332 aaPredicted RBP19.83■□□□□ 0.77
ABCA4-204ENST00000470771 HIRIP3Q9BW71 556 aaPredicted RBP19.83■□□□□ 0.77
ABCA4-204ENST00000470771 ANKARQ7Z5J8 1434 aa19.83■□□□□ 0.76
ABCA4-204ENST00000470771 KIF1AQ12756 1690 aa19.82■□□□□ 0.76
ABCA4-204ENST00000470771 LMOD2Q6P5Q4 547 aa19.82■□□□□ 0.76
ABCA4-204ENST00000470771 ADGRB1O14514 1584 aa19.82■□□□□ 0.76
ABCA4-204ENST00000470771 COL22A1Q8NFW1 1626 aaPredicted RBP19.81■□□□□ 0.76
ABCA4-204ENST00000470771 WASLO00401 505 aaPredicted RBP19.81■□□□□ 0.76
ABCA4-204ENST00000470771 PMFBP1Q8TBY8 1022 aa19.81■□□□□ 0.76
ABCA4-204ENST00000470771 UPF1Q92900 1129 aaKnown RBP eCLIP19.8■□□□□ 0.76
ABCA4-204ENST00000470771 SBNO1A3KN83 1393 aa19.79■□□□□ 0.76
ABCA4-204ENST00000470771 ARHGEF10O15013 1369 aa19.79■□□□□ 0.76
ABCA4-204ENST00000470771 GPRASP1Q5JY77 1395 aa19.79■□□□□ 0.76
ABCA4-204ENST00000470771 NGDNQ8NEJ9 315 aaKnown RBP19.77■□□□□ 0.76
ABCA4-204ENST00000470771 TNS3Q68CZ2 1445 aa19.76■□□□□ 0.75
ABCA4-204ENST00000470771 UNC5CLQ8IV45 518 aa19.75■□□□□ 0.75
ABCA4-204ENST00000470771 PLEKHG5O94827 1062 aa19.74■□□□□ 0.75
ABCA4-204ENST00000470771 GJD4Q96KN9 370 aaPredicted RBP19.74■□□□□ 0.75
ABCA4-204ENST00000470771 ATRNO75882 1429 aa19.74■□□□□ 0.75
ABCA4-204ENST00000470771 ADGRB2O60241 1585 aa19.74■□□□□ 0.75
ABCA4-204ENST00000470771 RGS12O14924 1447 aa19.73■□□□□ 0.75
ABCA4-204ENST00000470771 PAK3O75914 559 aaPredicted RBP19.72■□□□□ 0.75
ABCA4-204ENST00000470771 CABLES1Q8TDN4 633 aa19.72■□□□□ 0.75
ABCA4-204ENST00000470771 NUDT16Q96DE0 195 aaKnown RBP19.72■□□□□ 0.75
ABCA4-204ENST00000470771 BCL9LQ86UU0 1499 aa19.72■□□□□ 0.75
ABCA4-204ENST00000470771 RGPD8O14715 1765 aaPredicted RBP19.71■□□□□ 0.75
ABCA4-204ENST00000470771 CDK19Q9BWU1 502 aa19.71■□□□□ 0.75
ABCA4-204ENST00000470771 TULP4Q9NRJ4 1543 aa19.71■□□□□ 0.75
ABCA4-204ENST00000470771 ATAD2Q6PL18 1390 aa19.7■□□□□ 0.74
ABCA4-204ENST00000470771 PRR36Q9H6K5 1346 aa19.7■□□□□ 0.74
ABCA4-204ENST00000470771 CCDC61Q9Y6R9 512 aa19.69■□□□□ 0.74
ABCA4-204ENST00000470771 NBPF1Q3BBV0 1214 aa19.68■□□□□ 0.74
ABCA4-204ENST00000470771 L3MBTL2Q969R5 705 aa19.68■□□□□ 0.74
ABCA4-204ENST00000470771 NEUROD1Q13562 356 aa19.67■□□□□ 0.74
ABCA4-204ENST00000470771 CCDC9Q9Y3X0 531 aaKnown RBP19.67■□□□□ 0.74
ABCA4-204ENST00000470771 MARF1Q9Y4F3 1742 aaKnown RBP19.66■□□□□ 0.74
ABCA4-204ENST00000470771 USP32Q8NFA0 1604 aa19.65■□□□□ 0.74
ABCA4-204ENST00000470771 KIAA1210Q9ULL0 1709 aa19.65■□□□□ 0.74
ABCA4-204ENST00000470771 FAM83GA6ND36 823 aa19.65■□□□□ 0.74
ABCA4-204ENST00000470771 VPS72Q15906 364 aa19.65■□□□□ 0.74
ABCA4-204ENST00000470771 CCDC125Q86Z20 511 aa19.65■□□□□ 0.74
ABCA4-204ENST00000470771 CENPJQ9HC77 1338 aaPredicted RBP19.65■□□□□ 0.74
ABCA4-204ENST00000470771 SLIT2O94813 1529 aa19.65■□□□□ 0.74
ABCA4-204ENST00000470771 SRPK2P78362 688 aaKnown RBP19.64■□□□□ 0.73
ABCA4-204ENST00000470771 SIN3AQ96ST3 1273 aa19.63■□□□□ 0.73
ABCA4-204ENST00000470771 EP400Q96L91 3159 aa19.63■□□□□ 0.73
ABCA4-204ENST00000470771 PLEKHG3A1L390 1219 aa19.62■□□□□ 0.73
ABCA4-204ENST00000470771 NBPF8Q3BBV2 869 aa19.62■□□□□ 0.73
ABCA4-204ENST00000470771 ARHGEF28Q8N1W1 1705 aaKnown RBP19.62■□□□□ 0.73
ABCA4-204ENST00000470771 ACEP12821 1306 aa19.6■□□□□ 0.73
ABCA4-204ENST00000470771 BTG4Q9NY30 223 aa19.6■□□□□ 0.73
ABCA4-204ENST00000470771 ATP7BP35670 1465 aa19.6■□□□□ 0.73
ABCA4-204ENST00000470771 RALGAPBQ86X10 1494 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms