RNA–Protein interactions for RNA: ENST00000470695.1

IFT88-205, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-205ENST00000470695 DDX10Q13206 875 aaKnown RBP17.35■□□□□ 0.37
IFT88-205ENST00000470695 EVC2Q86UK5 1308 aa17.35■□□□□ 0.37
IFT88-205ENST00000470695 KCNA6P17658 529 aa17.34■□□□□ 0.37
IFT88-205ENST00000470695 NWD1Q149M9 1564 aa17.34■□□□□ 0.37
IFT88-205ENST00000470695 WAPLQ7Z5K2 1190 aa17.34■□□□□ 0.37
IFT88-205ENST00000470695 PLEKHH1Q9ULM0 1364 aa17.34■□□□□ 0.37
IFT88-205ENST00000470695 TULP4Q9NRJ4 1543 aa17.31■□□□□ 0.36
IFT88-205ENST00000470695 SAFB2Q14151 953 aaKnown RBP eCLIP17.31■□□□□ 0.36
IFT88-205ENST00000470695 DMRT2Q9Y5R5 561 aa17.31■□□□□ 0.36
IFT88-205ENST00000470695 MINK1Q8N4C8 1332 aaPredicted RBP17.3■□□□□ 0.36
IFT88-205ENST00000470695 ADGRB2O60241 1585 aa17.3■□□□□ 0.36
IFT88-205ENST00000470695 POLR3GLQ9BT43 218 aa17.29■□□□□ 0.36
IFT88-205ENST00000470695 NKTRP30414 1462 aaKnown RBP17.29■□□□□ 0.36
IFT88-205ENST00000470695 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.27■□□□□ 0.35
IFT88-205ENST00000470695 ATAD2Q6PL18 1390 aa17.27■□□□□ 0.35
IFT88-205ENST00000470695 WASLO00401 505 aaPredicted RBP17.26■□□□□ 0.35
IFT88-205ENST00000470695 CDK19Q9BWU1 502 aa17.26■□□□□ 0.35
IFT88-205ENST00000470695 NINLQ9Y2I6 1382 aa17.26■□□□□ 0.35
IFT88-205ENST00000470695 SRPK2P78362 688 aaKnown RBP17.24■□□□□ 0.35
IFT88-205ENST00000470695 MYOM1P52179 1685 aa17.23■□□□□ 0.35
IFT88-205ENST00000470695 NCOA3Q9Y6Q9 1424 aa17.23■□□□□ 0.35
IFT88-205ENST00000470695 CABP2Q9NPB3 220 aa17.23■□□□□ 0.35
IFT88-205ENST00000470695 PANK3Q9H999 370 aa17.21■□□□□ 0.35
IFT88-205ENST00000470695 ADGRL3Q9HAR2 1447 aa17.21■□□□□ 0.34
IFT88-205ENST00000470695 PROSER2Q86WR7 435 aaPredicted RBP17.2■□□□□ 0.34
IFT88-205ENST00000470695 STRCP1A6NGW2 1772 aa17.2■□□□□ 0.34
IFT88-205ENST00000470695 PER1O15534 1290 aaPredicted RBP17.19■□□□□ 0.34
IFT88-205ENST00000470695 CDC42BPGQ6DT37 1551 aa17.19■□□□□ 0.34
IFT88-205ENST00000470695 NALCNQ8IZF0 1738 aa17.18■□□□□ 0.34
IFT88-205ENST00000470695 ANKARQ7Z5J8 1434 aa17.17■□□□□ 0.34
IFT88-205ENST00000470695 TMC1Q8TDI8 760 aa17.17■□□□□ 0.34
IFT88-205ENST00000470695 NUDT16Q96DE0 195 aaKnown RBP17.17■□□□□ 0.34
IFT88-205ENST00000470695 SLC12A5Q9H2X9 1139 aa17.17■□□□□ 0.34
IFT88-205ENST00000470695 CCDC61Q9Y6R9 512 aa17.17■□□□□ 0.34
IFT88-205ENST00000470695 ATP7BP35670 1465 aa17.17■□□□□ 0.34
IFT88-205ENST00000470695 ANKRD36BQ8N2N9 1353 aa17.16■□□□□ 0.34
IFT88-205ENST00000470695 ANP32CO43423 234 aa17.16■□□□□ 0.34
IFT88-205ENST00000470695 FMN2Q9NZ56 1722 aa17.16■□□□□ 0.34
IFT88-205ENST00000470695 TMEM94Q12767 1356 aa17.15■□□□□ 0.34
IFT88-205ENST00000470695 C19orf44Q9H6X5 657 aa17.14■□□□□ 0.33
IFT88-205ENST00000470695 TERF2IPQ9NYB0 399 aa17.14■□□□□ 0.33
IFT88-205ENST00000470695 ZNF335Q9H4Z2 1342 aaPredicted RBP17.14■□□□□ 0.33
IFT88-205ENST00000470695 PRR36Q9H6K5 1346 aa17.14■□□□□ 0.33
IFT88-205ENST00000470695 DCCP43146 1447 aa17.13■□□□□ 0.33
IFT88-205ENST00000470695 PPIP5K1Q6PFW1 1433 aa17.13■□□□□ 0.33
IFT88-205ENST00000470695 CABP1Q9NZU7 370 aa17.13■□□□□ 0.33
IFT88-205ENST00000470695 KNSTRNQ9Y448 316 aa17.13■□□□□ 0.33
IFT88-205ENST00000470695 TOPAZ1Q8N9V7 1692 aa17.13■□□□□ 0.33
IFT88-205ENST00000470695 NPC1L1Q9UHC9 1359 aa17.13■□□□□ 0.33
IFT88-205ENST00000470695 LRRC7Q96NW7 1537 aa17.12■□□□□ 0.33
IFT88-205ENST00000470695 USP32Q8NFA0 1604 aa17.12■□□□□ 0.33
IFT88-205ENST00000470695 PLEKHG3A1L390 1219 aa17.12■□□□□ 0.33
IFT88-205ENST00000470695 C14orf37Q86TY3 774 aa17.12■□□□□ 0.33
IFT88-205ENST00000470695 MIER1Q8N108 512 aa17.12■□□□□ 0.33
IFT88-205ENST00000470695 ITSN1Q15811 1721 aa17.12■□□□□ 0.33
IFT88-205ENST00000470695 KTN1Q86UP2 1357 aaKnown RBP17.12■□□□□ 0.33
IFT88-205ENST00000470695 CD163L1Q9NR16 1453 aa17.12■□□□□ 0.33
IFT88-205ENST00000470695 HDGFL2Q7Z4V5 671 aaPredicted RBP17.11■□□□□ 0.33
IFT88-205ENST00000470695 CARD14Q9BXL6 1004 aa17.11■□□□□ 0.33
IFT88-205ENST00000470695 RBM33Q96EV2 1170 aaKnown RBP17.1■□□□□ 0.33
IFT88-205ENST00000470695 A0A1W2PP64 1363 aa17.1■□□□□ 0.33
IFT88-205ENST00000470695 CPSF1Q10570 1443 aaKnown RBP17.1■□□□□ 0.33
IFT88-205ENST00000470695 ZNF692Q9BU19 519 aaPredicted RBP17.09■□□□□ 0.33
IFT88-205ENST00000470695 PRKRIP1Q9H875 184 aaPredicted RBP17.09■□□□□ 0.33
IFT88-205ENST00000470695 AMER1Q5JTC6 1135 aaPredicted RBP17.08■□□□□ 0.32
IFT88-205ENST00000470695 XIRP1Q702N8 1843 aaKnown RBP17.07■□□□□ 0.32
IFT88-205ENST00000470695 NSD3Q9BZ95 1437 aa17.07■□□□□ 0.32
IFT88-205ENST00000470695 MSH6P52701 1360 aa17.07■□□□□ 0.32
IFT88-205ENST00000470695 RALBP1Q15311 655 aa17.07■□□□□ 0.32
IFT88-205ENST00000470695 POLR3AO14802 1390 aaPredicted RBP17.06■□□□□ 0.32
IFT88-205ENST00000470695 ATF3P18847 181 aa17.06■□□□□ 0.32
IFT88-205ENST00000470695 CADPS2Q86UW7 1296 aa17.06■□□□□ 0.32
IFT88-205ENST00000470695 AKAP12Q02952 1782 aa17.06■□□□□ 0.32
IFT88-205ENST00000470695 NSD2O96028 1365 aa17.05■□□□□ 0.32
IFT88-205ENST00000470695 CGNL1Q0VF96 1302 aa17.05■□□□□ 0.32
IFT88-205ENST00000470695 NUTM2FA1L443 756 aa17.05■□□□□ 0.32
IFT88-205ENST00000470695 CCER2I3L3R5 266 aa17.05■□□□□ 0.32
IFT88-205ENST00000470695 RGPD8O14715 1765 aaPredicted RBP17.05■□□□□ 0.32
IFT88-205ENST00000470695 EDC4Q6P2E9 1401 aaKnown RBP17.04■□□□□ 0.32
IFT88-205ENST00000470695 PARD3Q8TEW0 1356 aa17.04■□□□□ 0.32
IFT88-205ENST00000470695 LTBP4Q8N2S1 1624 aa17.04■□□□□ 0.32
IFT88-205ENST00000470695 ACEP12821 1306 aa17.04■□□□□ 0.32
IFT88-205ENST00000470695 MON2Q7Z3U7 1717 aa17.04■□□□□ 0.32
IFT88-205ENST00000470695 MST1RQ04912 1400 aa17.03■□□□□ 0.32
IFT88-205ENST00000470695 BRD4O60885 1362 aaPredicted RBP17.02■□□□□ 0.32
IFT88-205ENST00000470695 C1orf167Q5SNV9 1468 aa17.02■□□□□ 0.32
IFT88-205ENST00000470695 PHF8Q9UPP1 1060 aa17.02■□□□□ 0.32
IFT88-205ENST00000470695 CC2D1BQ5T0F9 858 aaKnown RBP17.01■□□□□ 0.31
IFT88-205ENST00000470695 USP6P35125 1406 aa17.01■□□□□ 0.31
IFT88-205ENST00000470695 NGDNQ8NEJ9 315 aaKnown RBP17■□□□□ 0.31
IFT88-205ENST00000470695 KIF1AQ12756 1690 aa17■□□□□ 0.31
IFT88-205ENST00000470695 MYBBP1AQ9BQG0 1328 aaKnown RBP16.99■□□□□ 0.31
IFT88-205ENST00000470695 SSH2Q76I76 1423 aa16.99■□□□□ 0.31
IFT88-205ENST00000470695 ESCO1Q5FWF5 840 aa16.99■□□□□ 0.31
IFT88-205ENST00000470695 PMFBP1Q8TBY8 1022 aa16.99■□□□□ 0.31
IFT88-205ENST00000470695 NRKQ7Z2Y5 1582 aa16.98■□□□□ 0.31
IFT88-205ENST00000470695 FYB1O15117 783 aa16.98■□□□□ 0.31
IFT88-205ENST00000470695 TTC21AQ8NDW8 1320 aa16.97■□□□□ 0.31
IFT88-205ENST00000470695 TTC21BQ7Z4L5 1316 aa16.96■□□□□ 0.31
IFT88-205ENST00000470695 KIF20BQ96Q89 1820 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms