RNA–Protein interactions for RNA: ENST00000470637.1

ABCD4-206, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-206ENST00000470637 PCGF6Q9BYE7 350 aa16.27■□□□□ 0.2
ABCD4-206ENST00000470637 KDM2AQ9Y2K7 1162 aa16.27■□□□□ 0.2
ABCD4-206ENST00000470637 LRP6O75581 1613 aa16.27■□□□□ 0.19
ABCD4-206ENST00000470637 NUTM2FA1L443 756 aa16.26■□□□□ 0.19
ABCD4-206ENST00000470637 YTHDC2Q9H6S0 1430 aaKnown RBP16.26■□□□□ 0.19
ABCD4-206ENST00000470637 NRXN1Q9ULB1 1477 aa16.25■□□□□ 0.19
ABCD4-206ENST00000470637 MEX3CQ5U5Q3 659 aaKnown RBP16.25■□□□□ 0.19
ABCD4-206ENST00000470637 DCAF11Q8TEB1 546 aa16.25■□□□□ 0.19
ABCD4-206ENST00000470637 NHSL1Q5SYE7 1610 aa16.25■□□□□ 0.19
ABCD4-206ENST00000470637 TECPR2O15040 1411 aa16.25■□□□□ 0.19
ABCD4-206ENST00000470637 MYOM2P54296 1465 aa16.24■□□□□ 0.19
ABCD4-206ENST00000470637 ESCO1Q5FWF5 840 aa16.24■□□□□ 0.19
ABCD4-206ENST00000470637 SHPRHQ149N8 1683 aa16.24■□□□□ 0.19
ABCD4-206ENST00000470637 SIRT1Q96EB6 747 aa16.23■□□□□ 0.19
ABCD4-206ENST00000470637 DHX57Q6P158 1386 aaKnown RBP16.23■□□□□ 0.19
ABCD4-206ENST00000470637 SOS2Q07890 1332 aaPredicted RBP16.21■□□□□ 0.19
ABCD4-206ENST00000470637 FOXO3O43524 673 aa16.2■□□□□ 0.18
ABCD4-206ENST00000470637 SAFB2Q14151 953 aaKnown RBP eCLIP16.2■□□□□ 0.18
ABCD4-206ENST00000470637 PRAM1Q96QH2 718 aa16.2■□□□□ 0.18
ABCD4-206ENST00000470637 PNPLA6Q8IY17 1366 aa16.2■□□□□ 0.18
ABCD4-206ENST00000470637 CDC42BPGQ6DT37 1551 aa16.2■□□□□ 0.18
ABCD4-206ENST00000470637 KNDC1Q76NI1 1749 aa16.19■□□□□ 0.18
ABCD4-206ENST00000470637 XPCQ01831 940 aaPredicted RBP16.18■□□□□ 0.18
ABCD4-206ENST00000470637 TRAK1Q9UPV9 953 aa16.18■□□□□ 0.18
ABCD4-206ENST00000470637 LAMC1P11047 1609 aa16.17■□□□□ 0.18
ABCD4-206ENST00000470637 ZNF772Q68DY9 489 aaPredicted RBP16.17■□□□□ 0.18
ABCD4-206ENST00000470637 POGKQ9P215 609 aa16.17■□□□□ 0.18
ABCD4-206ENST00000470637 STAC3Q96MF2 364 aa16.16■□□□□ 0.18
ABCD4-206ENST00000470637 NPHP3Q7Z494 1330 aa16.16■□□□□ 0.18
ABCD4-206ENST00000470637 ADAMTS2O95450 1211 aa16.15■□□□□ 0.18
ABCD4-206ENST00000470637 C8orf37Q96NL8 207 aa16.15■□□□□ 0.18
ABCD4-206ENST00000470637 ADGRB1O14514 1584 aa16.14■□□□□ 0.17
ABCD4-206ENST00000470637 AFF2P51816 1311 aa16.14■□□□□ 0.17
ABCD4-206ENST00000470637 PXDNQ92626 1479 aa16.12■□□□□ 0.17
ABCD4-206ENST00000470637 FMN2Q9NZ56 1722 aa16.12■□□□□ 0.17
ABCD4-206ENST00000470637 HIRIP3Q9BW71 556 aaPredicted RBP16.12■□□□□ 0.17
ABCD4-206ENST00000470637 DLC1Q96QB1 1528 aa16.11■□□□□ 0.17
ABCD4-206ENST00000470637 NGLY1Q96IV0 654 aa16.11■□□□□ 0.17
ABCD4-206ENST00000470637 RXRBP28702 533 aa16.1■□□□□ 0.17
ABCD4-206ENST00000470637 KRT28Q7Z3Y7 464 aa16.1■□□□□ 0.17
ABCD4-206ENST00000470637 PHF8Q9UPP1 1060 aa16.1■□□□□ 0.17
ABCD4-206ENST00000470637 MINK1Q8N4C8 1332 aaPredicted RBP16.1■□□□□ 0.17
ABCD4-206ENST00000470637 SIN3AQ96ST3 1273 aa16.09■□□□□ 0.17
ABCD4-206ENST00000470637 PMFBP1Q8TBY8 1022 aa16.08■□□□□ 0.16
ABCD4-206ENST00000470637 QTRT2Q9H974 415 aaKnown RBP16.08■□□□□ 0.16
ABCD4-206ENST00000470637 RGPD8O14715 1765 aaPredicted RBP16.08■□□□□ 0.16
ABCD4-206ENST00000470637 NBPF1Q3BBV0 1214 aa16.07■□□□□ 0.16
ABCD4-206ENST00000470637 SPATA31A3Q5VYP0 1347 aa16.07■□□□□ 0.16
ABCD4-206ENST00000470637 COL22A1Q8NFW1 1626 aaPredicted RBP16.05■□□□□ 0.16
ABCD4-206ENST00000470637 PRR36Q9H6K5 1346 aa16.05■□□□□ 0.16
ABCD4-206ENST00000470637 WASLO00401 505 aaPredicted RBP16.05■□□□□ 0.16
ABCD4-206ENST00000470637 PSME1Q06323 249 aa16.05■□□□□ 0.16
ABCD4-206ENST00000470637 USP21Q9UK80 565 aa16.05■□□□□ 0.16
ABCD4-206ENST00000470637 KIF1AQ12756 1690 aa16.05■□□□□ 0.16
ABCD4-206ENST00000470637 PLEKHG5O94827 1062 aa16.04■□□□□ 0.16
ABCD4-206ENST00000470637 NEUROD1Q13562 356 aa16.04■□□□□ 0.16
ABCD4-206ENST00000470637 FNBP4Q8N3X1 1017 aaPredicted RBP16.04■□□□□ 0.16
ABCD4-206ENST00000470637 L3MBTL2Q969R5 705 aa16.04■□□□□ 0.16
ABCD4-206ENST00000470637 USP32Q8NFA0 1604 aa16.04■□□□□ 0.16
ABCD4-206ENST00000470637 ADGRB2O60241 1585 aa16.03■□□□□ 0.16
ABCD4-206ENST00000470637 ANKARQ7Z5J8 1434 aa16.02■□□□□ 0.16
ABCD4-206ENST00000470637 RBM6P78332 1123 aaKnown RBP16.02■□□□□ 0.16
ABCD4-206ENST00000470637 LMOD2Q6P5Q4 547 aa16.02■□□□□ 0.16
ABCD4-206ENST00000470637 CABLES1Q8TDN4 633 aa16.02■□□□□ 0.16
ABCD4-206ENST00000470637 CDK19Q9BWU1 502 aa16■□□□□ 0.15
ABCD4-206ENST00000470637 ARHGEF28Q8N1W1 1705 aaKnown RBP15.99■□□□□ 0.15
ABCD4-206ENST00000470637 NUDT16Q96DE0 195 aaKnown RBP15.99■□□□□ 0.15
ABCD4-206ENST00000470637 TRPC5Q9UL62 973 aaPredicted RBP15.99■□□□□ 0.15
ABCD4-206ENST00000470637 TNS3Q68CZ2 1445 aa15.99■□□□□ 0.15
ABCD4-206ENST00000470637 SBNO1A3KN83 1393 aa15.99■□□□□ 0.15
ABCD4-206ENST00000470637 TULP4Q9NRJ4 1543 aa15.99■□□□□ 0.15
ABCD4-206ENST00000470637 HAP1P54257 671 aaPredicted RBP15.98■□□□□ 0.15
ABCD4-206ENST00000470637 EIF3AQ14152 1382 aaKnown RBP15.98■□□□□ 0.15
ABCD4-206ENST00000470637 BCL9LQ86UU0 1499 aa15.97■□□□□ 0.15
ABCD4-206ENST00000470637 CDK12Q9NYV4 1490 aaPredicted RBP15.97■□□□□ 0.15
ABCD4-206ENST00000470637 KIAA1210Q9ULL0 1709 aa15.97■□□□□ 0.15
ABCD4-206ENST00000470637 NGDNQ8NEJ9 315 aaKnown RBP15.97■□□□□ 0.15
ABCD4-206ENST00000470637 UPF1Q92900 1129 aaKnown RBP eCLIP15.97■□□□□ 0.15
ABCD4-206ENST00000470637 RGS12O14924 1447 aa15.96■□□□□ 0.15
ABCD4-206ENST00000470637 GPRASP1Q5JY77 1395 aa15.96■□□□□ 0.15
ABCD4-206ENST00000470637 ATRNO75882 1429 aa15.94■□□□□ 0.14
ABCD4-206ENST00000470637 MARF1Q9Y4F3 1742 aaKnown RBP15.94■□□□□ 0.14
ABCD4-206ENST00000470637 PAK3O75914 559 aaPredicted RBP15.94■□□□□ 0.14
ABCD4-206ENST00000470637 ARHGEF10O15013 1369 aa15.94■□□□□ 0.14
ABCD4-206ENST00000470637 ATP7BP35670 1465 aa15.93■□□□□ 0.14
ABCD4-206ENST00000470637 UNC5CLQ8IV45 518 aa15.93■□□□□ 0.14
ABCD4-206ENST00000470637 GJD4Q96KN9 370 aaPredicted RBP15.93■□□□□ 0.14
ABCD4-206ENST00000470637 CCDC61Q9Y6R9 512 aa15.93■□□□□ 0.14
ABCD4-206ENST00000470637 CENPJQ9HC77 1338 aaPredicted RBP15.93■□□□□ 0.14
ABCD4-206ENST00000470637 FAM83GA6ND36 823 aa15.92■□□□□ 0.14
ABCD4-206ENST00000470637 CCER1Q8TC90 406 aaPredicted RBP15.92■□□□□ 0.14
ABCD4-206ENST00000470637 SLIT2O94813 1529 aa15.92■□□□□ 0.14
ABCD4-206ENST00000470637 TRPM3Q9HCF6 1732 aaPredicted RBP15.91■□□□□ 0.14
ABCD4-206ENST00000470637 TONSLQ96HA7 1378 aa15.91■□□□□ 0.14
ABCD4-206ENST00000470637 NBPF8Q3BBV2 869 aa15.91■□□□□ 0.14
ABCD4-206ENST00000470637 CABP2Q9NPB3 220 aa15.91■□□□□ 0.14
ABCD4-206ENST00000470637 ACEP12821 1306 aa15.91■□□□□ 0.14
ABCD4-206ENST00000470637 SRPK2P78362 688 aaKnown RBP15.9■□□□□ 0.14
ABCD4-206ENST00000470637 PLEKHG3A1L390 1219 aa15.89■□□□□ 0.13
ABCD4-206ENST00000470637 TRPM1Q7Z4N2 1603 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms